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The map label for this gene is ydcM [C]

Identifier: 86608569

GI number: 86608569

Start: 1126685

End: 1127458

Strand: Reverse

Name: ydcM [C]

Synonym: CYB_1091

Alternate gene names: 86608569

Gene position: 1127458-1126685 (Counterclockwise)

Preceding gene: 86608572

Following gene: 86608568

Centisome position: 37.01

GC content: 54.26

Gene sequence:

>774_bases
ATGAGAACTGCTTACCAGTACCGTTTGCGACCTACGCCCAGCCAGATTGCTTTGATGAGCGAGTGGCTAGACTTGTTACG
CAAGCAGTACAACTACCGCTTGGCAGAGCGCTTTGCGTGGTGGGAACACAATCGCTGTGATAGCAATGCTTGTCCCCTAG
TCTGTCATTTGCCCCAGCTGAAAGACAAGCCCGATTTCTACTCCCAGAAACGGGACTTGGTGAAGACGAAAGCCCTGTTT
CCGGAGTACAGAGCCATCCATTCGCAAGTCCTGCAAAACTGCATAGAGCGAGTGCACAAAGCATTCGACCGCTGGCTGAA
GGGGGACGGTAACGGCAAGCGGGCATGGAAACCCAGATTCAAGGGAGTTGGGCGGTATCGCTCCTTCAGTTTCCCCCCAA
TGCAACAGGACTGCATTTGCGGGCAGTTTATCCATCTGCCCAAAATCGGTGCTGTTCGGATAATTCAGCACCGTCCTTTG
CCTGAGGGCTTTGTGATTAAGGCGGCTACCATCAGCCGCAAGGCAGACGGGTGGTATGTGACCTTGAGCCTGCAAGATTC
GTCCGTCCCTGAGTTTACTCCTGAGTCTGCAACGCTGGAAAACACTACAGGGATCGACGTGGGACTGGACTCCTTTTTGG
TGACCGACGCGGGGGAGTCTGTTCCAGTTCCCCAGTACTATCGCAAGGCAGAGCTCAGGCTCAAGAGGTTGCAGCGAGCC
TTGTCTCGCGAGAAGAAGGGGTCAAACCGCCTATGGCTAGTGACTAGTGGATAG

Upstream 100 bases:

>100_bases
GACACTTTGGTTTTCAATGGACTGGCCTAAAACCGAGACGGTAACCCCACCGCATGAAGCAATAAGGTAGGATTCATTCC
AGTAGATTACCCTTGCCTCA

Downstream 100 bases:

>100_bases
TGACCAGTAGATAGTGAATAGTGACTATCCACTAACCACTATCCACTAACCACTATCTCAGCGCAAAGATTTTCATGACA
AAACAGCGAACTGGCTGGTA

Product: ISSoc11, transposase orfA

Products: NA

Alternate protein names: DNA-Methyltransferase; Transposase-Like Protein B; Transposase OrfB; ISSoc11 Transposase OrfA Truncation; ISSoc3 OrfB Transposase; LOW QUALITY PROTEIN Transposase; ISSoc11 Transposase OrfA; ISSoc5 Transposase; TNB Transposase B; Gifsy-1 Prophage GlpA; ISAfe8 Transposase; ISCpe2 Transposase OrfB; ISSoc9 Transposase; Transposase OrfB Family; ISSoc12 Transposase; ISSoc10 OrfB Transposase; Transposase OrfB For Insertion Sequence Element; ISSoc5 Transposase Truncation; Transposase OrfB Family Protein

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRTAYQYRLRPTPSQIALMSEWLDLLRKQYNYRLAERFAWWEHNRCDSNACPLVCHLPQLKDKPDFYSQKRDLVKTKALF
PEYRAIHSQVLQNCIERVHKAFDRWLKGDGNGKRAWKPRFKGVGRYRSFSFPPMQQDCICGQFIHLPKIGAVRIIQHRPL
PEGFVIKAATISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRKAELRLKRLQRA
LSREKKGSNRLWLVTSG

Sequences:

>Translated_257_residues
MRTAYQYRLRPTPSQIALMSEWLDLLRKQYNYRLAERFAWWEHNRCDSNACPLVCHLPQLKDKPDFYSQKRDLVKTKALF
PEYRAIHSQVLQNCIERVHKAFDRWLKGDGNGKRAWKPRFKGVGRYRSFSFPPMQQDCICGQFIHLPKIGAVRIIQHRPL
PEGFVIKAATISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRKAELRLKRLQRA
LSREKKGSNRLWLVTSG
>Mature_257_residues
MRTAYQYRLRPTPSQIALMSEWLDLLRKQYNYRLAERFAWWEHNRCDSNACPLVCHLPQLKDKPDFYSQKRDLVKTKALF
PEYRAIHSQVLQNCIERVHKAFDRWLKGDGNGKRAWKPRFKGVGRYRSFSFPPMQQDCICGQFIHLPKIGAVRIIQHRPL
PEGFVIKAATISRKADGWYVTLSLQDSSVPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRKAELRLKRLQRA
LSREKKGSNRLWLVTSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29830; Mature: 29830

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAYQYRLRPTPSQIALMSEWLDLLRKQYNYRLAERFAWWEHNRCDSNACPLVCHLPQL
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEECCCC
KDKPDFYSQKRDLVKTKALFPEYRAIHSQVLQNCIERVHKAFDRWLKGDGNGKRAWKPRF
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
KGVGRYRSFSFPPMQQDCICGQFIHLPKIGAVRIIQHRPLPEGFVIKAATISRKADGWYV
HCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEE
TLSLQDSSVPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRKAELRLKRLQRA
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LSREKKGSNRLWLVTSG
HHHHCCCCCEEEEEECC
>Mature Secondary Structure
MRTAYQYRLRPTPSQIALMSEWLDLLRKQYNYRLAERFAWWEHNRCDSNACPLVCHLPQL
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEECCCC
KDKPDFYSQKRDLVKTKALFPEYRAIHSQVLQNCIERVHKAFDRWLKGDGNGKRAWKPRF
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
KGVGRYRSFSFPPMQQDCICGQFIHLPKIGAVRIIQHRPLPEGFVIKAATISRKADGWYV
HCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEE
TLSLQDSSVPEFTPESATLENTTGIDVGLDSFLVTDAGESVPVPQYYRKAELRLKRLQRA
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LSREKKGSNRLWLVTSG
HHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA