| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pip [H]
Identifier: 86608435
GI number: 86608435
Start: 995445
End: 996395
Strand: Direct
Name: pip [H]
Synonym: CYB_0956
Alternate gene names: 86608435
Gene position: 995445-996395 (Clockwise)
Preceding gene: 86608434
Following gene: 86608436
Centisome position: 32.67
GC content: 61.83
Gene sequence:
>951_bases ATGTCGCGCGATCTCTATCCCCCCATCGAGCCCTACGATCAAGGCTTTCTGGCGGTTTCCTCCCTCCACACCCTGTACTA CGAGCAGTGCGGCAACCCGGCAGGCAAGCCGGTGGTGTTTTTGCACGGGGGGCCTGGAGGCGGGATCGATCCCATCTACC GGCAGTATTTCGATCCCAGCCGCTGGCGGGTGGTGCTGTTCGATCAGCGGGGCTGCGGGAAAAGTCGCCCCTATGCCGAG CTGCGGGAGAACACCACCTGGGATCTGGTGGCGGATATCGAGAAGTTGCGCCAGCATCTGGGCATTGATCGCTGGTTTGT GTTCGGGGGCAGCTGGGGCAGTGCCCTTGCCCTGGCCTATGGGCAAACCCACCCCCAATCCTGCCTAGGGTTTGTCTTGC GGGGCATTTTTCTCTTGCGCCCTTTTGAGCTCCGCTGGTTTTACCAGTCGGGGGCCAGCTACTTTTTCCCCGATGCTTGG GAACATTACCTGGAGCCGATCCCTCCCGAAGAGCGGGATGACCTGCTGGCAGCCTACCACCGCCGCCTAAACGACCCAGA TCCCCAGGTACGGCTGAGGGCAGCTCGCGCCTGGTCCGTCTGGGAGGCCAGCACCAGCAAGTTGATCCCCAGCCCAGAGC TCATCGAGCGCTTTGGTCGAGGAGAGTTTGCCGAGGCCTTTGCCCGCATTGAGTGCCATTACTTTGTCCACGGCGGTTTT TTGGATCCGGAGGATCAGCTCCTCAGGGGGGTGGGGCGGCTGCGCCATCTGCCGGCGGTGATCGTCCAGGGACGTTACGA CGTGGTGTGCCCTCCCATTTCTGCCTGGGAACTGCATCAGGCTTGGCCAGAAGCAGAGTTTCGGATGATCCCCGATGCCG GACATTCCATCACTGAACCCGGAATCCGCACCGCCCTCCTGGAAGCCACCGATCGCTTTGCCGGTTTGTGA
Upstream 100 bases:
>100_bases CCTGGCCGCGGATGGCGAGACCTTTCAGGAAGGGATCCCGCCCAAGGCCACCATTGCCCTGCGCAGACCCTGAGAGTGAT GACCAGCAGAGCTTCAAGTT
Downstream 100 bases:
>100_bases GCCCCGCCGAGCCAACCCAGTGCTGCCAGGGATCCCAAGACCTTGAAGAATTGCTACAGGAAGGCCGGCAAAACCTTGGG ATCCAGCCCAGAAGCACGGC
Product: prolyl aminopeptidase
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPSRWRVVLFDQRGCGKSRPYAE LRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAYGQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAW EHYLEPIPPEERDDLLAAYHRRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEPGIRTALLEATDRFAGL
Sequences:
>Translated_316_residues MSRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPSRWRVVLFDQRGCGKSRPYAE LRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAYGQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAW EHYLEPIPPEERDDLLAAYHRRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEPGIRTALLEATDRFAGL >Mature_315_residues SRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPSRWRVVLFDQRGCGKSRPYAEL RENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAYGQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAWE HYLEPIPPEERDDLLAAYHRRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGFL DPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEPGIRTALLEATDRFAGL
Specific function: Specifically catalyzes the removal of N-terminal proline residues from peptides [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005944 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 36116; Mature: 35985
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCC RWRVVLFDQRGCGKSRPYAELRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAY CEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEEHH GQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAWEHYLEPIPPEERDDLLAAYH CCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH RRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF HHCCCCCHHHEEEHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHEEEEEEEECCC LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEP CCCHHHHHHHHHHHHHCCHHEECCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCC GIRTALLEATDRFAGL HHHHHHHHHHHHHCCC >Mature Secondary Structure SRDLYPPIEPYDQGFLAVSSLHTLYYEQCGNPAGKPVVFLHGGPGGGIDPIYRQYFDPS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCC RWRVVLFDQRGCGKSRPYAELRENTTWDLVADIEKLRQHLGIDRWFVFGGSWGSALALAY CEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEEHH GQTHPQSCLGFVLRGIFLLRPFELRWFYQSGASYFFPDAWEHYLEPIPPEERDDLLAAYH CCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH RRLNDPDPQVRLRAARAWSVWEASTSKLIPSPELIERFGRGEFAEAFARIECHYFVHGGF HHCCCCCHHHEEEHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHEEEEEEEECCC LDPEDQLLRGVGRLRHLPAVIVQGRYDVVCPPISAWELHQAWPEAEFRMIPDAGHSITEP CCCHHHHHHHHHHHHHCCHHEECCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCC GIRTALLEATDRFAGL HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA