Click here to switch to the map view.

The map label for this gene is 86608568

Identifier: 86608568

GI number: 86608568

Start: 1126243

End: 1126479

Strand: Reverse

Name: 86608568

Synonym: CYB_1090

Alternate gene names: NA

Gene position: 1126479-1126243 (Counterclockwise)

Preceding gene: 86608569

Following gene: 86608567

Centisome position: 36.97

GC content: 56.12

Gene sequence:

>237_bases
ATGCTGGCAGTCAAGGCTGAAAGAGCTGGGCTGAGGGCGATTGCAGTGAATCCCAACGGCAGCAGTCAAAACTGCTCTCG
GTGCGGTCAAAGAGTACCGAAAGCGATTCAAGACAGGTGGCATTCTTGTTCCCATTGTGGGCTAGAACTAGGACGCGACC
ACCATGCGGCCATCAACATCAAGTACAGGGCGGTGGGGCATCCCGTTCTTTTCGCGTCAGCGGGACGGAGTCCTTGA

Upstream 100 bases:

>100_bases
AGGCAAGCATATTGGGTACGAAGCCCTGAATATCAAAGGTGTTGCTAGAACCCGACTAGCAAAATCTACCTATGATGCTG
GGTGGGGACAATTTCTGCAA

Downstream 100 bases:

>100_bases
AGCCCGCACTCTCTCGCTTTGGCGGCGCGGAGCGCTTTGCGTCAGCATGAGTGTGGGAGTATGTCACGCTGAAGAAATCT
ACAGGGATCCAGTTGGGGAC

Product: ISSoc11, transposase orfB

Products: NA

Alternate protein names: Transposase Truncation; ISSoc5 Transposase; ISSoc11 Transposase OrfB; ISSoc10 OrfB Transposase

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MLAVKAERAGLRAIAVNPNGSSQNCSRCGQRVPKAIQDRWHSCSHCGLELGRDHHAAINIKYRAVGHPVLFASAGRSP

Sequences:

>Translated_78_residues
MLAVKAERAGLRAIAVNPNGSSQNCSRCGQRVPKAIQDRWHSCSHCGLELGRDHHAAINIKYRAVGHPVLFASAGRSP
>Mature_78_residues
MLAVKAERAGLRAIAVNPNGSSQNCSRCGQRVPKAIQDRWHSCSHCGLELGRDHHAAINIKYRAVGHPVLFASAGRSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8401; Mature: 8401

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVKAERAGLRAIAVNPNGSSQNCSRCGQRVPKAIQDRWHSCSHCGLELGRDHHAAINI
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEE
KYRAVGHPVLFASAGRSP
EEEECCCEEEEECCCCCC
>Mature Secondary Structure
MLAVKAERAGLRAIAVNPNGSSQNCSRCGQRVPKAIQDRWHSCSHCGLELGRDHHAAINI
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEE
KYRAVGHPVLFASAGRSP
EEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA