The gene/protein map for NC_012488 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is pip [H]

Identifier: 86608435

GI number: 86608435

Start: 995445

End: 996395

Strand: Direct

Name: pip [H]

Synonym: CYB_0956

Alternate gene names: 86608435

Gene position: 995445-996395 (Clockwise)

Preceding gene: 86608434

Following gene: 86608436

Centisome position: 32.67

GC content: 61.83

Gene sequence:

>951_bases
ATGTCGCGCGATCTCTATCCCCCCATCGAGCCCTACGATCAAGGCTTTCTGGCGGTTTCCTCCCTCCACACCCTGTACTA
CGAGCAGTGCGGCAACCCGGCAGGCAAGCCGGTGGTGTTTTTGCACGGGGGGCCTGGAGGCGGGATCGATCCCATCTACC
GGCAGTATTTCGATCCCAGCCGCTGGCGGGTGGTGCTGTTCGATCAGCGGGGCTGCGGGAAAAGTCGCCCCTATGCCGAG
CTGCGGGAGAACACCACCTGGGATCTGGTGGCGGATATCGAGAAGTTGCGCCAGCATCTGGGCATTGATCGCTGGTTTGT
GTTCGGGGGCAGCTGGGGCAGTGCCCTTGCCCTGGCCTATGGGCAAACCCACCCCCAATCCTGCCTAGGGTTTGTCTTGC
GGGGCATTTTTCTCTTGCGCCCTTTTGAGCTCCGCTGGTTTTACCAGTCGGGGGCCAGCTACTTTTTCCCCGATGCTTGG
GAACATTACCTGGAGCCGATCCCTCCCGAAGAGCGGGATGACCTGCTGGCAGCCTACCACCGCCGCCTAAACGACCCAGA
TCCCCAGGTACGGCTGAGGGCAGCTCGCGCCTGGTCCGTCTGGGAGGCCAGCACCAGCAAGTTGATCCCCAGCCCAGAGC
TCATCGAGCGCTTTGGTCGAGGAGAGTTTGCCGAGGCCTTTGCCCGCATTGAGTGCCATTACTTTGTCCACGGCGGTTTT
TTGGATCCGGAGGATCAGCTCCTCAGGGGGGTGGGGCGGCTGCGCCATCTGCCGGCGGTGATCGTCCAGGGACGTTACGA
CGTGGTGTGCCCTCCCATTTCTGCCTGGGAACTGCATCAGGCTTGGCCAGAAGCAGAGTTTCGGATGATCCCCGATGCCG
GACATTCCATCACTGAACCCGGAATCCGCACCGCCCTCCTGGAAGCCACCGATCGCTTTGCCGGTTTGTGA

Upstream 100 bases:

>100_bases
CCTGGCCGCGGATGGCGAGACCTTTCAGGAAGGGATCCCGCCCAAGGCCACCATTGCCCTGCGCAGACCCTGAGAGTGAT
GACCAGCAGAGCTTCAAGTT

Downstream 100 bases:

>100_bases
GCCCCGCCGAGCCAACCCAGTGCTGCCAGGGATCCCAAGACCTTGAAGAATTGCTACAGGAAGGCCGGCAAAACCTTGGG
ATCCAGCCCAGAAGCACGGC

Product: prolyl aminopeptidase

Products: NA

Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPSRWRVVLFDQRGCGKSRPYAE
LRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAYGQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAW
EHYLEPIPPEERDDLLAAYHRRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF
LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEPGIRTALLEATDRFAGL

Sequences:

>Translated_316_residues
MSRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPSRWRVVLFDQRGCGKSRPYAE
LRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAYGQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAW
EHYLEPIPPEERDDLLAAYHRRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF
LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEPGIRTALLEATDRFAGL
>Mature_315_residues
SRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPSRWRVVLFDQRGCGKSRPYAEL
RENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAYGQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAWE
HYLEPIPPEERDDLLAAYHRRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGFL
DPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEPGIRTALLEATDRFAGL

Specific function: Specifically catalyzes the removal of N-terminal proline residues from peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR005944
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.4.11.5 [H]

Molecular weight: Translated: 36116; Mature: 35985

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCC
RWRVVLFDQRGCGKSRPYAELRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAY
CEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEEHH
GQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAWEHYLEPIPPEERDDLLAAYH
CCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH
RRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF
HHCCCCCHHHEEEHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHEEEEEEEECCC
LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEP
CCCHHHHHHHHHHHHHCCHHEECCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCC
GIRTALLEATDRFAGL
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCC
RWRVVLFDQRGCGKSRPYAELRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAY
CEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEEHH
GQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAWEHYLEPIPPEERDDLLAAYH
CCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH
RRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF
HHCCCCCHHHEEEHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHEEEEEEEECCC
LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEP
CCCHHHHHHHHHHHHHCCHHEECCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCC
GIRTALLEATDRFAGL
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA