| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608275
Identifier: 86608275
GI number: 86608275
Start: 817510
End: 817875
Strand: Reverse
Name: 86608275
Synonym: CYB_0791
Alternate gene names: NA
Gene position: 817875-817510 (Counterclockwise)
Preceding gene: 86608276
Following gene: 86608274
Centisome position: 26.84
GC content: 60.66
Gene sequence:
>366_bases ATGTCCGATCTCTCTTTCTCAGAACAAGAACGGCTGAAACAGCTTGAGCGTGAACTGGAGCAGGCGGCTGCAGCCTCTCG GGAGTCGGGAACATCCGTTGCGTCTCGGGGGAAAAGTGCCGTTCGAGCTTGGATTGAGACTTGGGGGCGTCCACTGGTGA CGGTCTTCGCCATTCTGGGCTGTATTCTTCTGGTTGGGCTGTTCTTCCGGGTTTTCGGCACTGTTCTCAGGTGGGCGGTG GTGGCGGGGTTGGGCTACCTGCTCTACGCCTGGGTGGTGGCACCGCGGCTGGGCCTTCCCACCGGAGCTAAGTCGAAGCC AGAGGACGGCGGTAGCGGTGCGGAGCACCATCTCGACAGCTTTTGA
Upstream 100 bases:
>100_bases TCCGGGCTATGGTTCAGGAGATCCCTTCGGCGCGGGCTTAGTCTGCCCATCTTCGGGAGCAGCTCGTAAGATGGAGGTGA AACGCTGGAGACTGCTCTCT
Downstream 100 bases:
>100_bases TGCCTAGGGATCCCTGGCGAGCCTATGCTTACCTGGCGGCGGCCATCTTGGGCTGGGCTACGGCTGCCAGCGCTTTTAAG TTTGGGTTGCGGTACCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSDLSFSEQERLKQLERELEQAAAASRESGTSVASRGKSAVRAWIETWGRPLVTVFAILGCILLVGLFFRVFGTVLRWAV VAGLGYLLYAWVVAPRLGLPTGAKSKPEDGGSGAEHHLDSF
Sequences:
>Translated_121_residues MSDLSFSEQERLKQLERELEQAAAASRESGTSVASRGKSAVRAWIETWGRPLVTVFAILGCILLVGLFFRVFGTVLRWAV VAGLGYLLYAWVVAPRLGLPTGAKSKPEDGGSGAEHHLDSF >Mature_120_residues SDLSFSEQERLKQLERELEQAAAASRESGTSVASRGKSAVRAWIETWGRPLVTVFAILGCILLVGLFFRVFGTVLRWAVV AGLGYLLYAWVVAPRLGLPTGAKSKPEDGGSGAEHHLDSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13120; Mature: 12989
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSFSEQERLKQLERELEQAAAASRESGTSVASRGKSAVRAWIETWGRPLVTVFAILG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH CILLVGLFFRVFGTVLRWAVVAGLGYLLYAWVVAPRLGLPTGAKSKPEDGGSGAEHHLDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC F C >Mature Secondary Structure SDLSFSEQERLKQLERELEQAAAASRESGTSVASRGKSAVRAWIETWGRPLVTVFAILG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH CILLVGLFFRVFGTVLRWAVVAGLGYLLYAWVVAPRLGLPTGAKSKPEDGGSGAEHHLDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA