| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608278
Identifier: 86608278
GI number: 86608278
Start: 819559
End: 820029
Strand: Reverse
Name: 86608278
Synonym: CYB_0794
Alternate gene names: NA
Gene position: 820029-819559 (Counterclockwise)
Preceding gene: 86608284
Following gene: 86608277
Centisome position: 26.92
GC content: 55.63
Gene sequence:
>471_bases ATGACAGACACTCATCCCTGTGCCCCCTGTATTGTGAATACGGGAACTTTGGTGAACAAGCGGGATATTTACCGACTCCT ATCCGATTTGGCCCGTGTTCGCTACTTCGATATCGTCGATGGCTCAGTGCGGAAGCAAGGGGAAGGCTGCGTGGTGGATG TTTTTCAGGATCCCACTGCTGCCACACTGGTGGTAAACCGTAGCCTCTACTTAAATGTGAACAGCTTTGACTATGCCTGT CTGCGGGATCCCGCTTCCGAAGAAGAGATGGCCAACCTGGGCAAGGAGCAGCCGGGCGTGGTTATCGACTTGGTTCAGGA CGGACGTATTCTGCGCTTGGTTCCCCTGGTGGAGCCGCGTTCGGATCCCGAGGAGCTCTTGGGGGATAACCAGGCGTTGC GGGCAGCGGTGGATGTTTTGGCTGCGGGCTGGGGCATAGAAGAGGAAAACTCTTCCGACTCCTCAGATTGA
Upstream 100 bases:
>100_bases GCCGAGGACTGATGTTTTCGGAGATAGTTTGCAGACACTGTTGATGTTGCTTTCCTTTTGCCTACTCTCAATCTGTTGAC CTTTCGAGACCGACTGCTCT
Downstream 100 bases:
>100_bases GAGATCCTGACCTGAAAATATAGACCTCCAAACCCATCTCTTCCTGGCCTTGAAGTTGACCGGTGCGGTGTGACGCAAAT CATGCTCGGGAGGATGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTDTHPCAPCIVNTGTLVNKRDIYRLLSDLARVRYFDIVDGSVRKQGEGCVVDVFQDPTAATLVVNRSLYLNVNSFDYAC LRDPASEEEMANLGKEQPGVVIDLVQDGRILRLVPLVEPRSDPEELLGDNQALRAAVDVLAAGWGIEEENSSDSSD
Sequences:
>Translated_156_residues MTDTHPCAPCIVNTGTLVNKRDIYRLLSDLARVRYFDIVDGSVRKQGEGCVVDVFQDPTAATLVVNRSLYLNVNSFDYAC LRDPASEEEMANLGKEQPGVVIDLVQDGRILRLVPLVEPRSDPEELLGDNQALRAAVDVLAAGWGIEEENSSDSSD >Mature_155_residues TDTHPCAPCIVNTGTLVNKRDIYRLLSDLARVRYFDIVDGSVRKQGEGCVVDVFQDPTAATLVVNRSLYLNVNSFDYACL RDPASEEEMANLGKEQPGVVIDLVQDGRILRLVPLVEPRSDPEELLGDNQALRAAVDVLAAGWGIEEENSSDSSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17093; Mature: 16962
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTHPCAPCIVNTGTLVNKRDIYRLLSDLARVRYFDIVDGSVRKQGEGCVVDVFQDPTA CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHEEHEECCCCHHCCCCCCEEEEECCCCE ATLVVNRSLYLNVNSFDYACLRDPASEEEMANLGKEQPGVVIDLVQDGRILRLVPLVEPR EEEEEECEEEEEECCCCCHHHCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCC SDPEELLGDNQALRAAVDVLAAGWGIEEENSSDSSD CCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TDTHPCAPCIVNTGTLVNKRDIYRLLSDLARVRYFDIVDGSVRKQGEGCVVDVFQDPTA CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHEEHEECCCCHHCCCCCCEEEEECCCCE ATLVVNRSLYLNVNSFDYACLRDPASEEEMANLGKEQPGVVIDLVQDGRILRLVPLVEPR EEEEEECEEEEEECCCCCHHHCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCC SDPEELLGDNQALRAAVDVLAAGWGIEEENSSDSSD CCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA