| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pstC-1 [H]
Identifier: 86608554
GI number: 86608554
Start: 1113089
End: 1114057
Strand: Reverse
Name: pstC-1 [H]
Synonym: CYB_1076
Alternate gene names: 86608554
Gene position: 1114057-1113089 (Counterclockwise)
Preceding gene: 86608555
Following gene: 86608553
Centisome position: 36.57
GC content: 55.01
Gene sequence:
>969_bases ATGAATACCTTTTTTTCTGACAGCAGTTCTATGTTTCGGCCTCGGCCGGTTTTCCAGCGCCGGCGCGACCAGGTTTTTAT CTGGGCTACGCGGATTGCCGTGTTTTTCTCGGCCTTCCTGCTGCTCTGGATTGCTCTGGAGATCGGCATTCAGTCTTTAC CTGCTATAGACAGGTTTGGACTAAGCTTTTTCTGGAACACCACCTGGGATCCGGTCGAGGATATCTATGGGGCCTGGCCA CAGATCTACGGCACGCTAGTGACTTCTCTCATCGCTCTGATTGTGGGGGTTCCTTTTAGCTTTGGCATCTCTATTTTTCT GAGCGAGGATTTTCTTCCGAAGTCCTTGCGTCTGGCTCTGATCATTGTGGTTGAGCTGTTGGCGGCTATTCCCAGTGTGG TGTTCGGCATTTGGGGATTGTTTGTCTTCATCCCCTTCTTCCGCCCCGTTCAGATGTTCCTGTACGAGAACTTCAATTGG CTTCCCATTTTCGGCACACCACCGATTGGGCCGGGGATGCTGACGGCAGGGGTTGTCTTGGGGATCATGATCATCCCCAT CATCACGGCCATCGCCAGAGAGGTTTTGGTGGCTGTTCCTCCTGAGCTGCGCGCGGCTGCCTATGCGATGGGGGCTACGC GATGGGAAGCCATTTTTGGAGTGGTACTACCGGCTGCGATTGGGGGTATGTTGGGGGCTGTGGTGCTGGGTTTGGGACGC GCCCTGGGCGAGACCATGGCGGTGGCAATGCTGATTGGCAATGCGCGGGGGATTAGAGTCTCGCTTTTGGCCCCTGCCAG CAACATCCCTGCATTGCTGGCCAGCGAGTTTGCAGAAGCAGCCGACGAGCAGATCTCGGCTCTGATGTATGCGGCTTTGA TCTTGCTGGTCATTACGCTGGTGGTCAACATCATCGCTGAGCTATTGGTTCGGCGCGTCAAGTTTGCTTTGACAGCTTCT CGGGAGTAG
Upstream 100 bases:
>100_bases ATATGTCCCTCTGCCGGAAGAAACGCGGCAAAAAGCTCTGGCTGCGCTGGAAGGCATTACCCCGTAAAAACTCTTACCAA CCACTTCTGGCTTCAGGCGG
Downstream 100 bases:
>100_bases AGGAACATGGCGACACAAGTGGCAGCACAGGCCAATTTGTTCAAACGCAAAGTCAGATCCAAGCGCGTCGTGCTGGACTG GGTGATGACAGGCCTGATCT
Product: phosphate ABC transporter, permease protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNTFFSDSSSMFRPRPVFQRRRDQVFIWATRIAVFFSAFLLLWIALEIGIQSLPAIDRFGLSFFWNTTWDPVEDIYGAWP QIYGTLVTSLIALIVGVPFSFGISIFLSEDFLPKSLRLALIIVVELLAAIPSVVFGIWGLFVFIPFFRPVQMFLYENFNW LPIFGTPPIGPGMLTAGVVLGIMIIPIITAIAREVLVAVPPELRAAAYAMGATRWEAIFGVVLPAAIGGMLGAVVLGLGR ALGETMAVAMLIGNARGIRVSLLAPASNIPALLASEFAEAADEQISALMYAALILLVITLVVNIIAELLVRRVKFALTAS RE
Sequences:
>Translated_322_residues MNTFFSDSSSMFRPRPVFQRRRDQVFIWATRIAVFFSAFLLLWIALEIGIQSLPAIDRFGLSFFWNTTWDPVEDIYGAWP QIYGTLVTSLIALIVGVPFSFGISIFLSEDFLPKSLRLALIIVVELLAAIPSVVFGIWGLFVFIPFFRPVQMFLYENFNW LPIFGTPPIGPGMLTAGVVLGIMIIPIITAIAREVLVAVPPELRAAAYAMGATRWEAIFGVVLPAAIGGMLGAVVLGLGR ALGETMAVAMLIGNARGIRVSLLAPASNIPALLASEFAEAADEQISALMYAALILLVITLVVNIIAELLVRRVKFALTAS RE >Mature_322_residues MNTFFSDSSSMFRPRPVFQRRRDQVFIWATRIAVFFSAFLLLWIALEIGIQSLPAIDRFGLSFFWNTTWDPVEDIYGAWP QIYGTLVTSLIALIVGVPFSFGISIFLSEDFLPKSLRLALIIVVELLAAIPSVVFGIWGLFVFIPFFRPVQMFLYENFNW LPIFGTPPIGPGMLTAGVVLGIMIIPIITAIAREVLVAVPPELRAAAYAMGATRWEAIFGVVLPAAIGGMLGAVVLGLGR ALGETMAVAMLIGNARGIRVSLLAPASNIPALLASEFAEAADEQISALMYAALILLVITLVVNIIAELLVRRVKFALTAS RE
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=317, Percent_Identity=43.5331230283912, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1790163, Length=305, Percent_Identity=23.9344262295082, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35165; Mature: 35165
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFFSDSSSMFRPRPVFQRRRDQVFIWATRIAVFFSAFLLLWIALEIGIQSLPAIDRFG CCCCCCCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC LSFFWNTTWDPVEDIYGAWPQIYGTLVTSLIALIVGVPFSFGISIFLSEDFLPKSLRLAL HHHEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCHHHHHHH IIVVELLAAIPSVVFGIWGLFVFIPFFRPVQMFLYENFNWLPIFGTPPIGPGMLTAGVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH GIMIIPIITAIAREVLVAVPPELRAAAYAMGATRWEAIFGVVLPAAIGGMLGAVVLGLGR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGETMAVAMLIGNARGIRVSLLAPASNIPALLASEFAEAADEQISALMYAALILLVITL HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVNIIAELLVRRVKFALTASRE HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTFFSDSSSMFRPRPVFQRRRDQVFIWATRIAVFFSAFLLLWIALEIGIQSLPAIDRFG CCCCCCCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC LSFFWNTTWDPVEDIYGAWPQIYGTLVTSLIALIVGVPFSFGISIFLSEDFLPKSLRLAL HHHEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCHHHHHHH IIVVELLAAIPSVVFGIWGLFVFIPFFRPVQMFLYENFNWLPIFGTPPIGPGMLTAGVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH GIMIIPIITAIAREVLVAVPPELRAAAYAMGATRWEAIFGVVLPAAIGGMLGAVVLGLGR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGETMAVAMLIGNARGIRVSLLAPASNIPALLASEFAEAADEQISALMYAALILLVITL HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVNIIAELLVRRVKFALTASRE HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]