| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608518
Identifier: 86608518
GI number: 86608518
Start: 1080664
End: 1081458
Strand: Direct
Name: 86608518
Synonym: CYB_1039
Alternate gene names: NA
Gene position: 1080664-1081458 (Clockwise)
Preceding gene: 86608514
Following gene: 86608519
Centisome position: 35.47
GC content: 61.76
Gene sequence:
>795_bases ATGTCCTCCAATCCCCTGGTGTTTTTGGTCTGTCACGGCAGCCGGGATCCCGATTATCAGCAGGCTTTGGCAGATTTGTT GGCCCGGGTGCAGCAGCAGCTGGCTCCCCAGCCGGTGGAGCTGGCCCAGTTGGAAGGTCAGCCTCTCACCCTGGCCGAAC AGATTCAAGGACGGCTGGCAGCTTGGCTGGGCGCAGGCCGATCTCCCGATCAAGTGGTGCTGCTGTCGCTGTTTATGGGC GAGGGATCCCATGTGGAAGAGGATTTACCGGCTGCGGTGAAGCAGGTTCAAGCTCGCTGGCCGCGCCTGCCCATCCGGTT AACACCCCCCATTGGCCAGCACCCGGCCCTCCTGGATCTGTTGGTGGCTCGCATTCTGGCTCCACAGCCCTCTTGCTCTG CAACGCTCAGGCAATCCGGCGAACGGGCAGATGCCTGGATTGTGCTTGGCCATGGCAGCCGTCTGCCGGGGTTTGCCGCC CAGCTCCAAGCCGGGATCCAAACTGTGCAACGGCGCTTGCCCGAGATCCCCTTGCATGTGGCTTTTGCTGCCCAGTCCCC CACCTTAGAAGCGGTCGTGATCCATTGCTTGCGCCTTAGCCAGTGCCGTCTACGGGTGCTGCCGTTTTTTCTCTTTCCAG GCGGTCTGCTGCGCGCCCTACAAGAACAGGCTCAGCGATTACAGCGGGAATGGCCTCTGCTCCAAATCCAGGTGGAGCCG CCCCTCTGGCGGGATCCTCAACTGATGCAGGCCATTGTGGAGACACTCCAGGCTTTTAGCCCGGCGCTGGAATAG
Upstream 100 bases:
>100_bases GTACTCTTCAAATCATACGCGCAGATCCTACGCGAGAAGTTGGCGGGATCCCCTAAAGTAGCAAAATGGAACCCTTCCGC TCGGATCCCTGACCTCTGCC
Downstream 100 bases:
>100_bases CCGAATCTTTCCCGTTCCCTCAAAATGGATATTTCCAACAGCAATGACGCGACCAGGACTTGAGATGGGCAAAGTGTATT TGGTGGGGGCAGGGCCTGGG
Product: cbiX protein
Products: NA
Alternate protein names: CbiX Family Protein; Cobalamin Biosynthesis CbiX Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSSNPLVFLVCHGSRDPDYQQALADLLARVQQQLAPQPVELAQLEGQPLTLAEQIQGRLAAWLGAGRSPDQVVLLSLFMG EGSHVEEDLPAAVKQVQARWPRLPIRLTPPIGQHPALLDLLVARILAPQPSCSATLRQSGERADAWIVLGHGSRLPGFAA QLQAGIQTVQRRLPEIPLHVAFAAQSPTLEAVVIHCLRLSQCRLRVLPFFLFPGGLLRALQEQAQRLQREWPLLQIQVEP PLWRDPQLMQAIVETLQAFSPALE
Sequences:
>Translated_264_residues MSSNPLVFLVCHGSRDPDYQQALADLLARVQQQLAPQPVELAQLEGQPLTLAEQIQGRLAAWLGAGRSPDQVVLLSLFMG EGSHVEEDLPAAVKQVQARWPRLPIRLTPPIGQHPALLDLLVARILAPQPSCSATLRQSGERADAWIVLGHGSRLPGFAA QLQAGIQTVQRRLPEIPLHVAFAAQSPTLEAVVIHCLRLSQCRLRVLPFFLFPGGLLRALQEQAQRLQREWPLLQIQVEP PLWRDPQLMQAIVETLQAFSPALE >Mature_263_residues SSNPLVFLVCHGSRDPDYQQALADLLARVQQQLAPQPVELAQLEGQPLTLAEQIQGRLAAWLGAGRSPDQVVLLSLFMGE GSHVEEDLPAAVKQVQARWPRLPIRLTPPIGQHPALLDLLVARILAPQPSCSATLRQSGERADAWIVLGHGSRLPGFAAQ LQAGIQTVQRRLPEIPLHVAFAAQSPTLEAVVIHCLRLSQCRLRVLPFFLFPGGLLRALQEQAQRLQREWPLLQIQVEPP LWRDPQLMQAIVETLQAFSPALE
Specific function: Unknown
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29148; Mature: 29017
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNPLVFLVCHGSRDPDYQQALADLLARVQQQLAPQPVELAQLEGQPLTLAEQIQGRLA CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHH AWLGAGRSPDQVVLLSLFMGEGSHVEEDLPAAVKQVQARWPRLPIRLTPPIGQHPALLDL HHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH LVARILAPQPSCSATLRQSGERADAWIVLGHGSRLPGFAAQLQAGIQTVQRRLPEIPLHV HHHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEE AFAAQSPTLEAVVIHCLRLSQCRLRVLPFFLFPGGLLRALQEQAQRLQREWPLLQIQVEP EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECC PLWRDPQLMQAIVETLQAFSPALE CCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSNPLVFLVCHGSRDPDYQQALADLLARVQQQLAPQPVELAQLEGQPLTLAEQIQGRLA CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHH AWLGAGRSPDQVVLLSLFMGEGSHVEEDLPAAVKQVQARWPRLPIRLTPPIGQHPALLDL HHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH LVARILAPQPSCSATLRQSGERADAWIVLGHGSRLPGFAAQLQAGIQTVQRRLPEIPLHV HHHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEE AFAAQSPTLEAVVIHCLRLSQCRLRVLPFFLFPGGLLRALQEQAQRLQREWPLLQIQVEP EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECC PLWRDPQLMQAIVETLQAFSPALE CCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA