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The map label for this gene is rpfG [H]

Identifier: 86608211

GI number: 86608211

Start: 745337

End: 746554

Strand: Direct

Name: rpfG [H]

Synonym: CYB_0726

Alternate gene names: 86608211

Gene position: 745337-746554 (Clockwise)

Preceding gene: 86608208

Following gene: 86608212

Centisome position: 24.46

GC content: 57.39

Gene sequence:

>1218_bases
ATGAGCCTGCCCACCCCCTTCGGTCTTCACCCCAGCACAACCGAATTCGAGGCCTCGGATGCCCTGCGCCTCAGCCAGCG
TCTGATTCAAGTGGGGATCGCCCTCTCCTCAGAAACAGATCTGGGGCGGCTGCTGGAGTTGATCGTTGCTCAAGCCCGAG
AACTGACCCACTGTGATGGGGCCAGCCTCTTTGTCCGAGAGGGAGAAGAATTGCGGTTTTTCGTGGTCAACCGCCATGAG
GAGCTGCGGGATCTGCGCCTGCCCCTCAGCCCTTCCAGCATTGTGGGCTATGTGGTGCTCACCGGGGAGAGCCTGAATCT
GCCAGATGTCTACCACCTGCCCGCCGATCAGCCCTATGCTTTTAACCCACAGGTGGATCGGCAAACCGGCTATCGCACCC
GCTCCTTGCTCACTGTGCCCATGCGGGATCCCTCAGGAAAGATCCTCGGCGCCCTACAACTGTTGAACCGCCTAAAGCCG
GATCACCCCACCCCCCTAGCTCCTGACCAAGTGGCCGAGTGGAGCCAACCTTTTTCTGAGCTGGAAGTTAGCGTGGCAGA
AGCCCTAGCCTCCCAGGCGGCGGTTGCCTATCAAAACGTCCAATTGCGGGAAGAACTCAAATCTGCCCACTTCGAGACCA
TCTTCTGTCTGTCTGTGGCCGCAGAATACCGAGATCAAGATACCTCTTTTCACCTGAAGCGGATGAGCAACTACTCCCGC
ATCATCGCCAAACAGTTGGGCCTCTCCAGCCATGAGCAAGAGCTGATCTTCTACGCCAGTCCCATGCACGATGTGGGCAA
AATCGGGATCCCGGATGCCATCTTGCAAAAGCCGGGGCGTCTGACCCCAGAAGAGCGGCAGATCATGAACCGCCACCCTG
AGATTGGTTATGAGATCCTCAGCAAGTCCGACTCCGAGCTGATGAAAAAGAGCGCCATCATCGCTCTGACCCACCACGAG
AAGTTCGACGGCAGTGGGTATCCGCGCGGCCTCAAAGGAGAAGGGATCCCTCTAGAAGGGCGGATTGTGGCCTTAGCCGA
TGTATTCGATGCCTTGGCCAGCCGTCGCCCCTACAAAGAAGCCTGGGCTTTGAATGAGGTCTTTCAGTTTGTAGAGGACA
ACAGAGGCAGCCATTTCGATCCGCAAGTGGTGGCCGCCTTTAACCGAGGACGCAGCGAAATTCTGGAAATCTACCACCGC
TATCAAGAAACCCGCTAA

Upstream 100 bases:

>100_bases
TTCGGATACCCAGCCGGCGGCAGGAGAACTCTTGGGGGCGAATGACTCCGCCATTGTTTATTGTGAACGCTTAATGTGAA
CGCTTCTGACCAACCCTGCT

Downstream 100 bases:

>100_bases
ATCCAGCTCCAGATCAATCAGGGATCCAAGATACCAACCCAGAACATTCAGCTCCAAAGGGATCCGTCCCAGCAAACCGC
AAAGAAGGGATCCCAGGCCA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSLPTPFGLHPSTTEFEASDALRLSQRLIQVGIALSSETDLGRLLELIVAQARELTHCDGASLFVREGEELRFFVVNRHE
ELRDLRLPLSPSSIVGYVVLTGESLNLPDVYHLPADQPYAFNPQVDRQTGYRTRSLLTVPMRDPSGKILGALQLLNRLKP
DHPTPLAPDQVAEWSQPFSELEVSVAEALASQAAVAYQNVQLREELKSAHFETIFCLSVAAEYRDQDTSFHLKRMSNYSR
IIAKQLGLSSHEQELIFYASPMHDVGKIGIPDAILQKPGRLTPEERQIMNRHPEIGYEILSKSDSELMKKSAIIALTHHE
KFDGSGYPRGLKGEGIPLEGRIVALADVFDALASRRPYKEAWALNEVFQFVEDNRGSHFDPQVVAAFNRGRSEILEIYHR
YQETR

Sequences:

>Translated_405_residues
MSLPTPFGLHPSTTEFEASDALRLSQRLIQVGIALSSETDLGRLLELIVAQARELTHCDGASLFVREGEELRFFVVNRHE
ELRDLRLPLSPSSIVGYVVLTGESLNLPDVYHLPADQPYAFNPQVDRQTGYRTRSLLTVPMRDPSGKILGALQLLNRLKP
DHPTPLAPDQVAEWSQPFSELEVSVAEALASQAAVAYQNVQLREELKSAHFETIFCLSVAAEYRDQDTSFHLKRMSNYSR
IIAKQLGLSSHEQELIFYASPMHDVGKIGIPDAILQKPGRLTPEERQIMNRHPEIGYEILSKSDSELMKKSAIIALTHHE
KFDGSGYPRGLKGEGIPLEGRIVALADVFDALASRRPYKEAWALNEVFQFVEDNRGSHFDPQVVAAFNRGRSEILEIYHR
YQETR
>Mature_404_residues
SLPTPFGLHPSTTEFEASDALRLSQRLIQVGIALSSETDLGRLLELIVAQARELTHCDGASLFVREGEELRFFVVNRHEE
LRDLRLPLSPSSIVGYVVLTGESLNLPDVYHLPADQPYAFNPQVDRQTGYRTRSLLTVPMRDPSGKILGALQLLNRLKPD
HPTPLAPDQVAEWSQPFSELEVSVAEALASQAAVAYQNVQLREELKSAHFETIFCLSVAAEYRDQDTSFHLKRMSNYSRI
IAKQLGLSSHEQELIFYASPMHDVGKIGIPDAILQKPGRLTPEERQIMNRHPEIGYEILSKSDSELMKKSAIIALTHHEK
FDGSGYPRGLKGEGIPLEGRIVALADVFDALASRRPYKEAWALNEVFQFVEDNRGSHFDPQVVAAFNRGRSEILEIYHRY
QETR

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Homo sapiens, GI116536085, Length=173, Percent_Identity=29.4797687861272, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI4505657, Length=207, Percent_Identity=26.5700483091787, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI219802706, Length=207, Percent_Identity=26.5700483091787, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI226246591, Length=207, Percent_Identity=26.5700483091787, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161076955, Length=188, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI161076953, Length=188, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 45580; Mature: 45449

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPTPFGLHPSTTEFEASDALRLSQRLIQVGIALSSETDLGRLLELIVAQARELTHCDG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ASLFVREGEELRFFVVNRHEELRDLRLPLSPSSIVGYVVLTGESLNLPDVYHLPADQPYA
CEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCC
FNPQVDRQTGYRTRSLLTVPMRDPSGKILGALQLLNRLKPDHPTPLAPDQVAEWSQPFSE
CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHH
LEVSVAEALASQAAVAYQNVQLREELKSAHFETIFCLSVAAEYRDQDTSFHLKRMSNYSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IIAKQLGLSSHEQELIFYASPMHDVGKIGIPDAILQKPGRLTPEERQIMNRHPEIGYEIL
HHHHHHCCCCCCCEEEEEECCCHHCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHH
SKSDSELMKKSAIIALTHHEKFDGSGYPRGLKGEGIPLEGRIVALADVFDALASRRPYKE
CCCHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHH
AWALNEVFQFVEDNRGSHFDPQVVAAFNRGRSEILEIYHRYQETR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLPTPFGLHPSTTEFEASDALRLSQRLIQVGIALSSETDLGRLLELIVAQARELTHCDG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ASLFVREGEELRFFVVNRHEELRDLRLPLSPSSIVGYVVLTGESLNLPDVYHLPADQPYA
CEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCC
FNPQVDRQTGYRTRSLLTVPMRDPSGKILGALQLLNRLKPDHPTPLAPDQVAEWSQPFSE
CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHH
LEVSVAEALASQAAVAYQNVQLREELKSAHFETIFCLSVAAEYRDQDTSFHLKRMSNYSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IIAKQLGLSSHEQELIFYASPMHDVGKIGIPDAILQKPGRLTPEERQIMNRHPEIGYEIL
HHHHHHCCCCCCCEEEEEECCCHHCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHH
SKSDSELMKKSAIIALTHHEKFDGSGYPRGLKGEGIPLEGRIVALADVFDALASRRPYKE
CCCHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHH
AWALNEVFQFVEDNRGSHFDPQVVAAFNRGRSEILEIYHRYQETR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]