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The map label for this gene is yvhJ [H]

Identifier: 86608480

GI number: 86608480

Start: 1040370

End: 1041839

Strand: Direct

Name: yvhJ [H]

Synonym: CYB_1001

Alternate gene names: 86608480

Gene position: 1040370-1041839 (Clockwise)

Preceding gene: 86608475

Following gene: 86608481

Centisome position: 34.15

GC content: 61.63

Gene sequence:

>1470_bases
ATGGCCTTGAATTGGTGGAGTTGGCAACACCACCCAGACAGTACACCCTTTCCTGTACGCGCTCGCGAGGCCTGGTCTGA
CCTGATGCCCTCCTTCCACTATCCCCCCCGTCCTGACCGTGTCCGCGCAGCTCGTCAGCAGGCCATTCGTCAGGGGATCC
TCTGGCTGTTGTTGGGGTTCACGGCTGTGTTGGCGGGTTCTGCCGGTGCCCTCTTGGCCGTGATGTTGCCCCGTCAGGTG
ATCCCAACTTCCCTCACTCCTGCAGAACAAGAAGCCTTCCGTCCCGATGCCTTACGGGCTGCGGCTCTGGATCGCTCGTT
GCATATCCTCATTCTCGGCACGGACAACCCGGATCCCACCCTGCCCTTGCCCACAGAGCGAGATCGCTTCCACACCCGCA
GCGACACCATTCTCTTGGCCCGCTTTGATCCCCAGGCGCGGCGGATTACCGTTTTGTCCATCCCCCGCGATACTCGTGTG
CGCTTGCCTGGCTTTGGTGTGGCCAAGATCAATGCTGCCAACTTGGCAGGGGGCCCGGCGCTGACGGCCCAGGTGGTCAG
CCACTTGATGGGTGGGATCCCGATTGACCGCTACATTCGCCTCAATACCGACGCTCTGGAAAAGCTGATCGATGCGGTGG
GCGGCGTGGAAATCTACGTGCCGGAACCGATGCAGTACGCAGATCACACCCAGCAGTTGTTCATCCACCTGGAGCCCGGC
TGGCAACGCCTCAATGGAGAACAAGCCCACCACTTTGCCCGCTTTCGCCGCGATCACCTGGGATTGGGGGATATCGGTCG
GGTGCAACGGCAACAGGAATTGCTGCGGGCCCTGAGCCGGGAACTGCTCTCCCCTGCTGTCTGGCCGCGGATCCCAAAGA
TTTTGCAGGTTATCCGCACCAACCTCGATACCAACCTCACCTGGGAAGAGGTTCTGAGCTTGGCCAAGTTTGTCCTCACC
TCTGGGGGCGATCGCATCGACCTGGTGCTGCTGCCGGGCCGCTTCAGTCAGCCGGGAGAATTCTCCACCAGCTACTGGCT
GCCGGATCCAGCCGGGATCCGACGGGTGGCCGTCTCCCACTTTGGCCTGGAGGCAGAGGTAGCCCGCATTCCTCCACACC
GCCTGCGCATAGCCGTGCAAAACGCAACCGGAGAGCCGGGGATGGCCCGCCGTATGGTGCAAGAATTGGTGAGGCAAGGA
TACGCCCATGCTTTTGCCGTGGAAGACAGCACTCAGGTGCTGCAGCAAACGGAGATCCTCGCCCAGAGCGGGGATCGGGA
GGGGGCTAAACAGATCCGCGCCGCCATTGGCCTGGGAGAAGTGCGGGTAGAATCTACTGGCGTTCTCAACTCCGATGTCA
CCATTCGAGTCGGCCAAGATTGGGCTCAACAGTTGGCTTTGGATGAAGCACTCCGCGCCGCTGACGCCAACGGCCAAACC
CAAGCTCCGCCCGGAGCAGCTCAGCTCTAG

Upstream 100 bases:

>100_bases
CTCTGACTTTCCCGACAACGGCTGCAGGGATCCCCCTGTGGCGACTGCTACCTCGCTGAAGTTGGATCCAGACAACTCTG
AAAACTGAGGATAGGGTAAC

Downstream 100 bases:

>100_bases
AGAGCCGGTTCGGTTGCGAGTGCGGATTTCCGAAAAAGAGCCTGCTTGTCGGGGACTTTTCGGTCTCTGTAGATTAGCAC
TGAGCTTGTTTGAGTGCTGA

Product: cell envelope-related function transcriptional attenuator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MALNWWSWQHHPDSTPFPVRAREAWSDLMPSFHYPPRPDRVRAARQQAIRQGILWLLLGFTAVLAGSAGALLAVMLPRQV
IPTSLTPAEQEAFRPDALRAAALDRSLHILILGTDNPDPTLPLPTERDRFHTRSDTILLARFDPQARRITVLSIPRDTRV
RLPGFGVAKINAANLAGGPALTAQVVSHLMGGIPIDRYIRLNTDALEKLIDAVGGVEIYVPEPMQYADHTQQLFIHLEPG
WQRLNGEQAHHFARFRRDHLGLGDIGRVQRQQELLRALSRELLSPAVWPRIPKILQVIRTNLDTNLTWEEVLSLAKFVLT
SGGDRIDLVLLPGRFSQPGEFSTSYWLPDPAGIRRVAVSHFGLEAEVARIPPHRLRIAVQNATGEPGMARRMVQELVRQG
YAHAFAVEDSTQVLQQTEILAQSGDREGAKQIRAAIGLGEVRVESTGVLNSDVTIRVGQDWAQQLALDEALRAADANGQT
QAPPGAAQL

Sequences:

>Translated_489_residues
MALNWWSWQHHPDSTPFPVRAREAWSDLMPSFHYPPRPDRVRAARQQAIRQGILWLLLGFTAVLAGSAGALLAVMLPRQV
IPTSLTPAEQEAFRPDALRAAALDRSLHILILGTDNPDPTLPLPTERDRFHTRSDTILLARFDPQARRITVLSIPRDTRV
RLPGFGVAKINAANLAGGPALTAQVVSHLMGGIPIDRYIRLNTDALEKLIDAVGGVEIYVPEPMQYADHTQQLFIHLEPG
WQRLNGEQAHHFARFRRDHLGLGDIGRVQRQQELLRALSRELLSPAVWPRIPKILQVIRTNLDTNLTWEEVLSLAKFVLT
SGGDRIDLVLLPGRFSQPGEFSTSYWLPDPAGIRRVAVSHFGLEAEVARIPPHRLRIAVQNATGEPGMARRMVQELVRQG
YAHAFAVEDSTQVLQQTEILAQSGDREGAKQIRAAIGLGEVRVESTGVLNSDVTIRVGQDWAQQLALDEALRAADANGQT
QAPPGAAQL
>Mature_488_residues
ALNWWSWQHHPDSTPFPVRAREAWSDLMPSFHYPPRPDRVRAARQQAIRQGILWLLLGFTAVLAGSAGALLAVMLPRQVI
PTSLTPAEQEAFRPDALRAAALDRSLHILILGTDNPDPTLPLPTERDRFHTRSDTILLARFDPQARRITVLSIPRDTRVR
LPGFGVAKINAANLAGGPALTAQVVSHLMGGIPIDRYIRLNTDALEKLIDAVGGVEIYVPEPMQYADHTQQLFIHLEPGW
QRLNGEQAHHFARFRRDHLGLGDIGRVQRQQELLRALSRELLSPAVWPRIPKILQVIRTNLDTNLTWEEVLSLAKFVLTS
GGDRIDLVLLPGRFSQPGEFSTSYWLPDPAGIRRVAVSHFGLEAEVARIPPHRLRIAVQNATGEPGMARRMVQELVRQGY
AHAFAVEDSTQVLQQTEILAQSGDREGAKQIRAAIGLGEVRVESTGVLNSDVTIRVGQDWAQQLALDEALRAADANGQTQ
APPGAAQL

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 54173; Mature: 54042

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNWWSWQHHPDSTPFPVRAREAWSDLMPSFHYPPRPDRVRAARQQAIRQGILWLLLGF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TAVLAGSAGALLAVMLPRQVIPTSLTPAEQEAFRPDALRAAALDRSLHILILGTDNPDPT
HHHHHCCCHHHHHHHHCHHHCCCCCCCCHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCC
LPLPTERDRFHTRSDTILLARFDPQARRITVLSIPRDTRVRLPGFGVAKINAANLAGGPA
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCEEEEECCCCCCCHH
LTAQVVSHLMGGIPIDRYIRLNTDALEKLIDAVGGVEIYVPEPMQYADHTQQLFIHLEPG
HHHHHHHHHHCCCCHHHEEEECHHHHHHHHHHHCCEEEEECCCHHHHCCCEEEEEEECCC
WQRLNGEQAHHFARFRRDHLGLGDIGRVQRQQELLRALSRELLSPAVWPRIPKILQVIRT
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NLDTNLTWEEVLSLAKFVLTSGGDRIDLVLLPGRFSQPGEFSTSYWLPDPAGIRRVAVSH
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FGLEAEVARIPPHRLRIAVQNATGEPGMARRMVQELVRQGYAHAFAVEDSTQVLQQTEIL
CCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
AQSGDREGAKQIRAAIGLGEVRVESTGVLNSDVTIRVGQDWAQQLALDEALRAADANGQT
HHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCC
QAPPGAAQL
CCCCCCCCC
>Mature Secondary Structure 
ALNWWSWQHHPDSTPFPVRAREAWSDLMPSFHYPPRPDRVRAARQQAIRQGILWLLLGF
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TAVLAGSAGALLAVMLPRQVIPTSLTPAEQEAFRPDALRAAALDRSLHILILGTDNPDPT
HHHHHCCCHHHHHHHHCHHHCCCCCCCCHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCC
LPLPTERDRFHTRSDTILLARFDPQARRITVLSIPRDTRVRLPGFGVAKINAANLAGGPA
CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCEEEEECCCCCCCHH
LTAQVVSHLMGGIPIDRYIRLNTDALEKLIDAVGGVEIYVPEPMQYADHTQQLFIHLEPG
HHHHHHHHHHCCCCHHHEEEECHHHHHHHHHHHCCEEEEECCCHHHHCCCEEEEEEECCC
WQRLNGEQAHHFARFRRDHLGLGDIGRVQRQQELLRALSRELLSPAVWPRIPKILQVIRT
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NLDTNLTWEEVLSLAKFVLTSGGDRIDLVLLPGRFSQPGEFSTSYWLPDPAGIRRVAVSH
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FGLEAEVARIPPHRLRIAVQNATGEPGMARRMVQELVRQGYAHAFAVEDSTQVLQQTEIL
CCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
AQSGDREGAKQIRAAIGLGEVRVESTGVLNSDVTIRVGQDWAQQLALDEALRAADANGQT
HHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCC
QAPPGAAQL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]