| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is htpG [H]
Identifier: 86608481
GI number: 86608481
Start: 1041947
End: 1043806
Strand: Direct
Name: htpG [H]
Synonym: CYB_1003
Alternate gene names: 86608481
Gene position: 1041947-1043806 (Clockwise)
Preceding gene: 86608480
Following gene: 86608483
Centisome position: 34.2
GC content: 52.63
Gene sequence:
>1860_bases ATGACCGTGCTGGAACAGGGATCCATCACCATCCACACCGAGAACATCTTTCCCATCATCAAGCAGTCTCTCTACTCGGA TCGAGAGATCTTCTTGCGGGAGCTGATCTCCAATGCTGCTGATGCCATCACCAAGCTGAAGATGGCCAGCCTTGCCGGCG AAGTGGCAGATCTCCCAGAGCCGGAGATTACGATTGCCCTCAACAAGGAGGCCAAGACCTTAGCGGTGGCCGATAACGGC ATTGGCATGACTGCCGAGGAAGTGAAAAAATACATCAACCAGGTGGCTTTTTCCAGCGCTGAAGAGTTCATTCAAAAGTA CAAGGGCAAAGACGCAGAGCAAGCAATCATTGGCCACTTTGGTCTAGGATTCTACTCCTCTTTTATGGTGTCGCAGCGGG TGGAGATCGACACCCTCTCCTATCGGCCCGGCAGCACGCCGGTGAAGTGGGCTTGTGACGGCACCACTACTTTTACCCTC TCCGATTCTGAGCGCTCCAGCATCGGCACCACCGTTACCCTTTACATCACCCCCGAAAACGAAGAATACCTGGAGCCAAG CCGCATTCGGGAATTGGTTCGTAAATACTGCGATTTCATCCCCGTTCCCATCAAGTTAAACGGGGAAGTGATCAACAAGC AAAAGCCCCTGTGGAGAACCTCACCTTCCGAACTCAAAGATGAGGATTACCTAGAGTTTTATCGCTACCTCTATCCCTTC CAAGAGGATCCCCATTTCTGGGTGCACATCAACACCGACTATCCCTTCATCGTGCAAGGGATCCTCTATTTCCCCAAATT GCGCCCCGATATTGATCCCACCAAGGGTCAAGTCAAGCTGTTCTGCAATCAAGTCTTTGTCCAAGATAACTGTGAGGAAG TCATCCCCAAGTTTCTCCTGCCTCTGCGGGGGGCCATCGACAGCCCGGATATTCCTCTCAACGTCTCCCGCAGCTTCTTA CAAAATGACCGCACCGTAAGACGCATTGGGGATCACGTTGCCAAAAAGGTGGCGGATCGTCTCAATGAACTGTACAGGGA AGATTACGAAAAATACGTCAAGGTCTGGCCCGACATCAGCCTCTTTATGAAGTTTGGGGCGATGAACAACGACAAGTTCT TTGCCCAGATTAAGGATATTCTCATTTTCCGAGTGGCCGGATCCCCTGCTGACAAACCCGAATATGTGACCCTGAAAGCG TACCTGGAGCGCACCCGCGACAAGCAAAACAAGCGAGTTTACTACGCCACCGATGAGGCTGCCCAGAGTGCCTACATCGA TCTCCACCGCTCTCAAGGACTGGAAGTGATCATGCTGGATAGCTGGATCGACAGCCACTTCAGCAGCTTTTTGGAGCGGG AATACAAAGAAGAAGGGATCCAATTTAAGCGGGTGGACTCTGAGCTGGATGAAACGCTGGTGGATAAAGACAAAGCCGCC GAAATTGTTGACCCGGTCACGCAAAAAACCCGCAGCCAAAAGTTGGTCGATCTCTTCCGACAAGCCCTGGGCAAAGACAA GTTGCAGATCCAAGCAGAAGCTCTTAAATCAGAGTCGGTTCCGGCCATGATCTTGCTGCCGGAGACGCTGCGGCGCCTAC AGGAGCTCAACGCCGTCATCCAGCAGAAGCCGCTGGAGTTTCTGGAAGAGCACACGCTGGTTCTGAACACGGCCCATCCC CTTATCCAAAACCTGCAGTCTCTTGCCGATCAGGGTCGGGATCCCGACTTGGTTCACCTCATCTGCAATCACATCTACGA TTTGGCTTTGATTACCCAGAAAAGCTTTGACCCGGCAGCCGTGCGGGCCTTTGTGCAGCGTTCCAACGAAGTGCTGACTC GCCTCACCCGCCCTCAATAG
Upstream 100 bases:
>100_bases GTTCGGTTGCGAGTGCGGATTTCCGAAAAAGAGCCTGCTTGTCGGGGACTTTTCGGTCTCTGTAGATTAGCACTGAGCTT GTTTGAGTGCTGAGCCACCT
Downstream 100 bases:
>100_bases GCAGCGCTGTCCAGGGTAGACTGCAGGGCTTCCGCTCCACCGGGCAGAGACGGACGGGATCCGGCCCCGTTGCCGCTGTG GCCGTAGCTGCCTTGGAGCA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MTVLEQGSITIHTENIFPIIKQSLYSDREIFLRELISNAADAITKLKMASLAGEVADLPEPEITIALNKEAKTLAVADNG IGMTAEEVKKYINQVAFSSAEEFIQKYKGKDAEQAIIGHFGLGFYSSFMVSQRVEIDTLSYRPGSTPVKWACDGTTTFTL SDSERSSIGTTVTLYITPENEEYLEPSRIRELVRKYCDFIPVPIKLNGEVINKQKPLWRTSPSELKDEDYLEFYRYLYPF QEDPHFWVHINTDYPFIVQGILYFPKLRPDIDPTKGQVKLFCNQVFVQDNCEEVIPKFLLPLRGAIDSPDIPLNVSRSFL QNDRTVRRIGDHVAKKVADRLNELYREDYEKYVKVWPDISLFMKFGAMNNDKFFAQIKDILIFRVAGSPADKPEYVTLKA YLERTRDKQNKRVYYATDEAAQSAYIDLHRSQGLEVIMLDSWIDSHFSSFLEREYKEEGIQFKRVDSELDETLVDKDKAA EIVDPVTQKTRSQKLVDLFRQALGKDKLQIQAEALKSESVPAMILLPETLRRLQELNAVIQQKPLEFLEEHTLVLNTAHP LIQNLQSLADQGRDPDLVHLICNHIYDLALITQKSFDPAAVRAFVQRSNEVLTRLTRPQ
Sequences:
>Translated_619_residues MTVLEQGSITIHTENIFPIIKQSLYSDREIFLRELISNAADAITKLKMASLAGEVADLPEPEITIALNKEAKTLAVADNG IGMTAEEVKKYINQVAFSSAEEFIQKYKGKDAEQAIIGHFGLGFYSSFMVSQRVEIDTLSYRPGSTPVKWACDGTTTFTL SDSERSSIGTTVTLYITPENEEYLEPSRIRELVRKYCDFIPVPIKLNGEVINKQKPLWRTSPSELKDEDYLEFYRYLYPF QEDPHFWVHINTDYPFIVQGILYFPKLRPDIDPTKGQVKLFCNQVFVQDNCEEVIPKFLLPLRGAIDSPDIPLNVSRSFL QNDRTVRRIGDHVAKKVADRLNELYREDYEKYVKVWPDISLFMKFGAMNNDKFFAQIKDILIFRVAGSPADKPEYVTLKA YLERTRDKQNKRVYYATDEAAQSAYIDLHRSQGLEVIMLDSWIDSHFSSFLEREYKEEGIQFKRVDSELDETLVDKDKAA EIVDPVTQKTRSQKLVDLFRQALGKDKLQIQAEALKSESVPAMILLPETLRRLQELNAVIQQKPLEFLEEHTLVLNTAHP LIQNLQSLADQGRDPDLVHLICNHIYDLALITQKSFDPAAVRAFVQRSNEVLTRLTRPQ >Mature_618_residues TVLEQGSITIHTENIFPIIKQSLYSDREIFLRELISNAADAITKLKMASLAGEVADLPEPEITIALNKEAKTLAVADNGI GMTAEEVKKYINQVAFSSAEEFIQKYKGKDAEQAIIGHFGLGFYSSFMVSQRVEIDTLSYRPGSTPVKWACDGTTTFTLS DSERSSIGTTVTLYITPENEEYLEPSRIRELVRKYCDFIPVPIKLNGEVINKQKPLWRTSPSELKDEDYLEFYRYLYPFQ EDPHFWVHINTDYPFIVQGILYFPKLRPDIDPTKGQVKLFCNQVFVQDNCEEVIPKFLLPLRGAIDSPDIPLNVSRSFLQ NDRTVRRIGDHVAKKVADRLNELYREDYEKYVKVWPDISLFMKFGAMNNDKFFAQIKDILIFRVAGSPADKPEYVTLKAY LERTRDKQNKRVYYATDEAAQSAYIDLHRSQGLEVIMLDSWIDSHFSSFLEREYKEEGIQFKRVDSELDETLVDKDKAAE IVDPVTQKTRSQKLVDLFRQALGKDKLQIQAEALKSESVPAMILLPETLRRLQELNAVIQQKPLEFLEEHTLVLNTAHPL IQNLQSLADQGRDPDLVHLICNHIYDLALITQKSFDPAAVRAFVQRSNEVLTRLTRPQ
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI155722983, Length=631, Percent_Identity=30.5863708399366, Blast_Score=297, Evalue=3e-80, Organism=Homo sapiens, GI4507677, Length=666, Percent_Identity=25.8258258258258, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI154146191, Length=249, Percent_Identity=32.9317269076305, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI153792590, Length=249, Percent_Identity=32.9317269076305, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI20149594, Length=249, Percent_Identity=30.5220883534137, Blast_Score=122, Evalue=7e-28, Organism=Escherichia coli, GI1786679, Length=636, Percent_Identity=30.3459119496855, Blast_Score=263, Evalue=2e-71, Organism=Caenorhabditis elegans, GI115535205, Length=627, Percent_Identity=28.3891547049442, Blast_Score=243, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17542208, Length=615, Percent_Identity=28.4552845528455, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI115535167, Length=411, Percent_Identity=31.1435523114355, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17559162, Length=492, Percent_Identity=29.2682926829268, Blast_Score=217, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6323840, Length=680, Percent_Identity=26.1764705882353, Blast_Score=212, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6325016, Length=684, Percent_Identity=26.3157894736842, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI24586016, Length=640, Percent_Identity=27.5, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI21357739, Length=638, Percent_Identity=27.4294670846395, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI17647529, Length=415, Percent_Identity=27.2289156626506, Blast_Score=146, Evalue=4e-35,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 71070; Mature: 70939
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLEQGSITIHTENIFPIIKQSLYSDREIFLRELISNAADAITKLKMASLAGEVADLPE CCEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEITIALNKEAKTLAVADNGIGMTAEEVKKYINQVAFSSAEEFIQKYKGKDAEQAIIGHF CCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLGFYSSFMVSQRVEIDTLSYRPGSTPVKWACDGTTTFTLSDSERSSIGTTVTLYITPEN HHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEEECCC EEYLEPSRIRELVRKYCDFIPVPIKLNGEVINKQKPLWRTSPSELKDEDYLEFYRYLYPF CCCCCHHHHHHHHHHHHCCCCCCEEECCEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCC QEDPHFWVHINTDYPFIVQGILYFPKLRPDIDPTKGQVKLFCNQVFVQDNCEEVIPKFLL CCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH PLRGAIDSPDIPLNVSRSFLQNDRTVRRIGDHVAKKVADRLNELYREDYEKYVKVWPDIS HHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LFMKFGAMNNDKFFAQIKDILIFRVAGSPADKPEYVTLKAYLERTRDKQNKRVYYATDEA HHHHHCCCCCCHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHCCCCCEEEEECCHH AQSAYIDLHRSQGLEVIMLDSWIDSHFSSFLEREYKEEGIQFKRVDSELDETLVDKDKAA HHHHHHEEHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHH EIVDPVTQKTRSQKLVDLFRQALGKDKLQIQAEALKSESVPAMILLPETLRRLQELNAVI HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHCCCCCEEEECHHHHHHHHHHHHHH QQKPLEFLEEHTLVLNTAHPLIQNLQSLADQGRDPDLVHLICNHIYDLALITQKSFDPAA HHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH VRAFVQRSNEVLTRLTRPQ HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVLEQGSITIHTENIFPIIKQSLYSDREIFLRELISNAADAITKLKMASLAGEVADLPE CEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEITIALNKEAKTLAVADNGIGMTAEEVKKYINQVAFSSAEEFIQKYKGKDAEQAIIGHF CCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLGFYSSFMVSQRVEIDTLSYRPGSTPVKWACDGTTTFTLSDSERSSIGTTVTLYITPEN HHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEEECCC EEYLEPSRIRELVRKYCDFIPVPIKLNGEVINKQKPLWRTSPSELKDEDYLEFYRYLYPF CCCCCHHHHHHHHHHHHCCCCCCEEECCEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCC QEDPHFWVHINTDYPFIVQGILYFPKLRPDIDPTKGQVKLFCNQVFVQDNCEEVIPKFLL CCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH PLRGAIDSPDIPLNVSRSFLQNDRTVRRIGDHVAKKVADRLNELYREDYEKYVKVWPDIS HHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LFMKFGAMNNDKFFAQIKDILIFRVAGSPADKPEYVTLKAYLERTRDKQNKRVYYATDEA HHHHHCCCCCCHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHCCCCCEEEEECCHH AQSAYIDLHRSQGLEVIMLDSWIDSHFSSFLEREYKEEGIQFKRVDSELDETLVDKDKAA HHHHHHEEHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHH EIVDPVTQKTRSQKLVDLFRQALGKDKLQIQAEALKSESVPAMILLPETLRRLQELNAVI HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHCCCCCEEEECHHHHHHHHHHHHHH QQKPLEFLEEHTLVLNTAHPLIQNLQSLADQGRDPDLVHLICNHIYDLALITQKSFDPAA HHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH VRAFVQRSNEVLTRLTRPQ HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10722592 [H]