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The map label for this gene is 86608433

Identifier: 86608433

GI number: 86608433

Start: 992536

End: 993054

Strand: Reverse

Name: 86608433

Synonym: CYB_0954

Alternate gene names: NA

Gene position: 993054-992536 (Counterclockwise)

Preceding gene: 86608440

Following gene: 86608432

Centisome position: 32.59

GC content: 58.38

Gene sequence:

>519_bases
ATGACTGCCGCTACCCACCTTCTGGAACAGTCGATCGTTGTCTTTTCCCAAAACTATTTGCCCATCAGCCGGGTCAATAT
CAAGCGGGCAATCGTGCTGCTGCTAACAGGCAAAGCCGAACCGCTCTCGATGATGAATGTGCCGGTGTGGAAGGTGCGCT
CCCCCAGCCAGGTCATTGAAGTGCCCGAACATATTCGCCTGACCATCAAGGGCAAAGAGCGCGCTTGGCGCGTGCCCCCT
GTGAATCGGCGGGAGGTTTTGCGGCGGGATCACCACACCTGCCAGTATTGTGGCACCACCCACAATTTGACCTTGGATCA
TGTCGTGCCCCTCTCCAAAGGGGGATCCCACAGTTGGGACAATGTGGTGACGGCTTGCGAACGCTGCAATCAACGCAAGG
GCAACCGCACCCCTGAAGAAGCCAACATGCCCCTGCGCAGCAAACCCCGTGCCCCTCTCCACCCGACGGTGGCTTTTGCG
GAGCAGTTCTGGCGCGAACACCAAAGTCGGCAAGAGTGA

Upstream 100 bases:

>100_bases
ATCGTAAGAAACTCTTGAATGTCTGAGCGCTGCCGGTGGGGAAAAGCTTGCCATTCGCAAGATTCCTCAGGAGAATGGCG
GCAAAAGGAAGAGCTGAGCC

Downstream 100 bases:

>100_bases
CATCCTCCCGGCGCTCATCCTATGGACAGAGCGCGGGCCACCCTTCCCGTCAGCAGGACGGAGTCCTTACCTCGCGGTCG
GGCATTCCTGCCCCACGCCA

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Restriction Endonuclease; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTAATHLLEQSIVVFSQNYLPISRVNIKRAIVLLLTGKAEPLSMMNVPVWKVRSPSQVIEVPEHIRLTIKGKERAWRVPP
VNRREVLRRDHHTCQYCGTTHNLTLDHVVPLSKGGSHSWDNVVTACERCNQRKGNRTPEEANMPLRSKPRAPLHPTVAFA
EQFWREHQSRQE

Sequences:

>Translated_172_residues
MTAATHLLEQSIVVFSQNYLPISRVNIKRAIVLLLTGKAEPLSMMNVPVWKVRSPSQVIEVPEHIRLTIKGKERAWRVPP
VNRREVLRRDHHTCQYCGTTHNLTLDHVVPLSKGGSHSWDNVVTACERCNQRKGNRTPEEANMPLRSKPRAPLHPTVAFA
EQFWREHQSRQE
>Mature_171_residues
TAATHLLEQSIVVFSQNYLPISRVNIKRAIVLLLTGKAEPLSMMNVPVWKVRSPSQVIEVPEHIRLTIKGKERAWRVPPV
NRREVLRRDHHTCQYCGTTHNLTLDHVVPLSKGGSHSWDNVVTACERCNQRKGNRTPEEANMPLRSKPRAPLHPTVAFAE
QFWREHQSRQE

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19777; Mature: 19646

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAATHLLEQSIVVFSQNYLPISRVNIKRAIVLLLTGKAEPLSMMNVPVWKVRSPSQVIE
CCHHHHHHHHHHHEEECCCCCHHHHHHCEEEEEEEECCCCCCEECCCCEEEECCCHHHHC
VPEHIRLTIKGKERAWRVPPVNRREVLRRDHHTCQYCGTTHNLTLDHVVPLSKGGSHSWD
CCCEEEEEEECCCCEECCCCCCHHHHHHHCCCCEECCCCCCCCCHHHEEECCCCCCCCHH
NVVTACERCNQRKGNRTPEEANMPLRSKPRAPLHPTVAFAEQFWREHQSRQE
HHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAATHLLEQSIVVFSQNYLPISRVNIKRAIVLLLTGKAEPLSMMNVPVWKVRSPSQVIE
CHHHHHHHHHHHEEECCCCCHHHHHHCEEEEEEEECCCCCCEECCCCEEEECCCHHHHC
VPEHIRLTIKGKERAWRVPPVNRREVLRRDHHTCQYCGTTHNLTLDHVVPLSKGGSHSWD
CCCEEEEEEECCCCEECCCCCCHHHHHHHCCCCEECCCCCCCCCHHHEEECCCCCCCCHH
NVVTACERCNQRKGNRTPEEANMPLRSKPRAPLHPTVAFAEQFWREHQSRQE
HHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA