Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is ygfJ [C]
Identifier: 86608408
GI number: 86608408
Start: 966778
End: 967392
Strand: Reverse
Name: ygfJ [C]
Synonym: CYB_0928
Alternate gene names: 86608408
Gene position: 967392-966778 (Counterclockwise)
Preceding gene: 86608409
Following gene: 86608407
Centisome position: 31.75
GC content: 61.3
Gene sequence:
>615_bases TTGGCAAATGAGCCGAAGCTGCATGCGCTGATCTTGGCGGCTGGGTTTTCCACGCGGATGGGAGAGCCGAAAGCCTTTCT GCCCTGGAAAGACGGGCAAACCCTGCTCTCTTACCAGATTTTTCAGTGGCGACAGGCGGGGTTTCAACCCTGGGTGGTGC TGGGATCCCAGCATTTGGCGGCAGCCCAACCCCACTTGGCAGGGGCAGAGGTGCTGGTCAATTCGGCTCCTGAGCTGGGC AAGACCCACTCCATTCGGGTAGGGGTGGAAGGGATCCCTGCCGATTTTCAGGTGCTGGCCATTTCGGCGGTGGATCAGCC CCGTCCGGCGTGGATCTACCACAGCTTGCTGGAGTACCATCTGCGCCATCGCGCTTGGGTTACTGTGCCGGTGCATCGAG GACGACGGGGGCACCCTACCCTGATCGACAGGCGCTTGCGGGAAAAGCTGTTGGATCTCCGAGAAGAAACCCTGGGCCTG CGCCGGTTGTTGCAGGATCTGGGCAGGCGGGTACAGGAGGTGGAGCTCTACACTCCTGAGATCTTCCTGGACTGCAATAC CCCTGCCGATATGGAGGCCGCTGCTGCCGGTTGCGACAGCGTTGCCCAGGAGTGA
Upstream 100 bases:
>100_bases GGGGCCATTCTCACCCCCTCGACGGATCCCCTTACCCAGAGCCTTTTGGCCGGGGCTGTGACGTTTCTATATTTGTTTGG CATTCTGCTGGTGAAGCTCC
Downstream 100 bases:
>100_bases GGGGATCCCCTTCAGCACTTGTCCTGCGACCGGTCGCCTCAGCGGTACCGAGCACTTCGGCGTTGCCCAGCAAGATGTTC TTCCCATTGCTCGTATGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MANEPKLHALILAAGFSTRMGEPKAFLPWKDGQTLLSYQIFQWRQAGFQPWVVLGSQHLAAAQPHLAGAEVLVNSAPELG KTHSIRVGVEGIPADFQVLAISAVDQPRPAWIYHSLLEYHLRHRAWVTVPVHRGRRGHPTLIDRRLREKLLDLREETLGL RRLLQDLGRRVQEVELYTPEIFLDCNTPADMEAAAAGCDSVAQE
Sequences:
>Translated_204_residues MANEPKLHALILAAGFSTRMGEPKAFLPWKDGQTLLSYQIFQWRQAGFQPWVVLGSQHLAAAQPHLAGAEVLVNSAPELG KTHSIRVGVEGIPADFQVLAISAVDQPRPAWIYHSLLEYHLRHRAWVTVPVHRGRRGHPTLIDRRLREKLLDLREETLGL RRLLQDLGRRVQEVELYTPEIFLDCNTPADMEAAAAGCDSVAQE >Mature_203_residues ANEPKLHALILAAGFSTRMGEPKAFLPWKDGQTLLSYQIFQWRQAGFQPWVVLGSQHLAAAQPHLAGAEVLVNSAPELGK THSIRVGVEGIPADFQVLAISAVDQPRPAWIYHSLLEYHLRHRAWVTVPVHRGRRGHPTLIDRRLREKLLDLREETLGLR RLLQDLGRRVQEVELYTPEIFLDCNTPADMEAAAAGCDSVAQE
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22889; Mature: 22757
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEPKLHALILAAGFSTRMGEPKAFLPWKDGQTLLSYQIFQWRQAGFQPWVVLGSQHLA CCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHH AAQPHLAGAEVLVNSAPELGKTHSIRVGVEGIPADFQVLAISAVDQPRPAWIYHSLLEYH HCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH LRHRAWVTVPVHRGRRGHPTLIDRRLREKLLDLREETLGLRRLLQDLGRRVQEVELYTPE HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCE IFLDCNTPADMEAAAAGCDSVAQE EEEECCCCCCHHHHHHCCHHHHCC >Mature Secondary Structure ANEPKLHALILAAGFSTRMGEPKAFLPWKDGQTLLSYQIFQWRQAGFQPWVVLGSQHLA CCCCCEEEEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHH AAQPHLAGAEVLVNSAPELGKTHSIRVGVEGIPADFQVLAISAVDQPRPAWIYHSLLEYH HCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH LRHRAWVTVPVHRGRRGHPTLIDRRLREKLLDLREETLGLRRLLQDLGRRVQEVELYTPE HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCE IFLDCNTPADMEAAAAGCDSVAQE EEEECCCCCCHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA