| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608244
Identifier: 86608244
GI number: 86608244
Start: 782480
End: 783010
Strand: Direct
Name: 86608244
Synonym: CYB_0761
Alternate gene names: NA
Gene position: 782480-783010 (Clockwise)
Preceding gene: 86608240
Following gene: 86608252
Centisome position: 25.68
GC content: 55.37
Gene sequence:
>531_bases TTGGTTCAGTTCGACTCCCAGGATCCCTATGAAGTCATTCACCGCTTCAAGCCAATTGCCGAGGTCCCTGAGCTGACCCG CGAGACCTACGTGCCGCGAGCTTCTACTCCCTTGCTGGATGCCATGGGGCGCGGCATCATCGACCTAGAAAAGAGCCTCA GCGAACTCAGCGAGGCAGATCGCCCGGCCAAGGTTGTGATGGTTGTGGTAACCGATGGGCAAGAGAATGCCAGTCGCGAG TTCCGCAAAGAGCAAATTGAGAAGATGATCAAGGAAAAAACCGAGAAGGAGAGCTGGCAGTTTGTCTTCTTAAGCGCCGA TCTGGCTGCCATTGGGGATGCCCAAACCGTTGGCTTCGCTCCCAGCGCGTCCTTGCTATATCAGAAGTCTAAATTGGGCA GCGCAGGAGCGTGGACTTCTCTCTCTCGGCGCACCTCCGAGTACCGATTGGCTGTTCGCCAGAGGCTTATGTTCCTTGAT GAAGACCGACAGCATCCCGACGATCCGAACAAGGGCAAGGAAGAAAGCTAA
Upstream 100 bases:
>100_bases ACCCTTTGTAACAGATTGCAAGCAAACCTTCACAAACAGATCACTGCACCCCAGAGTTAGATTTTCTACAGGAGCAGAAC CGGGAAGTGCCACCCTTACC
Downstream 100 bases:
>100_bases TCCCTCTGCGGATAGGGCTTTGTGGGCAGGTTGACACGGGAAGCCCCTCGGATCCAGGGAAAGGGGAAGTATTGCAATGA CCTCTGGGCCAGGGAGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MVQFDSQDPYEVIHRFKPIAEVPELTRETYVPRASTPLLDAMGRGIIDLEKSLSELSEADRPAKVVMVVVTDGQENASRE FRKEQIEKMIKEKTEKESWQFVFLSADLAAIGDAQTVGFAPSASLLYQKSKLGSAGAWTSLSRRTSEYRLAVRQRLMFLD EDRQHPDDPNKGKEES
Sequences:
>Translated_176_residues MVQFDSQDPYEVIHRFKPIAEVPELTRETYVPRASTPLLDAMGRGIIDLEKSLSELSEADRPAKVVMVVVTDGQENASRE FRKEQIEKMIKEKTEKESWQFVFLSADLAAIGDAQTVGFAPSASLLYQKSKLGSAGAWTSLSRRTSEYRLAVRQRLMFLD EDRQHPDDPNKGKEES >Mature_176_residues MVQFDSQDPYEVIHRFKPIAEVPELTRETYVPRASTPLLDAMGRGIIDLEKSLSELSEADRPAKVVMVVVTDGQENASRE FRKEQIEKMIKEKTEKESWQFVFLSADLAAIGDAQTVGFAPSASLLYQKSKLGSAGAWTSLSRRTSEYRLAVRQRLMFLD EDRQHPDDPNKGKEES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19937; Mature: 19937
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQFDSQDPYEVIHRFKPIAEVPELTRETYVPRASTPLLDAMGRGIIDLEKSLSELSEAD CCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCC RPAKVVMVVVTDGQENASREFRKEQIEKMIKEKTEKESWQFVFLSADLAAIGDAQTVGFA CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCCCC PSASLLYQKSKLGSAGAWTSLSRRTSEYRLAVRQRLMFLDEDRQHPDDPNKGKEES CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MVQFDSQDPYEVIHRFKPIAEVPELTRETYVPRASTPLLDAMGRGIIDLEKSLSELSEAD CCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCC RPAKVVMVVVTDGQENASREFRKEQIEKMIKEKTEKESWQFVFLSADLAAIGDAQTVGFA CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCCCC PSASLLYQKSKLGSAGAWTSLSRRTSEYRLAVRQRLMFLDEDRQHPDDPNKGKEES CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA