Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608581

Identifier: 86608581

GI number: 86608581

Start: 1136309

End: 1136788

Strand: Reverse

Name: 86608581

Synonym: CYB_1103

Alternate gene names: NA

Gene position: 1136788-1136309 (Counterclockwise)

Preceding gene: 86608582

Following gene: 86608580

Centisome position: 37.31

GC content: 60.62

Gene sequence:

>480_bases
GTGAGTTACGAACAGCAAAAGCTGATCGCCGAGGCAGCGCAGGCTCAGTTGAGAGCAGCCAACTTCTCTGGTTCAACCGC
CAAAGATGAGCCAGCACGCTTGCGTGAGCGAAACGCAGTCCTTACGGGGAGACCGGAGGAACCCGAGACCGACGCCGACA
CTCCTGAGGATACGCCGACGGATCCCTTGTTGGCAGAACTCACCCCATGGGCCAGGCATCTGTTCCAAAACTTGCAGGCA
GCGGGCTTGCTGGATCGGCCCCAGATCCAAGACATCCTCAGCCGCTGGCAACAGTCGGGGGGCAAGCTGACCGCGGTCAT
TGGCGAGTGTACCGGCCTGAAGGCAACCACGGTCGCGGTAGCGGTGCGGTTCCCGGTAGGGTGCCGGAGGCATAGCACTT
TCAAGTTCTTTGCGGATGGGGGGTATTCTGCCCGTTTGTCGGGGTGCCGCACGGTGGGAGAGCATGACTCTAGTCAATAA

Upstream 100 bases:

>100_bases
AGCGGCCTATCGGCAGAGCCTGGAGACTTTACAGGAGAATCTCAAGATTGAGCAGAAAAGTGCTCCGCACCGCTAACGCG
ATCGCAACCGTCTGCTGCAG

Downstream 100 bases:

>100_bases
TAAGCTCAACTATACTGAAAATAATGTATAATATGTTCAGTACGGATTACTACCAGTTGATCTTTCTGTTTACTTTCGAG
TCTGCCAACATGGTAGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSYEQQKLIAEAAQAQLRAANFSGSTAKDEPARLRERNAVLTGRPEEPETDADTPEDTPTDPLLAELTPWARHLFQNLQA
AGLLDRPQIQDILSRWQQSGGKLTAVIGECTGLKATTVAVAVRFPVGCRRHSTFKFFADGGYSARLSGCRTVGEHDSSQ

Sequences:

>Translated_159_residues
MSYEQQKLIAEAAQAQLRAANFSGSTAKDEPARLRERNAVLTGRPEEPETDADTPEDTPTDPLLAELTPWARHLFQNLQA
AGLLDRPQIQDILSRWQQSGGKLTAVIGECTGLKATTVAVAVRFPVGCRRHSTFKFFADGGYSARLSGCRTVGEHDSSQ
>Mature_158_residues
SYEQQKLIAEAAQAQLRAANFSGSTAKDEPARLRERNAVLTGRPEEPETDADTPEDTPTDPLLAELTPWARHLFQNLQAA
GLLDRPQIQDILSRWQQSGGKLTAVIGECTGLKATTVAVAVRFPVGCRRHSTFKFFADGGYSARLSGCRTVGEHDSSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17341; Mature: 17209

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEQQKLIAEAAQAQLRAANFSGSTAKDEPARLRERNAVLTGRPEEPETDADTPEDTPT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCCCCCC
DPLLAELTPWARHLFQNLQAAGLLDRPQIQDILSRWQQSGGKLTAVIGECTGLKATTVAV
CCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEE
AVRFPVGCRRHSTFKFFADGGYSARLSGCRTVGEHDSSQ
EEECCCCCCCCCCEEEEECCCCEEHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SYEQQKLIAEAAQAQLRAANFSGSTAKDEPARLRERNAVLTGRPEEPETDADTPEDTPT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCCCCCC
DPLLAELTPWARHLFQNLQAAGLLDRPQIQDILSRWQQSGGKLTAVIGECTGLKATTVAV
CCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEE
AVRFPVGCRRHSTFKFFADGGYSARLSGCRTVGEHDSSQ
EEECCCCCCCCCCEEEEECCCCEEHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA