| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pstA-1 [H]
Identifier: 86608553
GI number: 86608553
Start: 1112192
End: 1113082
Strand: Reverse
Name: pstA-1 [H]
Synonym: CYB_1075
Alternate gene names: 86608553
Gene position: 1113082-1112192 (Counterclockwise)
Preceding gene: 86608554
Following gene: 86608552
Centisome position: 36.53
GC content: 53.09
Gene sequence:
>891_bases ATGGCGACACAAGTGGCAGCACAGGCCAATTTGTTCAAACGCAAAGTCAGATCCAAGCGCGTCGTGCTGGACTGGGTGAT GACAGGCCTGATCTTTGCTTCCAGCATTTTTGCGATTGTTGTGCTCGCTTCCATCCTTTACTATGTTTTCGTCAATGGCA TTGAGCGCTTCAATTGGCAGACCTTAACCCAGCTTCCTCCTCCTCCTGGCGATCAGGTAGGCGGCTTTGGCAACGCTGTG CTGGGAACGATCATTGTGGTATCGATTGCCATTACAATCACTTTCCCTATTGGTCTATTTGCTGCGATCTATCTCTCGGA GTTCGGCCAGAACAGTTCTACAGCATCATCTCTGCGTTTCATTATCAAAGTGCTGACGGGGGTTCCTTCCATCATCGCTG GCGTGTTCGCCTATGGGGTGCTGGTGCTTTCCACCAAGACCTTTTCTGCCCTTTCTGGCGGAGTAGCTCTATCGGTATTG ACTTTGCCGATCATCATCCTCTCCTGCGAGGAGGCTCTGCGCTTGGTGCCGGCGGACACTCGGGCTGCCGCCTACGCCTT GGGAGCTTCGCGGGTGCAGACTGTGTTTCGGGTCGTTTTGCCAGCTGCTTTGCCGGTCGTTCTGACGGGAGTGACCTTGG CCATTGCCCGAGCAGCTGGGGAGACTGCACCTCTAATTTTTACTGCTCTGTTCAGCTTTCTATGGCCTGATGGTCTGCTG AAGCCAGTAGCCTCGTTGGCGGTGCTGATCTACAACTTTGCCATTGTTCCCTTCGAGAACCAGCAGAAAATTGCTTGGGG AGGAGCCTTGGCTTTGGTGATTCTGGTTTTGATCACCACGATCAGTTTCCGGCTGCTGCTGAGTCGTCGTCAGGAAACCA TTACTATCTGA
Upstream 100 bases:
>100_bases TTTGATCTTGCTGGTCATTACGCTGGTGGTCAACATCATCGCTGAGCTATTGGTTCGGCGCGTCAAGTTTGCTTTGACAG CTTCTCGGGAGTAGAGGAAC
Downstream 100 bases:
>100_bases TCTGGTTCTTCTGAGATTTTTGCCTCACTATTCTTCGATTTTGAGTTTGGGTTCTGAAGCAACGTCTACCTCTGGTATTC CTATGCGCCCTCCATTTCCC
Product: phosphate ABC transporter, permease protein PtsA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MATQVAAQANLFKRKVRSKRVVLDWVMTGLIFASSIFAIVVLASILYYVFVNGIERFNWQTLTQLPPPPGDQVGGFGNAV LGTIIVVSIAITITFPIGLFAAIYLSEFGQNSSTASSLRFIIKVLTGVPSIIAGVFAYGVLVLSTKTFSALSGGVALSVL TLPIIILSCEEALRLVPADTRAAAYALGASRVQTVFRVVLPAALPVVLTGVTLAIARAAGETAPLIFTALFSFLWPDGLL KPVASLAVLIYNFAIVPFENQQKIAWGGALALVILVLITTISFRLLLSRRQETITI
Sequences:
>Translated_296_residues MATQVAAQANLFKRKVRSKRVVLDWVMTGLIFASSIFAIVVLASILYYVFVNGIERFNWQTLTQLPPPPGDQVGGFGNAV LGTIIVVSIAITITFPIGLFAAIYLSEFGQNSSTASSLRFIIKVLTGVPSIIAGVFAYGVLVLSTKTFSALSGGVALSVL TLPIIILSCEEALRLVPADTRAAAYALGASRVQTVFRVVLPAALPVVLTGVTLAIARAAGETAPLIFTALFSFLWPDGLL KPVASLAVLIYNFAIVPFENQQKIAWGGALALVILVLITTISFRLLLSRRQETITI >Mature_295_residues ATQVAAQANLFKRKVRSKRVVLDWVMTGLIFASSIFAIVVLASILYYVFVNGIERFNWQTLTQLPPPPGDQVGGFGNAVL GTIIVVSIAITITFPIGLFAAIYLSEFGQNSSTASSLRFIIKVLTGVPSIIAGVFAYGVLVLSTKTFSALSGGVALSVLT LPIIILSCEEALRLVPADTRAAAYALGASRVQTVFRVVLPAALPVVLTGVTLAIARAAGETAPLIFTALFSFLWPDGLLK PVASLAVLIYNFAIVPFENQQKIAWGGALALVILVLITTISFRLLLSRRQETITI
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=280, Percent_Identity=36.4285714285714, Blast_Score=195, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31539; Mature: 31408
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQVAAQANLFKRKVRSKRVVLDWVMTGLIFASSIFAIVVLASILYYVFVNGIERFNWQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TLTQLPPPPGDQVGGFGNAVLGTIIVVSIAITITFPIGLFAAIYLSEFGQNSSTASSLRF HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IIKVLTGVPSIIAGVFAYGVLVLSTKTFSALSGGVALSVLTLPIIILSCEEALRLVPADT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCH RAAAYALGASRVQTVFRVVLPAALPVVLTGVTLAIARAAGETAPLIFTALFSFLWPDGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH KPVASLAVLIYNFAIVPFENQQKIAWGGALALVILVLITTISFRLLLSRRQETITI HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATQVAAQANLFKRKVRSKRVVLDWVMTGLIFASSIFAIVVLASILYYVFVNGIERFNWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TLTQLPPPPGDQVGGFGNAVLGTIIVVSIAITITFPIGLFAAIYLSEFGQNSSTASSLRF HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IIKVLTGVPSIIAGVFAYGVLVLSTKTFSALSGGVALSVLTLPIIILSCEEALRLVPADT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCH RAAAYALGASRVQTVFRVVLPAALPVVLTGVTLAIARAAGETAPLIFTALFSFLWPDGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH KPVASLAVLIYNFAIVPFENQQKIAWGGALALVILVLITTISFRLLLSRRQETITI HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2993631; 3881386; 7686882; 9278503; 1447208 [H]