| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is mrp [H]
Identifier: 86608252
GI number: 86608252
Start: 790196
End: 791278
Strand: Direct
Name: mrp [H]
Synonym: CYB_0769
Alternate gene names: 86608252
Gene position: 790196-791278 (Clockwise)
Preceding gene: 86608244
Following gene: 86608258
Centisome position: 25.94
GC content: 60.76
Gene sequence:
>1083_bases ATGACCACCTCCACCCTTGATGCTGCTGCCATCCTTGAAGCGTTGCGCCCTGTTCAAGATCCGGAGCTGCGCCGCAGCCT GGTGGAACTGAACATGATCCGGGATATTCGCGTCGAGCCTGGGCGAGTGGCCTTTACCCTGGTGCTGACCACGCCGGCCT GCCCTTTGCGAGAATTCATTGTCGAGGAGTGCAAAGCTGCCATCCGCCAGCTGGCCCCCATCGAAGCCATTGATGTTACG GTAACGGCAGAAACCCCCCGTTCCCCTTCCCTGCCGAATCGCCAGTCCATCCCCGGTGTGCGCAACATCATCGCCATTTC CAGCGGCAAGGGGGGAGTGGGCAAAACTTCGGTGTCGGTAAATGTGGCCGTGGCGCTGGCCCAAAGTGGAGCGCGGGTGG GGCTGCTGGATGCCGATATTTACGGTCCCAATGTGCCGCTGATGCTGGGCCTGCAGGATCGGTCTCTGGTTGTGCAAAAA CGGGAAGATGGCGGCGAAGACATCTTCCCCTTGGAAAATTACGGCGTCAAGATGGTGTCGATGGGCCTCTTGGTGGGACG GGATCAGCCGGTGATCTGGCGGGGGCCAATGTTAAACGGGGTGATCCGGCAATTTCTCTATCAGGTGCAGTGGGGAGAGT TGGACTACTTGATTGTAGATATGCCCCCCGGCACCGGCGATGCCCAATTGACCCTAGTGCAGGCAGTGCCGCTGGCAGGA GCTGTGATCGTCACCACGCCACAATCGGTGGCCCTGCTGGACAGTCGCAAGGGCTTGAACATGTTTCGGCAGTTGGGGGT GCCCATCCTGGGTATTGTGGAAAACATGAGCTACTTCATCCCGCCCGACCTGCCGGATCGCCAGTACGATATTTTCGGCT CAGAAGGGGGAGAGACCACGGCCCGCGAGCTTGGTGTCCCGCTGCTGGGGCGGATCCCGTTGGAGATTGCCCTGCGCCAA GGGGGGGATGCGGGCCAGCCCATCGTCATCAGCCAGCCTGAGTCAGCCTCGGCCCAGGCGCTTCGGCAAATTGCCAAAAC CTTGGCAGGCCGTGTTTCGATGCTGGCTTTGGGGGCAGGCTAG
Upstream 100 bases:
>100_bases CGTGGCAGCCCGTTTTGGAGCTGTCCTTCCCTGCCGGCAAGAACCCGAGAAAAACCGATTAGAGTGAAATATGGACTGAC CCGCTGAGCCTTCCGATTCC
Downstream 100 bases:
>100_bases AAGCGCTCGGCTTCCACCAACGAGACCCCGAAGCTGCGTCCCCCCACCACAATCCCCTCTTGGGCCTTGCCGCGCACGGT TACAGTGCTGTTCATGGCCG
Product: CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTTSTLDAAAILEALRPVQDPELRRSLVELNMIRDIRVEPGRVAFTLVLTTPACPLREFIVEECKAAIRQLAPIEAIDVT VTAETPRSPSLPNRQSIPGVRNIIAISSGKGGVGKTSVSVNVAVALAQSGARVGLLDADIYGPNVPLMLGLQDRSLVVQK REDGGEDIFPLENYGVKMVSMGLLVGRDQPVIWRGPMLNGVIRQFLYQVQWGELDYLIVDMPPGTGDAQLTLVQAVPLAG AVIVTTPQSVALLDSRKGLNMFRQLGVPILGIVENMSYFIPPDLPDRQYDIFGSEGGETTARELGVPLLGRIPLEIALRQ GGDAGQPIVISQPESASAQALRQIAKTLAGRVSMLALGAG
Sequences:
>Translated_360_residues MTTSTLDAAAILEALRPVQDPELRRSLVELNMIRDIRVEPGRVAFTLVLTTPACPLREFIVEECKAAIRQLAPIEAIDVT VTAETPRSPSLPNRQSIPGVRNIIAISSGKGGVGKTSVSVNVAVALAQSGARVGLLDADIYGPNVPLMLGLQDRSLVVQK REDGGEDIFPLENYGVKMVSMGLLVGRDQPVIWRGPMLNGVIRQFLYQVQWGELDYLIVDMPPGTGDAQLTLVQAVPLAG AVIVTTPQSVALLDSRKGLNMFRQLGVPILGIVENMSYFIPPDLPDRQYDIFGSEGGETTARELGVPLLGRIPLEIALRQ GGDAGQPIVISQPESASAQALRQIAKTLAGRVSMLALGAG >Mature_359_residues TTSTLDAAAILEALRPVQDPELRRSLVELNMIRDIRVEPGRVAFTLVLTTPACPLREFIVEECKAAIRQLAPIEAIDVTV TAETPRSPSLPNRQSIPGVRNIIAISSGKGGVGKTSVSVNVAVALAQSGARVGLLDADIYGPNVPLMLGLQDRSLVVQKR EDGGEDIFPLENYGVKMVSMGLLVGRDQPVIWRGPMLNGVIRQFLYQVQWGELDYLIVDMPPGTGDAQLTLVQAVPLAGA VIVTTPQSVALLDSRKGLNMFRQLGVPILGIVENMSYFIPPDLPDRQYDIFGSEGGETTARELGVPLLGRIPLEIALRQG GDAGQPIVISQPESASAQALRQIAKTLAGRVSMLALGAG
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=260, Percent_Identity=49.2307692307692, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI6912540, Length=258, Percent_Identity=41.8604651162791, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI118572611, Length=286, Percent_Identity=40.5594405594406, Blast_Score=198, Evalue=8e-51, Organism=Escherichia coli, GI87082045, Length=344, Percent_Identity=41.5697674418605, Blast_Score=263, Evalue=1e-71, Organism=Caenorhabditis elegans, GI25143050, Length=260, Percent_Identity=40, Blast_Score=180, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6322188, Length=229, Percent_Identity=40.6113537117904, Blast_Score=179, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6321347, Length=260, Percent_Identity=35.3846153846154, Blast_Score=165, Evalue=8e-42, Organism=Drosophila melanogaster, GI221511043, Length=259, Percent_Identity=39.7683397683398, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24667611, Length=253, Percent_Identity=42.6877470355731, Blast_Score=198, Evalue=4e-51, Organism=Drosophila melanogaster, GI19921440, Length=270, Percent_Identity=37.7777777777778, Blast_Score=147, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38466; Mature: 38335
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTLDAAAILEALRPVQDPELRRSLVELNMIRDIRVEPGRVAFTLVLTTPACPLREFI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHH VEECKAAIRQLAPIEAIDVTVTAETPRSPSLPNRQSIPGVRNIIAISSGKGGVGKTSVSV HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE NVAVALAQSGARVGLLDADIYGPNVPLMLGLQDRSLVVQKREDGGEDIFPLENYGVKMVS EEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHCCEEEEE MGLLVGRDQPVIWRGPMLNGVIRQFLYQVQWGELDYLIVDMPPGTGDAQLTLVQAVPLAG EEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCC AVIVTTPQSVALLDSRKGLNMFRQLGVPILGIVENMSYFIPPDLPDRQYDIFGSEGGETT EEEEECCCCEEEECCCCHHHHHHHHCCCCEEHHHCCCEECCCCCCCCCEEEECCCCCCCH ARELGVPLLGRIPLEIALRQGGDAGQPIVISQPESASAQALRQIAKTLAGRVSMLALGAG HHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCC >Mature Secondary Structure TTSTLDAAAILEALRPVQDPELRRSLVELNMIRDIRVEPGRVAFTLVLTTPACPLREFI CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHH VEECKAAIRQLAPIEAIDVTVTAETPRSPSLPNRQSIPGVRNIIAISSGKGGVGKTSVSV HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE NVAVALAQSGARVGLLDADIYGPNVPLMLGLQDRSLVVQKREDGGEDIFPLENYGVKMVS EEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHCCEEEEE MGLLVGRDQPVIWRGPMLNGVIRQFLYQVQWGELDYLIVDMPPGTGDAQLTLVQAVPLAG EEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCC AVIVTTPQSVALLDSRKGLNMFRQLGVPILGIVENMSYFIPPDLPDRQYDIFGSEGGETT EEEEECCCCEEEECCCCHHHHHHHHCCCCEEHHHCCCEECCCCCCCCCEEEECCCCCCCH ARELGVPLLGRIPLEIALRQGGDAGQPIVISQPESASAQALRQIAKTLAGRVSMLALGAG HHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]