| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608434
Identifier: 86608434
GI number: 86608434
Start: 993210
End: 995417
Strand: Direct
Name: 86608434
Synonym: CYB_0955
Alternate gene names: NA
Gene position: 993210-995417 (Clockwise)
Preceding gene: 86608430
Following gene: 86608435
Centisome position: 32.6
GC content: 61.14
Gene sequence:
>2208_bases ATGACCTACCCGCTGCACGTCGCCCTGGTTTGGCACCAACACCAACCCCTCTACAAAAGTCCGGTGGCGGGTAAATATCG CATGCCTTGGGTGCGCCTACACGGGATCAAAGATTACCTGGACTTGGTCTTGCTGCTGGAGCGCTATCCCCGCTTGCACC AAACGATTAACCTGGTGCCCTCCCTGATTCTACAGATCGAAGAGTATGTGGCCGGCTCGGCTTTTGATCCTTACCTGGAA CTGACCCTATCCCCTGTCGAAAAGCTCGGCCCCGATCAACTGCGCTTTGTGGTCGAGCGTTTTTTCGACAGCCACTACCC CACCATGATCGAGCCCTACCCCCGTTACCGGCAGCTCTACAACCAACGGGAATCTCAGGGGGTGAACTGGTGTCTGCAGT ACTGGACTCCGCAGGACTTCGGGGATCTGCTGGCCTGGCACAACCTGTCTTGGTTTGATCCTCTCTTTCAGGAGGATCCT GAGATTGAGGGCTGGATCAAAATGGGATCCGGTTTTACCCTGGCGGATCGGCAGCGGATCTACGCCAAGCAACAACAGAT CCTCGGCGCCATCTTGCCCCAGCACGCCAAACTGCAGAGCAACGGCCAACTGGAGCTGACCACCAGCCCCTATACCCACC CCATCTTGCCCCTGTTGGTGAGCGAGCGCTCGGCACGGGTGGCTCGGCCAGGGTTGCCTTTGCCTCGCTACCCCTTTCAC TGGGAGCAGGATGTCCACAGCCAACTGGAGCGGGCTAAGCAGATCTATCGGGAGCGCTTTGGCCGCGAGCCGCGGGGCCT GTGGCCTTCCGAGCAATCCGTAAGCCCTGCCATTGTGCCGATTGTGCAAAAACAGGGCTTTGAGTGGATCATCTCCGACG AAGGGGTTTTGGGGTGGAGCCTGGGTCAACCGTTTCACCGCGATGGGCAGGGCCACATTCTGGAGCCGGAGAAGCTCTAC CGCCCCTACCGCCTGGAAACCGAGCGGGGGGATCTGGCCATCGTCTTTCGGGATCACCGCCTTTCGGATTTGATCGGCTT CAGCTACAGCGCCATGCCCGCCGATGCTGCCGCCAAAGATCTCATCGGCCATCTGGAGAGCATCCGCAACCGCCTGCCCC AGGAGCAGCCCTGGCTGGTGACCATCGCTCTGGATGGGGAAAACTGCTGGGAGTACTACCCCCAAGATGGCCGGCCCTTC TTGGAAAACCTTTACACCCGCCTCAGCCAGCACTCCTCCCTGCGGCTGGTGACCGTTTCGGAGTTTCTGGATCAGTTTCC GCCCACCGAGTTTTTGCCGGCAGAGCAACTTCACAGCGGCTCCTGGATCGAGGCAGATTTCACCACCTGGATTGGGGATC CCGTCAAAAACCGCGCTTGGGAGCTCTTGGCTCAGGCCCGCCAGGTGATTCAGGATCATCCCCGCGCCAATCCCCAAGCC TGGGAAGCCCTCTGGGCCGCCGAGGGATCCGATTGGTTCTGGTGGTTTGGGGCAGGCCACTCCTCCGCCCATGATGCCGT TTTCGACCAGTTGTTTCGGGAGCACCTGCAGGCGCTCTACACTGCTTTGGGAGAGGCGGTGCCGACCGTGCTGCAATTTC CCCTGGAGGATCATGACGGCCTAGGGGATCGCCTGCCGCAGGGGTTTATCCACCCGGCCATCAACGGTCGTCCGGCAGAA CGGGAGTGGAGCCAAGCGGGGCGGGTGGAGATTGGAGCGGCCCGAGGCACCATGCACCGCAACAGCATTGTTCGTCGCCT CTGGTACGGGTTCGATCACTTCAACCTCTACCTGCGGCTGGATTTTAACTCGGTGGTGCAGCGGCCCAGGCAATTGCTGG TGCTGTGGTTCTACCCCAACCGTGTCACCGTCAACAGCCCCATTCCCCTGCAGGGGTTGCCGGCAGAAGCTCCTCTCAAC TACCACTACCGCCACCTGCTGCGGTTGTCGCTGCCGCCTCCCGGCACCGGCCAGCATCCGGCAGAGGTGCAAGCCCAGCT CTTGCAGGCAGGGGAGTACCACACCTGGCACGCCATCGGCCATCAAGTGAAGGCGGTGGTGGATGCCTGTTTGGAGGTGG CCATCCCCTGGAGCAATTTGGGCGCCCAGCCGGGTCAGGAGCTGCAATTTGTCATCCTGGCCGCGGATGGCGAGACCTTT CAGGAAGGGATCCCGCCCAAGGCCACCATTGCCCTGCGCAGACCCTGA
Upstream 100 bases:
>100_bases TTTTCCCCACCGGCAGCGCTCAGACATTCAAGAGTTTCTTACGATCGCGAGCCAGACAGATGGGCTAGTATCCGGGTGAT GGTTGGATCCGGTACCGCCC
Downstream 100 bases:
>100_bases GAGTGATGACCAGCAGAGCTTCAAGTTATGTCGCGCGATCTCTATCCCCCCATCGAGCCCTACGATCAAGGCTTTCTGGC GGTTTCCTCCCTCCACACCC
Product: glycosy hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Amylopullulanase; Glycoside Hydrolase; Glycosy Hydrolase Family Protein; Pullulanase; Family; Glycosyl Hydrolase Family; Alpha-Amylase/Alpha-Mannosidase; Membrane Bound Alpha-Amylase; Pullulanase Glycoside Hydrolase Family; Alpha-Dextran Endo-1 6-Alpha-Glucosidase; Alpha-Mannosidase; Amylopullulanase Related Protein
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MTYPLHVALVWHQHQPLYKSPVAGKYRMPWVRLHGIKDYLDLVLLLERYPRLHQTINLVPSLILQIEEYVAGSAFDPYLE LTLSPVEKLGPDQLRFVVERFFDSHYPTMIEPYPRYRQLYNQRESQGVNWCLQYWTPQDFGDLLAWHNLSWFDPLFQEDP EIEGWIKMGSGFTLADRQRIYAKQQQILGAILPQHAKLQSNGQLELTTSPYTHPILPLLVSERSARVARPGLPLPRYPFH WEQDVHSQLERAKQIYRERFGREPRGLWPSEQSVSPAIVPIVQKQGFEWIISDEGVLGWSLGQPFHRDGQGHILEPEKLY RPYRLETERGDLAIVFRDHRLSDLIGFSYSAMPADAAAKDLIGHLESIRNRLPQEQPWLVTIALDGENCWEYYPQDGRPF LENLYTRLSQHSSLRLVTVSEFLDQFPPTEFLPAEQLHSGSWIEADFTTWIGDPVKNRAWELLAQARQVIQDHPRANPQA WEALWAAEGSDWFWWFGAGHSSAHDAVFDQLFREHLQALYTALGEAVPTVLQFPLEDHDGLGDRLPQGFIHPAINGRPAE REWSQAGRVEIGAARGTMHRNSIVRRLWYGFDHFNLYLRLDFNSVVQRPRQLLVLWFYPNRVTVNSPIPLQGLPAEAPLN YHYRHLLRLSLPPPGTGQHPAEVQAQLLQAGEYHTWHAIGHQVKAVVDACLEVAIPWSNLGAQPGQELQFVILAADGETF QEGIPPKATIALRRP
Sequences:
>Translated_735_residues MTYPLHVALVWHQHQPLYKSPVAGKYRMPWVRLHGIKDYLDLVLLLERYPRLHQTINLVPSLILQIEEYVAGSAFDPYLE LTLSPVEKLGPDQLRFVVERFFDSHYPTMIEPYPRYRQLYNQRESQGVNWCLQYWTPQDFGDLLAWHNLSWFDPLFQEDP EIEGWIKMGSGFTLADRQRIYAKQQQILGAILPQHAKLQSNGQLELTTSPYTHPILPLLVSERSARVARPGLPLPRYPFH WEQDVHSQLERAKQIYRERFGREPRGLWPSEQSVSPAIVPIVQKQGFEWIISDEGVLGWSLGQPFHRDGQGHILEPEKLY RPYRLETERGDLAIVFRDHRLSDLIGFSYSAMPADAAAKDLIGHLESIRNRLPQEQPWLVTIALDGENCWEYYPQDGRPF LENLYTRLSQHSSLRLVTVSEFLDQFPPTEFLPAEQLHSGSWIEADFTTWIGDPVKNRAWELLAQARQVIQDHPRANPQA WEALWAAEGSDWFWWFGAGHSSAHDAVFDQLFREHLQALYTALGEAVPTVLQFPLEDHDGLGDRLPQGFIHPAINGRPAE REWSQAGRVEIGAARGTMHRNSIVRRLWYGFDHFNLYLRLDFNSVVQRPRQLLVLWFYPNRVTVNSPIPLQGLPAEAPLN YHYRHLLRLSLPPPGTGQHPAEVQAQLLQAGEYHTWHAIGHQVKAVVDACLEVAIPWSNLGAQPGQELQFVILAADGETF QEGIPPKATIALRRP >Mature_734_residues TYPLHVALVWHQHQPLYKSPVAGKYRMPWVRLHGIKDYLDLVLLLERYPRLHQTINLVPSLILQIEEYVAGSAFDPYLEL TLSPVEKLGPDQLRFVVERFFDSHYPTMIEPYPRYRQLYNQRESQGVNWCLQYWTPQDFGDLLAWHNLSWFDPLFQEDPE IEGWIKMGSGFTLADRQRIYAKQQQILGAILPQHAKLQSNGQLELTTSPYTHPILPLLVSERSARVARPGLPLPRYPFHW EQDVHSQLERAKQIYRERFGREPRGLWPSEQSVSPAIVPIVQKQGFEWIISDEGVLGWSLGQPFHRDGQGHILEPEKLYR PYRLETERGDLAIVFRDHRLSDLIGFSYSAMPADAAAKDLIGHLESIRNRLPQEQPWLVTIALDGENCWEYYPQDGRPFL ENLYTRLSQHSSLRLVTVSEFLDQFPPTEFLPAEQLHSGSWIEADFTTWIGDPVKNRAWELLAQARQVIQDHPRANPQAW EALWAAEGSDWFWWFGAGHSSAHDAVFDQLFREHLQALYTALGEAVPTVLQFPLEDHDGLGDRLPQGFIHPAINGRPAER EWSQAGRVEIGAARGTMHRNSIVRRLWYGFDHFNLYLRLDFNSVVQRPRQLLVLWFYPNRVTVNSPIPLQGLPAEAPLNY HYRHLLRLSLPPPGTGQHPAEVQAQLLQAGEYHTWHAIGHQVKAVVDACLEVAIPWSNLGAQPGQELQFVILAADGETFQ EGIPPKATIALRRP
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84678; Mature: 84547
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPLHVALVWHQHQPLYKSPVAGKYRMPWVRLHGIKDYLDLVLLLERYPRLHQTINLVP CCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH SLILQIEEYVAGSAFDPYLELTLSPVEKLGPDQLRFVVERFFDSHYPTMIEPYPRYRQLY HHHHHHHHHHCCCCCCCHHHEEECHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH NQRESQGVNWCLQYWTPQDFGDLLAWHNLSWFDPLFQEDPEIEGWIKMGSGFTLADRQRI HHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHH YAKQQQILGAILPQHAKLQSNGQLELTTSPYTHPILPLLVSERSARVARPGLPLPRYPFH HHHHHHHHHHHCCCHHCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCC WEQDVHSQLERAKQIYRERFGREPRGLWPSEQSVSPAIVPIVQKQGFEWIISDEGVLGWS CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHCCCCEEEEECCCEEEEC LGQPFHRDGQGHILEPEKLYRPYRLETERGDLAIVFRDHRLSDLIGFSYSAMPADAAAKD CCCCCCCCCCCCEECHHHHCCCEEEECCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHH LIGHLESIRNRLPQEQPWLVTIALDGENCWEYYPQDGRPFLENLYTRLSQHSSLRLVTVS HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEHH EFLDQFPPTEFLPAEQLHSGSWIEADFTTWIGDPVKNRAWELLAQARQVIQDHPRANPQA HHHHHCCCCCCCCHHHHCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH WEALWAAEGSDWFWWFGAGHSSAHDAVFDQLFREHLQALYTALGEAVPTVLQFPLEDHDG HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LGDRLPQGFIHPAINGRPAEREWSQAGRVEIGAARGTMHRNSIVRRLWYGFDHFNLYLRL CHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEE DFNSVVQRPRQLLVLWFYPNRVTVNSPIPLQGLPAEAPLNYHYRHLLRLSLPPPGTGQHP CHHHHHCCCHHEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCH AEVQAQLLQAGEYHTWHAIGHQVKAVVDACLEVAIPWSNLGAQPGQELQFVILAADGETF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEEECCCHH QEGIPPKATIALRRP HHCCCCCEEEEEECC >Mature Secondary Structure TYPLHVALVWHQHQPLYKSPVAGKYRMPWVRLHGIKDYLDLVLLLERYPRLHQTINLVP CCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH SLILQIEEYVAGSAFDPYLELTLSPVEKLGPDQLRFVVERFFDSHYPTMIEPYPRYRQLY HHHHHHHHHHCCCCCCCHHHEEECHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH NQRESQGVNWCLQYWTPQDFGDLLAWHNLSWFDPLFQEDPEIEGWIKMGSGFTLADRQRI HHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHH YAKQQQILGAILPQHAKLQSNGQLELTTSPYTHPILPLLVSERSARVARPGLPLPRYPFH HHHHHHHHHHHCCCHHCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCC WEQDVHSQLERAKQIYRERFGREPRGLWPSEQSVSPAIVPIVQKQGFEWIISDEGVLGWS CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHCCCCEEEEECCCEEEEC LGQPFHRDGQGHILEPEKLYRPYRLETERGDLAIVFRDHRLSDLIGFSYSAMPADAAAKD CCCCCCCCCCCCEECHHHHCCCEEEECCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHH LIGHLESIRNRLPQEQPWLVTIALDGENCWEYYPQDGRPFLENLYTRLSQHSSLRLVTVS HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEHH EFLDQFPPTEFLPAEQLHSGSWIEADFTTWIGDPVKNRAWELLAQARQVIQDHPRANPQA HHHHHCCCCCCCCHHHHCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH WEALWAAEGSDWFWWFGAGHSSAHDAVFDQLFREHLQALYTALGEAVPTVLQFPLEDHDG HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LGDRLPQGFIHPAINGRPAEREWSQAGRVEIGAARGTMHRNSIVRRLWYGFDHFNLYLRL CHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEE DFNSVVQRPRQLLVLWFYPNRVTVNSPIPLQGLPAEAPLNYHYRHLLRLSLPPPGTGQHP CHHHHHCCCHHEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCH AEVQAQLLQAGEYHTWHAIGHQVKAVVDACLEVAIPWSNLGAQPGQELQFVILAADGETF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEEECCCHH QEGIPPKATIALRRP HHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA