Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608761
Identifier: 86608761
GI number: 86608761
Start: 1340741
End: 1342003
Strand: Direct
Name: 86608761
Synonym: CYB_1286
Alternate gene names: NA
Gene position: 1340741-1342003 (Clockwise)
Preceding gene: 86608758
Following gene: 86608762
Centisome position: 44.01
GC content: 57.32
Gene sequence:
>1263_bases ATGGCCAGCTCTGCCCTCTCCGCTTCGGAACGAGCCTTGAGCCTTTACGAGGCTCTGCCCTACCCTAATGTGCCCCTCTC GCAGACGGCCCGCAACGCCCTGCCGGAGATGTTCAAGATGAGCTATACCACGGCTCAGTACCTGCGCACCCATACCATCG TCCCGCCAGAGGGCAAGGTGTTGTTGAATGCCGGCTGTGGCTCCGGCTGGGAAACGTTGATGATGGCCGAGGCCAATCCA GGGGCCCAGATTGTTGCCTGTGATCTGTCTCCGGCTTCGGTCAAGCTTACCGAGGAACGCCTGCGCCACCACGGCTTCGC AGATGCCGAGTTTTATGTCCTCAATCTGCTGGAGCTGGAGCGTCTGGGGATCCAGTTTGATTTCATTAGCCTCAATGATG TTTTGTATTTGCTGGAGGATCCCACCGAGGGCCTGCGGGCCATGAAAAATGTCCTCAAGCCCGATGGCATCATCCGGGCC AATCTCCACAGCCGCTACCAACGGCAGGTGTTTTTCCGCCTGCAAGAGGGGTTGCAAAAGGTGGGGCAATTTGACGTTCC GCCAGCAGTAGGGGCCAAGAATGTGCGGGAGTTCATGGGATCCCTGCGAGAAGAAGTGGCCCAGGCGGTGCTCTGGAACC CGGCCAACTATGCCGAAGATGCGGCCATTATGAATAATTACCTACTCTCCAACGACAAAGGGTTCACGATCCCCGACCTG TTTCGCATGTTGCAGCAGGCGGGGTTGAGCTTTTTGAGCTTGGTGGATAGGCCCGACTGGTCGGTGGAGTCTTTGTTTAA AGAGGTGCCTGAGTTTGTGCGGCAGCGGTTGGCAACCCTCAGCATCATGGAGCGGCTGCATCTGTATGAACTCCTTCGCC CTGTCCATCGCCTCATCGACTTTTGGGCGGAGCATGCCGGCTCTTCGCCGGTGCTGCCTTGGAGTGACGAAGATTGGCTG TCGGGATCCGTACAATTCAATCCCCTGTTGATGGACAACCCCCGCTTTCGCCAGGAGTACAGCAAAGCCCTGCAAGAGAA GCGGCCCTACGAAATGCAGTGGACAGGGGCCACCCACGGGCGGATCAGCATCCCTGCCGAGAACGTGAGCTGGTTGGCGC CACTGCTTCAAGGACCAACGCCGGTTCGAGAGCTGATTCAACAGGCCGTCCAGTTGGGATCCCCAGATGAAGAACGAACA ACCGCTGAGGTGCTGACCTTCCTAACCAACCTAGAAGACTTTCTTTTTTTGATGCTGCAATAG
Upstream 100 bases:
>100_bases GGAAGCAGCAGTCATGGCAAGTTCTTCGCGGATCCCTGAGGCTGTCGCGACCAGGGCTACACTCAATCATAAATTGAACC GTTGAGCCTTTCCCCTGCCT
Downstream 100 bases:
>100_bases GCAGCTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCGATAGCATTCTGTTTGTTTCCAAAC AGAATGGCGGTATCCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MASSALSASERALSLYEALPYPNVPLSQTARNALPEMFKMSYTTAQYLRTHTIVPPEGKVLLNAGCGSGWETLMMAEANP GAQIVACDLSPASVKLTEERLRHHGFADAEFYVLNLLELERLGIQFDFISLNDVLYLLEDPTEGLRAMKNVLKPDGIIRA NLHSRYQRQVFFRLQEGLQKVGQFDVPPAVGAKNVREFMGSLREEVAQAVLWNPANYAEDAAIMNNYLLSNDKGFTIPDL FRMLQQAGLSFLSLVDRPDWSVESLFKEVPEFVRQRLATLSIMERLHLYELLRPVHRLIDFWAEHAGSSPVLPWSDEDWL SGSVQFNPLLMDNPRFRQEYSKALQEKRPYEMQWTGATHGRISIPAENVSWLAPLLQGPTPVRELIQQAVQLGSPDEERT TAEVLTFLTNLEDFLFLMLQ
Sequences:
>Translated_420_residues MASSALSASERALSLYEALPYPNVPLSQTARNALPEMFKMSYTTAQYLRTHTIVPPEGKVLLNAGCGSGWETLMMAEANP GAQIVACDLSPASVKLTEERLRHHGFADAEFYVLNLLELERLGIQFDFISLNDVLYLLEDPTEGLRAMKNVLKPDGIIRA NLHSRYQRQVFFRLQEGLQKVGQFDVPPAVGAKNVREFMGSLREEVAQAVLWNPANYAEDAAIMNNYLLSNDKGFTIPDL FRMLQQAGLSFLSLVDRPDWSVESLFKEVPEFVRQRLATLSIMERLHLYELLRPVHRLIDFWAEHAGSSPVLPWSDEDWL SGSVQFNPLLMDNPRFRQEYSKALQEKRPYEMQWTGATHGRISIPAENVSWLAPLLQGPTPVRELIQQAVQLGSPDEERT TAEVLTFLTNLEDFLFLMLQ >Mature_419_residues ASSALSASERALSLYEALPYPNVPLSQTARNALPEMFKMSYTTAQYLRTHTIVPPEGKVLLNAGCGSGWETLMMAEANPG AQIVACDLSPASVKLTEERLRHHGFADAEFYVLNLLELERLGIQFDFISLNDVLYLLEDPTEGLRAMKNVLKPDGIIRAN LHSRYQRQVFFRLQEGLQKVGQFDVPPAVGAKNVREFMGSLREEVAQAVLWNPANYAEDAAIMNNYLLSNDKGFTIPDLF RMLQQAGLSFLSLVDRPDWSVESLFKEVPEFVRQRLATLSIMERLHLYELLRPVHRLIDFWAEHAGSSPVLPWSDEDWLS GSVQFNPLLMDNPRFRQEYSKALQEKRPYEMQWTGATHGRISIPAENVSWLAPLLQGPTPVRELIQQAVQLGSPDEERTT AEVLTFLTNLEDFLFLMLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 47598; Mature: 47467
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSALSASERALSLYEALPYPNVPLSQTARNALPEMFKMSYTTAQYLRTHTIVPPEGKV CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LLNAGCGSGWETLMMAEANPGAQIVACDLSPASVKLTEERLRHHGFADAEFYVLNLLELE EEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH RLGIQFDFISLNDVLYLLEDPTEGLRAMKNVLKPDGIIRANLHSRYQRQVFFRLQEGLQK HHCCEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHH VGQFDVPPAVGAKNVREFMGSLREEVAQAVLWNPANYAEDAAIMNNYLLSNDKGFTIPDL HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH FRMLQQAGLSFLSLVDRPDWSVESLFKEVPEFVRQRLATLSIMERLHLYELLRPVHRLID HHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWAEHAGSSPVLPWSDEDWLSGSVQFNPLLMDNPRFRQEYSKALQEKRPYEMQWTGATHG HHHHHCCCCCCCCCCCCCCCCCCEEECCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCC RISIPAENVSWLAPLLQGPTPVRELIQQAVQLGSPDEERTTAEVLTFLTNLEDFLFLMLQ EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASSALSASERALSLYEALPYPNVPLSQTARNALPEMFKMSYTTAQYLRTHTIVPPEGKV CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LLNAGCGSGWETLMMAEANPGAQIVACDLSPASVKLTEERLRHHGFADAEFYVLNLLELE EEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH RLGIQFDFISLNDVLYLLEDPTEGLRAMKNVLKPDGIIRANLHSRYQRQVFFRLQEGLQK HHCCEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHH VGQFDVPPAVGAKNVREFMGSLREEVAQAVLWNPANYAEDAAIMNNYLLSNDKGFTIPDL HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH FRMLQQAGLSFLSLVDRPDWSVESLFKEVPEFVRQRLATLSIMERLHLYELLRPVHRLID HHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWAEHAGSSPVLPWSDEDWLSGSVQFNPLLMDNPRFRQEYSKALQEKRPYEMQWTGATHG HHHHHCCCCCCCCCCCCCCCCCCEEECCEEECCCHHHHHHHHHHHHCCCCEEEECCCCCC RISIPAENVSWLAPLLQGPTPVRELIQQAVQLGSPDEERTTAEVLTFLTNLEDFLFLMLQ EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]