| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608582
Identifier: 86608582
GI number: 86608582
Start: 1136813
End: 1138579
Strand: Reverse
Name: 86608582
Synonym: CYB_1104
Alternate gene names: NA
Gene position: 1138579-1136813 (Counterclockwise)
Preceding gene: 86608583
Following gene: 86608581
Centisome position: 37.37
GC content: 58.86
Gene sequence:
>1767_bases ATGCCTCCGCGCTCCTCTTCCTCCCAGAGTGGCTCTACCCCATTCCCCTTTCTGGAGGGGCGGGGTGCTGCTGCCGACGG GGCTGAGTCGAGCTTACCGCTGGGACAGCGTTTGCTGCGGGCGGGTCTGATCTCCCAATCCCAGTTGGCTCAGGCTCTGC GAGAGCAACAGCAAAACCACCTCAAGTTGGGAGAAGTGTGTCTCGAGCGCGGCTGGCTCACTCTGGCTGATCTCTACCGC TTCCTGCCCAGCCAGTCTCTTTCTCTGGGAGAGATTTTGGTGGCACTGGGCCATTTGGATTTCGAGCAATTGCGGGTTGC TCTGGCTCAACAGCGTCGCTATGGGCGGAAATTGGGGGAAATCCTCACCTGGAAAGGTTGGGTACAGCCCGCCATTTTGG ATCGCGCCTTGGATGTCCAGGTGCAACTGCAGCGGATGGCTTCCCCCAATGCGTGGGAGGCGCTGCAGCCTTTTTTGGCC AGGGATCCCAAACCCGAGGTTCAGCTTACCCCCCAAAGAGCGGCAACTCCTGGCCGAGAAGCTCTGGCCCAGGATTTGGC TGTACCCGAAGAGGCCAAGATCCCTTGCGAGGGAACAATTCAGCCATCGAGTCTCGAATCCGCAGTTGGGGGAGATCCCA TCCCTGGAACATTGGCTGCGGCGGCCTCGGATCCCTTTGCCGATGAGCCTCAACCGGCCACCTTGGCCGACTACCGCAAG CAAGTGGAAGCCTTGCAGCTACAAATCGAGCTCCAGGAACAGGAATGGGATCGGATCCTGGCCAACATGAACCAGCAGAT TGCCGATTTTCAAAACCAGTATCAGCAGCGCATTCAAAAACTGGAAGCCACCATTCGTCTCCAGCAGGCGGAGCTCCAGC ACCAGGCTACGCTGCAGCAGGATTTGCGGGTTTGGCGGGAACAACTGCAACGTCTAGAAACGGAGCTGGCCCTTGCCCGC GCTGCCGAGCAGAAGGCGCAGCGGCAGTTGCAAACCCAGCGAGATTGCTATCAGTCGGAACTGGAGCAGTTGCAAGAGCA AATCCAGATTCTGCAGAAACGCCAGTTGGACTCGGTGCCCAGCAGCGTTGTGGCTGACCTACGCGCCCAATTGGAGGCAG CGCTTCATCAAATCCAGCAGCTCCGATCGGAGCGGGATCAGTTGCAGGCCCAACTTGCCCAGCAAGCTGCAGAGTCAGAG GCTGCTCTATCCCGGCATCTGGATTCCTTCTGGCCAGAGCAGGTTGCCGCCTTGGAGCAACAGATTGCGGAGCTGAGGGC CGCTTTGCAGATGTGGCAAGAGCGCTACGCTCAGTTACAGCAAGAGCACGAGGCCCAAATGGCGCGGCTTTCCGGCTATG TTCCCCCAGAGCAGGTGGAAAGCTTACAGGTGCAGCTACAACAACTGCAAGCGGAAATGGCGCGGCTGATGGCAGCCAAC CGTGACTACGAAGCGCACATTGCCCAACTGGAGGAGCAACTACAGCAGAGCCAAGCCCTGATCCTTCAGCTCAGGACAGA ACAGGCCGAAGCCGACCAGCGCATTGTCCAACTGGAGGGATCCCTGCAAGCCCGCCAAGAAGCCTTGGAGCAAGCTCAAC AACAACTGAAAACCACGGGATCCCGCCTCAGCGCCCTTCAACAGCAGCAGGCCAACTTGACGGTGGAACTGCGAGACGCG CGAGAGCTGCTAGCGGCCTATCGGCAGAGCCTGGAGACTTTACAGGAGAATCTCAAGATTGAGCAGAAAAGTGCTCCGCA CCGCTAA
Upstream 100 bases:
>100_bases TTTCTGGTCAATGTGGCGTTGGCATCTCTTTGTGCTTTATCCTGAGGGGCGATAAGCTAAAGTACAGCAACAACACAGTC CTAAACTGGGAACTTTATTG
Downstream 100 bases:
>100_bases CGCGATCGCAACCGTCTGCTGCAGGTGAGTTACGAACAGCAAAAGCTGATCGCCGAGGCAGCGCAGGCTCAGTTGAGAGC AGCCAACTTCTCTGGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MPPRSSSSQSGSTPFPFLEGRGAAADGAESSLPLGQRLLRAGLISQSQLAQALREQQQNHLKLGEVCLERGWLTLADLYR FLPSQSLSLGEILVALGHLDFEQLRVALAQQRRYGRKLGEILTWKGWVQPAILDRALDVQVQLQRMASPNAWEALQPFLA RDPKPEVQLTPQRAATPGREALAQDLAVPEEAKIPCEGTIQPSSLESAVGGDPIPGTLAAAASDPFADEPQPATLADYRK QVEALQLQIELQEQEWDRILANMNQQIADFQNQYQQRIQKLEATIRLQQAELQHQATLQQDLRVWREQLQRLETELALAR AAEQKAQRQLQTQRDCYQSELEQLQEQIQILQKRQLDSVPSSVVADLRAQLEAALHQIQQLRSERDQLQAQLAQQAAESE AALSRHLDSFWPEQVAALEQQIAELRAALQMWQERYAQLQQEHEAQMARLSGYVPPEQVESLQVQLQQLQAEMARLMAAN RDYEAHIAQLEEQLQQSQALILQLRTEQAEADQRIVQLEGSLQARQEALEQAQQQLKTTGSRLSALQQQQANLTVELRDA RELLAAYRQSLETLQENLKIEQKSAPHR
Sequences:
>Translated_588_residues MPPRSSSSQSGSTPFPFLEGRGAAADGAESSLPLGQRLLRAGLISQSQLAQALREQQQNHLKLGEVCLERGWLTLADLYR FLPSQSLSLGEILVALGHLDFEQLRVALAQQRRYGRKLGEILTWKGWVQPAILDRALDVQVQLQRMASPNAWEALQPFLA RDPKPEVQLTPQRAATPGREALAQDLAVPEEAKIPCEGTIQPSSLESAVGGDPIPGTLAAAASDPFADEPQPATLADYRK QVEALQLQIELQEQEWDRILANMNQQIADFQNQYQQRIQKLEATIRLQQAELQHQATLQQDLRVWREQLQRLETELALAR AAEQKAQRQLQTQRDCYQSELEQLQEQIQILQKRQLDSVPSSVVADLRAQLEAALHQIQQLRSERDQLQAQLAQQAAESE AALSRHLDSFWPEQVAALEQQIAELRAALQMWQERYAQLQQEHEAQMARLSGYVPPEQVESLQVQLQQLQAEMARLMAAN RDYEAHIAQLEEQLQQSQALILQLRTEQAEADQRIVQLEGSLQARQEALEQAQQQLKTTGSRLSALQQQQANLTVELRDA RELLAAYRQSLETLQENLKIEQKSAPHR >Mature_587_residues PPRSSSSQSGSTPFPFLEGRGAAADGAESSLPLGQRLLRAGLISQSQLAQALREQQQNHLKLGEVCLERGWLTLADLYRF LPSQSLSLGEILVALGHLDFEQLRVALAQQRRYGRKLGEILTWKGWVQPAILDRALDVQVQLQRMASPNAWEALQPFLAR DPKPEVQLTPQRAATPGREALAQDLAVPEEAKIPCEGTIQPSSLESAVGGDPIPGTLAAAASDPFADEPQPATLADYRKQ VEALQLQIELQEQEWDRILANMNQQIADFQNQYQQRIQKLEATIRLQQAELQHQATLQQDLRVWREQLQRLETELALARA AEQKAQRQLQTQRDCYQSELEQLQEQIQILQKRQLDSVPSSVVADLRAQLEAALHQIQQLRSERDQLQAQLAQQAAESEA ALSRHLDSFWPEQVAALEQQIAELRAALQMWQERYAQLQQEHEAQMARLSGYVPPEQVESLQVQLQQLQAEMARLMAANR DYEAHIAQLEEQLQQSQALILQLRTEQAEADQRIVQLEGSLQARQEALEQAQQQLKTTGSRLSALQQQQANLTVELRDAR ELLAAYRQSLETLQENLKIEQKSAPHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66400; Mature: 66268
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRSSSSQSGSTPFPFLEGRGAAADGAESSLPLGQRLLRAGLISQSQLAQALREQQQNH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH LKLGEVCLERGWLTLADLYRFLPSQSLSLGEILVALGHLDFEQLRVALAQQRRYGRKLGE HHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ILTWKGWVQPAILDRALDVQVQLQRMASPNAWEALQPFLARDPKPEVQLTPQRAATPGRE HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCHHCCCCCHH ALAQDLAVPEEAKIPCEGTIQPSSLESAVGGDPIPGTLAAAASDPFADEPQPATLADYRK HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHH QVEALQLQIELQEQEWDRILANMNQQIADFQNQYQQRIQKLEATIRLQQAELQHQATLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLRVWREQLQRLETELALARAAEQKAQRQLQTQRDCYQSELEQLQEQIQILQKRQLDSVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SSVVADLRAQLEAALHQIQQLRSERDQLQAQLAQQAAESEAALSRHLDSFWPEQVAALEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH QIAELRAALQMWQERYAQLQQEHEAQMARLSGYVPPEQVESLQVQLQQLQAEMARLMAAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC RDYEAHIAQLEEQLQQSQALILQLRTEQAEADQRIVQLEGSLQARQEALEQAQQQLKTTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRLSALQQQQANLTVELRDARELLAAYRQSLETLQENLKIEQKSAPHR HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PPRSSSSQSGSTPFPFLEGRGAAADGAESSLPLGQRLLRAGLISQSQLAQALREQQQNH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH LKLGEVCLERGWLTLADLYRFLPSQSLSLGEILVALGHLDFEQLRVALAQQRRYGRKLGE HHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ILTWKGWVQPAILDRALDVQVQLQRMASPNAWEALQPFLARDPKPEVQLTPQRAATPGRE HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCHHCCCCCHH ALAQDLAVPEEAKIPCEGTIQPSSLESAVGGDPIPGTLAAAASDPFADEPQPATLADYRK HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHH QVEALQLQIELQEQEWDRILANMNQQIADFQNQYQQRIQKLEATIRLQQAELQHQATLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLRVWREQLQRLETELALARAAEQKAQRQLQTQRDCYQSELEQLQEQIQILQKRQLDSVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SSVVADLRAQLEAALHQIQQLRSERDQLQAQLAQQAAESEAALSRHLDSFWPEQVAALEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH QIAELRAALQMWQERYAQLQQEHEAQMARLSGYVPPEQVESLQVQLQQLQAEMARLMAAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC RDYEAHIAQLEEQLQQSQALILQLRTEQAEADQRIVQLEGSLQARQEALEQAQQQLKTTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRLSALQQQQANLTVELRDARELLAAYRQSLETLQENLKIEQKSAPHR HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA