Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is engA
Identifier: 86608739
GI number: 86608739
Start: 1320403
End: 1321782
Strand: Direct
Name: engA
Synonym: CYB_1263
Alternate gene names: 86608739
Gene position: 1320403-1321782 (Clockwise)
Preceding gene: 86608737
Following gene: 86608740
Centisome position: 43.34
GC content: 61.09
Gene sequence:
>1380_bases GTGCCCCTACCTCTTGTGGCCATTGTGGGCCGCCCCAACGTGGGCAAATCCACCCTCGTCAACCGCATGGCGGGGGTGCG TTCGGCCATTGTGCACGATGAGCCCGGCGTGACCCGGGATCGTCTGTACCAGGAGGTGGAGTGGAACGGGCGCCGCTTGC GGGTGGTGGATACCGGCGGCCTGGTTTTTGGGGATGACAGCGAATTTTTACCCCACATTCGCCAGCAAGCAATGGCAGCC ATGGCCGAGGCGCAGGCCGTGATCTTCGTGGTGGATGGCCGAGAGGGACTGACACCCGCCGATGTAGAAGTGGCCGATTG GCTGCGCAAACAACCCCTGCCGGTGGTGGTGGCCGTAAACAAGTGCGAGTCGGGGCAGATGGGCCTGGCTCAGGCAGCAG CCTTTTGGGAGCTGGGGCTGGGGGATCCGATCCCCTGTTCCGGCATTCATGGCAATGGGGTAGCCGAGCTGTTGGAGGCG GTGCTGGCTCACTTGCCCGAAGTGACCGCAGAAGCCGCAGGCGAGCCAGATCCCATCGCCGTCTCGATTGTGGGACGGCC CAACGTCGGCAAATCCAGCTTGCTCAACCGCCTGGTAGGATCCGAGCGGGCCATCGTCAGCCCCATTTCCGGCACCACCC GCGATGCCATCGACACCGTGGTCACCTGGGAAGGGCAGCCCTATCGCCTCATCGATACCGCCGGCATCCGCAAAAAAAAC CGCGTGCAGTACGGCATTGAGTTCTTCAGCATCAACCGGGCCTTCAAGGCCATCCAGCGCTCGGATGCAGTGCTGCTGGT GATCGATGCTTTGGAGGGGGTTACCGAACAGGACCAGAGGCTGGCCGGGCGCATCGAAGAAGAGGGCCGCGCCTGCGTTG TCGTCGTCAACAAGTGGGATGCAGTAGAAAACAAAGATACCCACACCATCAACGAGTTCACCCGCGAGATTCGCGACAGG CTTTACTTTATTGAATGGGCGCCGCTCCTGTTTGTCAGCGCCCTCACTGGGCAACGCACCCACAAAATCTTTGAGCAGGT GAATACCGTGGTGGCCGCCCACCGCAAACGGGTTCCCACCGCTGTGGTCAACGAAGTGCTCCAGGATGCTCTTGCCTGGC AATCGCCCCCCACCAACCGCCAGGGCAAGCAGGGCAGAATTTACTACGGCACCCAGGTGGCGGATCGGCCCCCCACCTTT GTTCTGTTTGTCAACGATCCCGATTTGTTTAAGGATAACTACCGCCGCTTCCTGGAAAAGCACTTCCGGCAAAACCTGGA CTTTACCGGTACCCCCATTCGCTTTCTCTGGCGCGGCAAATCCGAGCGCTTGGTTGGGCGGGCGGTGCGAAAATTGGAGA GATCCCTGACCTCTCGTTAG
Upstream 100 bases:
>100_bases CCTGCATCCAAAGCAATGATCGAGATTGGCGGCTTTGGGCATCCGGGATCCGGAACGGCTAGGATAGATATCCCATCTCA AGTTATCGACGAGCCGAACA
Downstream 100 bases:
>100_bases GCCCTCTGGTCTACTGAAAGCCTATGGCTGTGGATCCCAACGTCAAAACCCTGGTTGACAACCGTCGCGCCCGCTTCGAG TACGACATCTTGGAGACCTA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MPLPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLVFGDDSEFLPHIRQQAMAA MAEAQAVIFVVDGREGLTPADVEVADWLRKQPLPVVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHGNGVAELLEA VLAHLPEVTAEAAGEPDPIAVSIVGRPNVGKSSLLNRLVGSERAIVSPISGTTRDAIDTVVTWEGQPYRLIDTAGIRKKN RVQYGIEFFSINRAFKAIQRSDAVLLVIDALEGVTEQDQRLAGRIEEEGRACVVVVNKWDAVENKDTHTINEFTREIRDR LYFIEWAPLLFVSALTGQRTHKIFEQVNTVVAAHRKRVPTAVVNEVLQDALAWQSPPTNRQGKQGRIYYGTQVADRPPTF VLFVNDPDLFKDNYRRFLEKHFRQNLDFTGTPIRFLWRGKSERLVGRAVRKLERSLTSR
Sequences:
>Translated_459_residues MPLPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLVFGDDSEFLPHIRQQAMAA MAEAQAVIFVVDGREGLTPADVEVADWLRKQPLPVVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHGNGVAELLEA VLAHLPEVTAEAAGEPDPIAVSIVGRPNVGKSSLLNRLVGSERAIVSPISGTTRDAIDTVVTWEGQPYRLIDTAGIRKKN RVQYGIEFFSINRAFKAIQRSDAVLLVIDALEGVTEQDQRLAGRIEEEGRACVVVVNKWDAVENKDTHTINEFTREIRDR LYFIEWAPLLFVSALTGQRTHKIFEQVNTVVAAHRKRVPTAVVNEVLQDALAWQSPPTNRQGKQGRIYYGTQVADRPPTF VLFVNDPDLFKDNYRRFLEKHFRQNLDFTGTPIRFLWRGKSERLVGRAVRKLERSLTSR >Mature_458_residues PLPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLVFGDDSEFLPHIRQQAMAAM AEAQAVIFVVDGREGLTPADVEVADWLRKQPLPVVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHGNGVAELLEAV LAHLPEVTAEAAGEPDPIAVSIVGRPNVGKSSLLNRLVGSERAIVSPISGTTRDAIDTVVTWEGQPYRLIDTAGIRKKNR VQYGIEFFSINRAFKAIQRSDAVLLVIDALEGVTEQDQRLAGRIEEEGRACVVVVNKWDAVENKDTHTINEFTREIRDRL YFIEWAPLLFVSALTGQRTHKIFEQVNTVVAAHRKRVPTAVVNEVLQDALAWQSPPTNRQGKQGRIYYGTQVADRPPTFV LFVNDPDLFKDNYRRFLEKHFRQNLDFTGTPIRFLWRGKSERLVGRAVRKLERSLTSR
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=465, Percent_Identity=38.7096774193548, Blast_Score=300, Evalue=1e-82, Organism=Escherichia coli, GI2367268, Length=115, Percent_Identity=43.4782608695652, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788919, Length=169, Percent_Identity=33.7278106508876, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17507259, Length=90, Percent_Identity=48.8888888888889, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323665, Length=206, Percent_Identity=29.126213592233, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_SYNJB (Q2JM09)
Other databases:
- EMBL: CP000240 - RefSeq: YP_477501.1 - ProteinModelPortal: Q2JM09 - SMR: Q2JM09 - STRING: Q2JM09 - GeneID: 3900997 - GenomeReviews: CP000240_GR - KEGG: cyb:CYB_1263 - TIGR: CYB_1263 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: KCEKAFD - PhylomeDB: Q2JM09 - ProtClustDB: PRK00093 - BioCyc: SSP321332:CYB_1263-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 51060; Mature: 50929
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGG CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCC LVFGDDSEFLPHIRQQAMAAMAEAQAVIFVVDGREGLTPADVEVADWLRKQPLPVVVAVN EEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEEE KCESGQMGLAQAAAFWELGLGDPIPCSGIHGNGVAELLEAVLAHLPEVTAEAAGEPDPIA CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCEE VSIVGRPNVGKSSLLNRLVGSERAIVSPISGTTRDAIDTVVTWEGQPYRLIDTAGIRKKN EEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHEEEEECCCCEEEEECCCCCCCC RVQYGIEFFSINRAFKAIQRSDAVLLVIDALEGVTEQDQRLAGRIEEEGRACVVVVNKWD CCEECCEEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCC AVENKDTHTINEFTREIRDRLYFIEWAPLLFVSALTGQRTHKIFEQVNTVVAAHRKRVPT CCCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCH AVVNEVLQDALAWQSPPTNRQGKQGRIYYGTQVADRPPTFVLFVNDPDLFKDNYRRFLEK HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEECCCCCEEEEEECCCHHHHHHHHHHHHH HFRQNLDFTGTPIRFLWRGKSERLVGRAVRKLERSLTSR HHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGG CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCC LVFGDDSEFLPHIRQQAMAAMAEAQAVIFVVDGREGLTPADVEVADWLRKQPLPVVVAVN EEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEEE KCESGQMGLAQAAAFWELGLGDPIPCSGIHGNGVAELLEAVLAHLPEVTAEAAGEPDPIA CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCEE VSIVGRPNVGKSSLLNRLVGSERAIVSPISGTTRDAIDTVVTWEGQPYRLIDTAGIRKKN EEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHEEEEECCCCEEEEECCCCCCCC RVQYGIEFFSINRAFKAIQRSDAVLLVIDALEGVTEQDQRLAGRIEEEGRACVVVVNKWD CCEECCEEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCC AVENKDTHTINEFTREIRDRLYFIEWAPLLFVSALTGQRTHKIFEQVNTVVAAHRKRVPT CCCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCH AVVNEVLQDALAWQSPPTNRQGKQGRIYYGTQVADRPPTFVLFVNDPDLFKDNYRRFLEK HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEECCCCCEEEEEECCCHHHHHHHHHHHHH HFRQNLDFTGTPIRFLWRGKSERLVGRAVRKLERSLTSR HHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA