| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608446
Identifier: 86608446
GI number: 86608446
Start: 1003217
End: 1004071
Strand: Reverse
Name: 86608446
Synonym: CYB_0967
Alternate gene names: NA
Gene position: 1004071-1003217 (Counterclockwise)
Preceding gene: 86608452
Following gene: 86608445
Centisome position: 32.96
GC content: 59.3
Gene sequence:
>855_bases ATGAGAATGACGCGTTGTAATGTAGTATCGCCTGTGCGCTCCCTCTGCCGCTGTGCAGCTCAGGTGGGCGGCGTAGCCGG GATCCTGATCGGAACAGCTTGGGGGGGTTTGGCTGTGACTCCTGTTTGGGCTCAGGAGAATGCCCTACTGGCTCAGGCAG CCGCAGGCCCCATGAGCCGGCAAGAGGTGGCGGAGCGGCTAAATCTGGTGCCTGTTTTTGCCATTGTGTCTCAGAACGGC ACCCCCGTTGTCGCCAATGTGGAGCGAGATGGCCGCACCATCCAAGTGGTTTCCTTCTGGCTGGATCAGGCCCAGGCCCA GCAAGTGTTGGAGCAGGTGAAAGCCAGCAACCCCGAGATAGCCAGTCAAGCCCGGGTGGTGCCTCTCTCGCTGGGGTATG CCTACGAAAAATCGGAAGAGGAGCGCGCCAAGAATAGTGACCTGTATTTTGAGGTGGTGCCTCGGGCTTCTGATGTGGAA GCAGCCAAGCAGGTGCTGAAGGAAACCGGTCAAGATGTGCCTGCAGAAGCGATTGGTGTGCCTCTGTTCTATGGCCGCTC CGGAGAGGGGCTGCTGACCATCGAGCAGGATGGCCATGAGGTGGTGCCCTTCTTCTTCGACCGCAACGATTTGCGGAGGG CTTTGGATCGAGCGGCAGCGCAGAACCCGGATGTAGTTGGAAAGACCCAGATTGAAGTGACCTCGCTGGCCATTGTGGTG GAGCGCATGTTGGCTCCCGACGCACAGGCCGATGTGCAGAAGATCGCTTTTATCCCCTCTCGCTCGGCGCTGGAGTATAT CCAATCCCTGGCCCGGCCTGCCAATCCTTCTGCAAGTCCCCAGCCTCAGCGTTAA
Upstream 100 bases:
>100_bases GTTTAATCTAGGCAGCTTTTGATTTGCCCCAGGCTGTTGGTTAGTACTTAGGAAGCTGACCCCATAGCAACCAGAACAAG GCGCGATGCCGGGAGTTGAG
Downstream 100 bases:
>100_bases CCTAAGCCCCTGATGGGATCCCCGTCTGCTCTGGTGAAGCGGTTAACAGAGTGGCGTGCCCAAGCCCTGAGGGCGGCAAA AGCGGCTGGGATCCCTGCCG
Product: chloroplast envelope protein translocase (CEPT or Tic-Toc) family protein
Products: NA
Alternate protein names: Envelope Protein Translocase Family Protein; Tic22-Like Family Protein; Tic22-Like Protein; Tic22-Like Family; Tic22-Like
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRMTRCNVVSPVRSLCRCAAQVGGVAGILIGTAWGGLAVTPVWAQENALLAQAAAGPMSRQEVAERLNLVPVFAIVSQNG TPVVANVERDGRTIQVVSFWLDQAQAQQVLEQVKASNPEIASQARVVPLSLGYAYEKSEEERAKNSDLYFEVVPRASDVE AAKQVLKETGQDVPAEAIGVPLFYGRSGEGLLTIEQDGHEVVPFFFDRNDLRRALDRAAAQNPDVVGKTQIEVTSLAIVV ERMLAPDAQADVQKIAFIPSRSALEYIQSLARPANPSASPQPQR
Sequences:
>Translated_284_residues MRMTRCNVVSPVRSLCRCAAQVGGVAGILIGTAWGGLAVTPVWAQENALLAQAAAGPMSRQEVAERLNLVPVFAIVSQNG TPVVANVERDGRTIQVVSFWLDQAQAQQVLEQVKASNPEIASQARVVPLSLGYAYEKSEEERAKNSDLYFEVVPRASDVE AAKQVLKETGQDVPAEAIGVPLFYGRSGEGLLTIEQDGHEVVPFFFDRNDLRRALDRAAAQNPDVVGKTQIEVTSLAIVV ERMLAPDAQADVQKIAFIPSRSALEYIQSLARPANPSASPQPQR >Mature_284_residues MRMTRCNVVSPVRSLCRCAAQVGGVAGILIGTAWGGLAVTPVWAQENALLAQAAAGPMSRQEVAERLNLVPVFAIVSQNG TPVVANVERDGRTIQVVSFWLDQAQAQQVLEQVKASNPEIASQARVVPLSLGYAYEKSEEERAKNSDLYFEVVPRASDVE AAKQVLKETGQDVPAEAIGVPLFYGRSGEGLLTIEQDGHEVVPFFFDRNDLRRALDRAAAQNPDVVGKTQIEVTSLAIVV ERMLAPDAQADVQKIAFIPSRSALEYIQSLARPANPSASPQPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30671; Mature: 30671
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTRCNVVSPVRSLCRCAAQVGGVAGILIGTAWGGLAVTPVWAQENALLAQAAAGPMSR CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCH QEVAERLNLVPVFAIVSQNGTPVVANVERDGRTIQVVSFWLDQAQAQQVLEQVKASNPEI HHHHHHHCCEEEEEEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCH ASQARVVPLSLGYAYEKSEEERAKNSDLYFEVVPRASDVEAAKQVLKETGQDVPAEAIGV HHCCEEEEEECCCHHCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCC PLFYGRSGEGLLTIEQDGHEVVPFFFDRNDLRRALDRAAAQNPDVVGKTQIEVTSLAIVV EEEECCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ERMLAPDAQADVQKIAFIPSRSALEYIQSLARPANPSASPQPQR HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRMTRCNVVSPVRSLCRCAAQVGGVAGILIGTAWGGLAVTPVWAQENALLAQAAAGPMSR CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCH QEVAERLNLVPVFAIVSQNGTPVVANVERDGRTIQVVSFWLDQAQAQQVLEQVKASNPEI HHHHHHHCCEEEEEEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCH ASQARVVPLSLGYAYEKSEEERAKNSDLYFEVVPRASDVEAAKQVLKETGQDVPAEAIGV HHCCEEEEEECCCHHCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCC PLFYGRSGEGLLTIEQDGHEVVPFFFDRNDLRRALDRAAAQNPDVVGKTQIEVTSLAIVV EEEECCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ERMLAPDAQADVQKIAFIPSRSALEYIQSLARPANPSASPQPQR HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA