| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608274
Identifier: 86608274
GI number: 86608274
Start: 816611
End: 817510
Strand: Reverse
Name: 86608274
Synonym: CYB_0790
Alternate gene names: NA
Gene position: 817510-816611 (Counterclockwise)
Preceding gene: 86608275
Following gene: 86608273
Centisome position: 26.83
GC content: 61.22
Gene sequence:
>900_bases ATGCCTAGGGATCCCTGGCGAGCCTATGCTTACCTGGCGGCGGCCATCTTGGGCTGGGCTACGGCTGCCAGCGCTTTTAA GTTTGGGTTGCGGTACCTGTCGCCGACGGTTCTGCTGATTTTTTCGGCCTTTAGCTCTTGCCTGATCCTGGGGATCGTTT TGGTGGTTACAGGGCGGGCAGGGTTCCTCGGCAAGCAGAGGGGATCCCAAATCCGCCTGTCGGCCCTTCAGGGGCTGCTC AACCCCTTCGGCTACTATGGGGTGTTGTTCCAGGCTTATGACCGTCTGTCGGCTCAGGCGGCGATGGCTCTGAATTACAC TTGGCCGCTGGTGCTGGCTCTTCTGGCGGTGCCGCTGCTGGGAGAGCGCTTCCGTTGGCGGCTGGTGTTGGCCTTGGGGG TGAGCCTGCTGGGGGTGGTGCTGGTGGCTACGGGGGGATCCTGGGGCACCTTGCAGGTGGAGGATCCCTGGGGGGTGCTG CTGGCGGTGGGCAGCTCTGGACTCTGGGCGCTCTATTGGCTACTCAATGTGCGGGATGGGCGAGATGCGGTGCTGAAGCT GTTTATGGGGTTTCTCTTCGGCAGCCTCTATGGCCTGCTACTGCTGCCGTTTCAGGAGGTCTCTTGGACAGTTGCGGGGC TGGGTTGGGCAGCTTACATTGGTCTGGCGGAGATGGGCTTAACTTTTGTGTTTTGGCTGCGGGCTTTGGAGTTGGCGGGC CACCGGGGATCCCTGGCCAACTGGGTGTATGTGACGCCCTTTTTGTCGTTGGGGTTGATTGCGGTGCTGTTGGGCGAGAC GATTGCGCTGGGATCTGTGGTGGGCCTGGGCTTGATCTTGGCGAGTAACTTGTGGGGATCCCATAGGGAAAAGCCCCCCG CGGATCCTGTTCTGTCCTGA
Upstream 100 bases:
>100_bases ACGCCTGGGTGGTGGCACCGCGGCTGGGCCTTCCCACCGGAGCTAAGTCGAAGCCAGAGGACGGCGGTAGCGGTGCGGAG CACCATCTCGACAGCTTTTG
Downstream 100 bases:
>100_bases GGCGGTTGCGTTCGCGCCAGCGGGACGGAGTCCTATCGCGTTAGCGGGACGGAGTCCTATCGCGTTAGCGGTGCAGAGCA CAATGAATCCCGTTCCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Domain-Containing Protein; Transporter Drug/Metabolite Exporter Family; DMT Family Permease; Drug/Metabolite Exporter Family Protein; DMT Superfamily Permease; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Transporter Permease; Permease DMT Superfamily; Permease Outative
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MPRDPWRAYAYLAAAILGWATAASAFKFGLRYLSPTVLLIFSAFSSCLILGIVLVVTGRAGFLGKQRGSQIRLSALQGLL NPFGYYGVLFQAYDRLSAQAAMALNYTWPLVLALLAVPLLGERFRWRLVLALGVSLLGVVLVATGGSWGTLQVEDPWGVL LAVGSSGLWALYWLLNVRDGRDAVLKLFMGFLFGSLYGLLLLPFQEVSWTVAGLGWAAYIGLAEMGLTFVFWLRALELAG HRGSLANWVYVTPFLSLGLIAVLLGETIALGSVVGLGLILASNLWGSHREKPPADPVLS
Sequences:
>Translated_299_residues MPRDPWRAYAYLAAAILGWATAASAFKFGLRYLSPTVLLIFSAFSSCLILGIVLVVTGRAGFLGKQRGSQIRLSALQGLL NPFGYYGVLFQAYDRLSAQAAMALNYTWPLVLALLAVPLLGERFRWRLVLALGVSLLGVVLVATGGSWGTLQVEDPWGVL LAVGSSGLWALYWLLNVRDGRDAVLKLFMGFLFGSLYGLLLLPFQEVSWTVAGLGWAAYIGLAEMGLTFVFWLRALELAG HRGSLANWVYVTPFLSLGLIAVLLGETIALGSVVGLGLILASNLWGSHREKPPADPVLS >Mature_298_residues PRDPWRAYAYLAAAILGWATAASAFKFGLRYLSPTVLLIFSAFSSCLILGIVLVVTGRAGFLGKQRGSQIRLSALQGLLN PFGYYGVLFQAYDRLSAQAAMALNYTWPLVLALLAVPLLGERFRWRLVLALGVSLLGVVLVATGGSWGTLQVEDPWGVLL AVGSSGLWALYWLLNVRDGRDAVLKLFMGFLFGSLYGLLLLPFQEVSWTVAGLGWAAYIGLAEMGLTFVFWLRALELAGH RGSLANWVYVTPFLSLGLIAVLLGETIALGSVVGLGLILASNLWGSHREKPPADPVLS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32276; Mature: 32144
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDPWRAYAYLAAAILGWATAASAFKFGLRYLSPTVLLIFSAFSSCLILGIVLVVTGRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFLGKQRGSQIRLSALQGLLNPFGYYGVLFQAYDRLSAQAAMALNYTWPLVLALLAVPLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GERFRWRLVLALGVSLLGVVLVATGGSWGTLQVEDPWGVLLAVGSSGLWALYWLLNVRDG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEHHHHHHCCCC RDAVLKLFMGFLFGSLYGLLLLPFQEVSWTVAGLGWAAYIGLAEMGLTFVFWLRALELAG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HRGSLANWVYVTPFLSLGLIAVLLGETIALGSVVGLGLILASNLWGSHREKPPADPVLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PRDPWRAYAYLAAAILGWATAASAFKFGLRYLSPTVLLIFSAFSSCLILGIVLVVTGRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFLGKQRGSQIRLSALQGLLNPFGYYGVLFQAYDRLSAQAAMALNYTWPLVLALLAVPLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GERFRWRLVLALGVSLLGVVLVATGGSWGTLQVEDPWGVLLAVGSSGLWALYWLLNVRDG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEHHHHHHCCCC RDAVLKLFMGFLFGSLYGLLLLPFQEVSWTVAGLGWAAYIGLAEMGLTFVFWLRALELAG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HRGSLANWVYVTPFLSLGLIAVLLGETIALGSVVGLGLILASNLWGSHREKPPADPVLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA