Click here to switch to the map view.

The map label for this gene is ygeT [C]

Identifier: 86608747

GI number: 86608747

Start: 1329387

End: 1330193

Strand: Direct

Name: ygeT [C]

Synonym: CYB_1271

Alternate gene names: 86608747

Gene position: 1329387-1330193 (Clockwise)

Preceding gene: 86608746

Following gene: 86608748

Centisome position: 43.63

GC content: 60.47

Gene sequence:

>807_bases
ATGGATCTGCACCATCTGCACACTTACATTCGTCCCCAACAGCTTGAGGACTTGACCGCCTGGGATCCCGGCTGGAACTG
GCTGGCCGGGGGGACTTGGCTCTTCTCCCAGCCGCAACCCCACCTGCGGGGACTGGTCGATTTGCATCCTCTGGACTGGA
ACGAGCTGGAAATCAGTGCAGAAGGGTTAAAACTGGGGGCAACCTGTACCTTCCAGCAACTGTTGCAATACGATTGGCCA
CCCCATTGGCCAGGGATCCGCGCCCTGTGCGAGGGAATGGCGTCTTTGGCCTCTTTTAAGGTGGCCCACTTGGCAACGAT
AGGGGGAAATCTCTGCCTGGCCCTGAGTGTCGGTGTCGTAGCACCCGTGTTGATCGCCCTTGAGGCCACCTACACGCTGA
TCGATCTGCAGGGATCCCTGCGCCACATCCCCGCTCAGGACTTTCAAACCGGCCCCCAACAAACTCTGCTGCAGCCGGGG
GAAGCCTTGCGATCCATCTGGATCCCGGCCCAACGGCTGCGCGGCCCCAGCACCTTTCAGCGGCTCGGCATCACCCAAAC
GGATCCCGCCTTGGTGATCGTCGCTGGATCCCGCGATCCCGACTCAGGCGATTATCGCTTCGGGCTCAATGCCGCCCTTT
CACCCCCACAACTGGTGCGGCTGGGATCCCGGCCCAATCCAGAACACCTTCCCCAACTTTTGGCAGAGCAAGCCCACGGC
TGGATCGCGGATTTTCGGGCCAGCGCCCTTTACCGCCAACGCATGAGTGAGGTATTGATTCGCCGCTGTATAGACATCTT
GGGCTAA

Upstream 100 bases:

>100_bases
AAGCTCTCTAGCCCCCTGAAGCCTGCAGTCTGGATCCCTGCCCAGGGTTTTTGGGGCGAAGCTACAACCCCTTGATTCCC
TTCAGCGCCTGAGAGAACCG

Downstream 100 bases:

>100_bases
TCGGGGTATTGCCCCATCCCAACAGGGGGCTGAGAACGACGTACTCATCCTGCCAAAGCTCCCGCCGCTCTGAAAGTAAA
GGTTTTAGGCGTGGGTCAGT

Product: oxidoreductase, molybdopterin-binding subunit

Products: NA

Alternate protein names: Xanthine Dehydrogenase Subunit; Molybdopterin Dehydrogenase; Xanthine Dehydrogenase Family Protein Medium Subunit

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MDLHHLHTYIRPQQLEDLTAWDPGWNWLAGGTWLFSQPQPHLRGLVDLHPLDWNELEISAEGLKLGATCTFQQLLQYDWP
PHWPGIRALCEGMASLASFKVAHLATIGGNLCLALSVGVVAPVLIALEATYTLIDLQGSLRHIPAQDFQTGPQQTLLQPG
EALRSIWIPAQRLRGPSTFQRLGITQTDPALVIVAGSRDPDSGDYRFGLNAALSPPQLVRLGSRPNPEHLPQLLAEQAHG
WIADFRASALYRQRMSEVLIRRCIDILG

Sequences:

>Translated_268_residues
MDLHHLHTYIRPQQLEDLTAWDPGWNWLAGGTWLFSQPQPHLRGLVDLHPLDWNELEISAEGLKLGATCTFQQLLQYDWP
PHWPGIRALCEGMASLASFKVAHLATIGGNLCLALSVGVVAPVLIALEATYTLIDLQGSLRHIPAQDFQTGPQQTLLQPG
EALRSIWIPAQRLRGPSTFQRLGITQTDPALVIVAGSRDPDSGDYRFGLNAALSPPQLVRLGSRPNPEHLPQLLAEQAHG
WIADFRASALYRQRMSEVLIRRCIDILG
>Mature_268_residues
MDLHHLHTYIRPQQLEDLTAWDPGWNWLAGGTWLFSQPQPHLRGLVDLHPLDWNELEISAEGLKLGATCTFQQLLQYDWP
PHWPGIRALCEGMASLASFKVAHLATIGGNLCLALSVGVVAPVLIALEATYTLIDLQGSLRHIPAQDFQTGPQQTLLQPG
EALRSIWIPAQRLRGPSTFQRLGITQTDPALVIVAGSRDPDSGDYRFGLNAALSPPQLVRLGSRPNPEHLPQLLAEQAHG
WIADFRASALYRQRMSEVLIRRCIDILG

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789231, Length=209, Percent_Identity=29.6650717703349, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29711; Mature: 29711

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLHHLHTYIRPQQLEDLTAWDPGWNWLAGGTWLFSQPQPHLRGLVDLHPLDWNELEISA
CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHCCCEECCCCCCCCEEEEE
EGLKLGATCTFQQLLQYDWPPHWPGIRALCEGMASLASFKVAHLATIGGNLCLALSVGVV
CCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
APVLIALEATYTLIDLQGSLRHIPAQDFQTGPQQTLLQPGEALRSIWIPAQRLRGPSTFQ
HHHHHHHHHHEEEEECCCCHHCCCCHHHCCCCHHHHHCHHHHHHHHHCCHHHCCCHHHHH
RLGITQTDPALVIVAGSRDPDSGDYRFGLNAALSPPQLVRLGSRPNPEHLPQLLAEQAHG
HCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
WIADFRASALYRQRMSEVLIRRCIDILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDLHHLHTYIRPQQLEDLTAWDPGWNWLAGGTWLFSQPQPHLRGLVDLHPLDWNELEISA
CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHCCCEECCCCCCCCEEEEE
EGLKLGATCTFQQLLQYDWPPHWPGIRALCEGMASLASFKVAHLATIGGNLCLALSVGVV
CCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
APVLIALEATYTLIDLQGSLRHIPAQDFQTGPQQTLLQPGEALRSIWIPAQRLRGPSTFQ
HHHHHHHHHHEEEEECCCCHHCCCCHHHCCCCHHHHHCHHHHHHHHHCCHHHCCCHHHHH
RLGITQTDPALVIVAGSRDPDSGDYRFGLNAALSPPQLVRLGSRPNPEHLPQLLAEQAHG
HCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
WIADFRASALYRQRMSEVLIRRCIDILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA