Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608784

Identifier: 86608784

GI number: 86608784

Start: 1372687

End: 1373607

Strand: Direct

Name: 86608784

Synonym: CYB_1309

Alternate gene names: NA

Gene position: 1372687-1373607 (Clockwise)

Preceding gene: 86608774

Following gene: 86608785

Centisome position: 45.06

GC content: 60.69

Gene sequence:

>921_bases
ATGAACACAACCCAAGACCCAACCGCCTCTCGTCTCGACCTTCTCCCCCCGGGAGAGGGAGGAACAACGGCCAACCTCCT
GCTGGAGTGGGATCCCGTCCTGCAGCGCAAGTTCCAGCAGCTTGTCCAGATCTTCGCCGAGATGGAGCAGGTCTTGGTGG
CCTACTCTGGGGGGGTTGATAGCAGCCTGGTGGCCAAGTTGGCCTGCGATCAGCTGGGGGAGCGGGCCCTGGCTGTCACC
GCTGCTTCTCCTTCGCTGCTGCCCGAAGATTTGGAAGAAGCAATTCAGCAGGCTCGGCAAATCGGGATCCGCCATCAGAT
CGTCGAAACCCACGAGCTGGAGGATCCGAGCTACGCTGCCAACCCTGTTAACCGGTGTTACTTCTGCAAAAGTCACTTGC
ACGATACCTTGCGCCTGTTGGCCCAAGCCCAGGGATATAACCATGTGGTGGATGGTCTCAATGCCGACGATCTGGCCGAT
TACCGACCGGGGACACAGGCAGCTCGGGAGCGCGGCGTGCGTTCCCCTTTGGCGGAGGTGGGGATGAGCAAGCTGGAGGT
GCGGCAATTGTCTCGCCACCTGGGGCTGTCTTGGTGGGATAAACCGGCCCAACCCTGCCTCAGCTCTCGCTTTCCCTACG
GGGAGGCAATCACCCCTGAGAAGCTGCGTCGGGTGGGAGCGGCGGAGCGCTACTTGCGCAGCTTGGGTTGGCGGCAGGTC
AGGGTGCGCTCGGAGAAGGACACCGCCCGCATCGAACTTCCTCCGGATCAGATCGTGGAGTTTGTGCAGAAAACCAATCT
GGAAGCGCTGGTCAAGGCCCTGCAATCCTTCGGCTATCTCTATGTCAGTCTCGATTTGGAGGGCTACCGCAGCGGCAAGC
TCAACCGAGTCCTCAACCTTTCCCAGTTGGCCACAAGCTAG

Upstream 100 bases:

>100_bases
GGGGATCCCTGCCCCTGATAGCAACCGGCTTTTCTCCTGCCGGCGGTGGCGAGACGGTGCCCTTGCTTGGTTCTCCAAAC
GTTTGGCATCTCCTGGCTTC

Downstream 100 bases:

>100_bases
CGGGCTGGGGAAGCCGTAGGGGATCTGTGTTGAAGTTTTGCGCCGGGTGATTATGAGAGGGTTGCGGTTGCTCTGGCTCT
GCTTGGGGGTGCTGGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVDSSLVAKLACDQLGERALAVT
AASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAANPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLAD
YRPGTQAARERGVRSPLAEVGMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV
RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNLSQLATS

Sequences:

>Translated_306_residues
MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVDSSLVAKLACDQLGERALAVT
AASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAANPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLAD
YRPGTQAARERGVRSPLAEVGMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV
RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNLSQLATS
>Mature_306_residues
MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVDSSLVAKLACDQLGERALAVT
AASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAANPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLAD
YRPGTQAARERGVRSPLAEVGMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV
RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNLSQLATS

Specific function: Unknown

COG id: COG1606

COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0830 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005232
- InterPro:   IPR022310
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02540 NAD_synthase [H]

EC number: NA

Molecular weight: Translated: 34131; Mature: 34131

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVD
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SSLVAKLACDQLGERALAVTAASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAA
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLADYRPGTQAARERGVRSPLAEV
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCHHHHHHCCCCCHHHHH
GMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV
CHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHE
RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNL
EEECCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHH
SQLATS
HHHHCC
>Mature Secondary Structure
MNTTQDPTASRLDLLPPGEGGTTANLLLEWDPVLQRKFQQLVQIFAEMEQVLVAYSGGVD
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SSLVAKLACDQLGERALAVTAASPSLLPEDLEEAIQQARQIGIRHQIVETHELEDPSYAA
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NPVNRCYFCKSHLHDTLRLLAQAQGYNHVVDGLNADDLADYRPGTQAARERGVRSPLAEV
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCHHHHHHCCCCCHHHHH
GMSKLEVRQLSRHLGLSWWDKPAQPCLSSRFPYGEAITPEKLRRVGAAERYLRSLGWRQV
CHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHE
RVRSEKDTARIELPPDQIVEFVQKTNLEALVKALQSFGYLYVSLDLEGYRSGKLNRVLNL
EEECCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHH
SQLATS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]