| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608277
Identifier: 86608277
GI number: 86608277
Start: 818331
End: 819434
Strand: Reverse
Name: 86608277
Synonym: CYB_0793
Alternate gene names: NA
Gene position: 819434-818331 (Counterclockwise)
Preceding gene: 86608278
Following gene: 86608276
Centisome position: 26.9
GC content: 59.33
Gene sequence:
>1104_bases GTGAGGCTCTTTGCGTTTGGGGGTGGTGTGAAGGTTTTTTCGGGGCAGCGACAGCTTCTGGGGAAAGTATGGGGTCTGCG TCTGCTTGGATCCCTGGTGGCTGTGCTTCTGGTACTGGTGCTCAAGGCCTGCGGGGGAAGTGGTGGCTCCTCTTCTGTGA GTGTCATTCCCACTCCCATTCCAACCGTCATTCCCACTTCTACTCCAACTGTCGTTCTCACCCCTACTCCGACTGTCATT CCTGCCCCTTTGCCCTCGCCAACGACTGCCCCTGTTTCCCAGTTCACCATTGACGTTCGCTTTCCCGACAACAGTCTCAC TCCTACCCAGCAGTCGATCATCCGCAATGCCGCTCTGCGCTGGCAACAGATCATCGTTGGTGACCAGCCGGATCTGCCCC CCACCACCATTCGGGCCGACGAATGCGATCGAGGGTTTCCCAGCACGCCACTCAATTTCCCCATCGACGATCTGTTGGTG GAGGTGCGGGCCAGAAATCTCGGCGACGAGCGAATTTTGGGGGGAGCTGCTCCCTGTTTTGTACGGGCCTCTAATGGTCT GCCTTTTTACTCCGTAGTTCTGTTCAACAGTCAAAATCTATCTGCCCTGGAAGAACGAGGGGATCTGCCCATTACCGCCC TGCACGAGTTGGGCCATGCCTTGGGCTTCTTGCCCATCGTCTGGGATCCCAAGGGGCTAACGGTGGGCTTGGTGGGACGG GATCAGCCTACGCCCCCTGGCTACGATCCCCGCTTTATCGGCCCTAGGGCAGTCAGCGCCTTCACTAGGCTGGGAGGAAA CGCGCCCTCTGTGCCCTTGGAGAACCAGTTTGGGGAGGGATCCCGAGATTCCCATTGGCGGGAGAGCGTCTTGGGCCGCG AGCTGATGACCAGCCGCATCGACCGGGGGGTAGCCAACCCCTTAAGCATTCTCACCGTCGAAGCAATGGCAGATATCGGC TATGACGTGAACCCGGCAGCGGCGGATGGCTTTGCTTTGGGGCGCAGTAGAGGGATCCCTCAGCCTTTGGAACTGCAGGA GCTGGAGTTGATCCTGCCCCTACAGCAATTTGACGCCGAGGGCAGGCGGGTGGGGGATCCCTGA
Upstream 100 bases:
>100_bases CCTCCAAACCCATCTCTTCCTGGCCTTGAAGTTGACCGGTGCGGTGTGACGCAAATCATGCTCGGGAGGATGGTTGCAGC CGGTATGATCCAACTGGGCC
Downstream 100 bases:
>100_bases GAAAAAGAGCATATTTACTCATGGCCAAGATGCTGCTTCTTAACAATAATGAAGGTCAAGTTGTACAACTTCACAACTTC GACAATCTCTCACCTCATTT
Product: M8 family peptidase
Products: NA
Alternate protein names: Zinc Metalloendopeptidase; Pkd Domain Containing Protein; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MRLFAFGGGVKVFSGQRQLLGKVWGLRLLGSLVAVLLVLVLKACGGSGGSSSVSVIPTPIPTVIPTSTPTVVLTPTPTVI PAPLPSPTTAPVSQFTIDVRFPDNSLTPTQQSIIRNAALRWQQIIVGDQPDLPPTTIRADECDRGFPSTPLNFPIDDLLV EVRARNLGDERILGGAAPCFVRASNGLPFYSVVLFNSQNLSALEERGDLPITALHELGHALGFLPIVWDPKGLTVGLVGR DQPTPPGYDPRFIGPRAVSAFTRLGGNAPSVPLENQFGEGSRDSHWRESVLGRELMTSRIDRGVANPLSILTVEAMADIG YDVNPAAADGFALGRSRGIPQPLELQELELILPLQQFDAEGRRVGDP
Sequences:
>Translated_367_residues MRLFAFGGGVKVFSGQRQLLGKVWGLRLLGSLVAVLLVLVLKACGGSGGSSSVSVIPTPIPTVIPTSTPTVVLTPTPTVI PAPLPSPTTAPVSQFTIDVRFPDNSLTPTQQSIIRNAALRWQQIIVGDQPDLPPTTIRADECDRGFPSTPLNFPIDDLLV EVRARNLGDERILGGAAPCFVRASNGLPFYSVVLFNSQNLSALEERGDLPITALHELGHALGFLPIVWDPKGLTVGLVGR DQPTPPGYDPRFIGPRAVSAFTRLGGNAPSVPLENQFGEGSRDSHWRESVLGRELMTSRIDRGVANPLSILTVEAMADIG YDVNPAAADGFALGRSRGIPQPLELQELELILPLQQFDAEGRRVGDP >Mature_367_residues MRLFAFGGGVKVFSGQRQLLGKVWGLRLLGSLVAVLLVLVLKACGGSGGSSSVSVIPTPIPTVIPTSTPTVVLTPTPTVI PAPLPSPTTAPVSQFTIDVRFPDNSLTPTQQSIIRNAALRWQQIIVGDQPDLPPTTIRADECDRGFPSTPLNFPIDDLLV EVRARNLGDERILGGAAPCFVRASNGLPFYSVVLFNSQNLSALEERGDLPITALHELGHALGFLPIVWDPKGLTVGLVGR DQPTPPGYDPRFIGPRAVSAFTRLGGNAPSVPLENQFGEGSRDSHWRESVLGRELMTSRIDRGVANPLSILTVEAMADIG YDVNPAAADGFALGRSRGIPQPLELQELELILPLQQFDAEGRRVGDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39190; Mature: 39190
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFAFGGGVKVFSGQRQLLGKVWGLRLLGSLVAVLLVLVLKACGGSGGSSSVSVIPTPI CEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC PTVIPTSTPTVVLTPTPTVIPAPLPSPTTAPVSQFTIDVRFPDNSLTPTQQSIIRNAALR CCCCCCCCCEEEECCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH WQQIIVGDQPDLPPTTIRADECDRGFPSTPLNFPIDDLLVEVRARNLGDERILGGAAPCF HHHEEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCEE VRASNGLPFYSVVLFNSQNLSALEERGDLPITALHELGHALGFLPIVWDPKGLTVGLVGR EEECCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEECC DQPTPPGYDPRFIGPRAVSAFTRLGGNAPSVPLENQFGEGSRDSHWRESVLGRELMTSRI CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DRGVANPLSILTVEAMADIGYDVNPAAADGFALGRSRGIPQPLELQELELILPLQQFDAE HCCCCCCHHHEEHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHEEECHHHHCCC GRRVGDP CCCCCCC >Mature Secondary Structure MRLFAFGGGVKVFSGQRQLLGKVWGLRLLGSLVAVLLVLVLKACGGSGGSSSVSVIPTPI CEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC PTVIPTSTPTVVLTPTPTVIPAPLPSPTTAPVSQFTIDVRFPDNSLTPTQQSIIRNAALR CCCCCCCCCEEEECCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH WQQIIVGDQPDLPPTTIRADECDRGFPSTPLNFPIDDLLVEVRARNLGDERILGGAAPCF HHHEEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCEE VRASNGLPFYSVVLFNSQNLSALEERGDLPITALHELGHALGFLPIVWDPKGLTVGLVGR EEECCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEECC DQPTPPGYDPRFIGPRAVSAFTRLGGNAPSVPLENQFGEGSRDSHWRESVLGRELMTSRI CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DRGVANPLSILTVEAMADIGYDVNPAAADGFALGRSRGIPQPLELQELELILPLQQFDAE HCCCCCCHHHEEHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHEEECHHHHCCC GRRVGDP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA