Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608784
Identifier: 86608784
GI number: 86608784
Start: 1372687
End: 1373607
Strand: Direct
Name: 86608784
Synonym: CYB_1309
Alternate gene names: NA
Gene position: 1372687-1373607 (Clockwise)
Preceding gene: 86608774
Following gene: 86608785
Centisome position: 45.06
GC content: 60.69
Gene sequence:
>921_bases ATGAACACAACCCAAGACCCAACCGCCTCTCGTCTCGACCTTCTCCCCCCGGGAGAGGGAGGAACAACGGCCAACCTCCT GCTGGAGTGGGATCCCGTCCTGCAGCGCAAGTTCCAGCAGCTTGTCCAGATCTTCGCCGAGATGGAGCAGGTCTTGGTGG CCTACTCTGGGGGGGTTGATAGCAGCCTGGTGGCCAAGTTGGCCTGCGATCAGCTGGGGGAGCGGGCCCTGGCTGTCACC GCTGCTTCTCCTTCGCTGCTGCCCGAAGATTTGGAAGAAGCAATTCAGCAGGCTCGGCAAATCGGGATCCGCCATCAGAT CGTCGAAACCCACGAGCTGGAGGATCCGAGCTACGCTGCCAACCCTGTTAACCGGTGTTACTTCTGCAAAAGTCACTTGC ACGATACCTTGCGCCTGTTGGCCCAAGCCCAGGGATATAACCATGTGGTGGATGGTCTCAATGCCGACGATCTGGCCGAT TACCGACCGGGGACACAGGCAGCTCGGGAGCGCGGCGTGCGTTCCCCTTTGGCGGAGGTGGGGATGAGCAAGCTGGAGGT GCGGCAATTGTCTCGCCACCTGGGGCTGTCTTGGTGGGATAAACCGGCCCAACCCTGCCTCAGCTCTCGCTTTCCCTACG GGGAGGCAATCACCCCTGAGAAGCTGCGTCGGGTGGGAGCGGCGGAGCGCTACTTGCGCAGCTTGGGTTGGCGGCAGGTC AGGGTGCGCTCGGAGAAGGACACCGCCCGCATCGAACTTCCTCCGGATCAGATCGTGGAGTTTGTGCAGAAAACCAATCT GGAAGCGCTGGTCAAGGCCCTGCAATCCTTCGGCTATCTCTATGTCAGTCTCGATTTGGAGGGCTACCGCAGCGGCAAGC TCAACCGAGTCCTCAACCTTTCCCAGTTGGCCACAAGCTAG
Upstream 100 bases:
>100_bases GGGGATCCCTGCCCCTGATAGCAACCGGCTTTTCTCCTGCCGGCGGTGGCGAGACGGTGCCCTTGCTTGGTTCTCCAAAC GTTTGGCATCTCCTGGCTTC
Downstream 100 bases:
>100_bases CGGGCTGGGGAAGCCGTAGGGGATCTGTGTTGAAGTTTTGCGCCGGGTGATTATGAGAGGGTTGCGGTTGCTCTGGCTCT GCTTGGGGGTGCTGGGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVDSSLVAKLACDQLGERALAVT AASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAANPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLAD YRPGTQAARERGVRSPLAEVGMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNLSQLATS
Sequences:
>Translated_306_residues MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVDSSLVAKLACDQLGERALAVT AASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAANPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLAD YRPGTQAARERGVRSPLAEVGMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNLSQLATS >Mature_306_residues MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVDSSLVAKLACDQLGERALAVT AASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAANPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLAD YRPGTQAARERGVRSPLAEVGMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNLSQLATS
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 34131; Mature: 34131
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVD CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSLVAKLACDQLGERALAVTAASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAA HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLADYRPGTQAARERGVRSPLAEV CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCHHHHHHCCCCCHHHHH GMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV CHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHE RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNL EEECCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHH SQLATS HHHHCC >Mature Secondary Structure MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVD CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSLVAKLACDQLGERALAVTAASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAA HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLADYRPGTQAARERGVRSPLAEV CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCHHHHHHCCCCCHHHHH GMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV CHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHE RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNL EEECCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHH SQLATS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]