The gene/protein map for NC_011146 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608208

Identifier: 86608208

GI number: 86608208

Start: 742106

End: 742693

Strand: Direct

Name: 86608208

Synonym: CYB_0723

Alternate gene names: NA

Gene position: 742106-742693 (Clockwise)

Preceding gene: 86608203

Following gene: 86608211

Centisome position: 24.36

GC content: 58.5

Gene sequence:

>588_bases
ATGGCTACCGGCGCACAGTCTTCCCCCTCCCAACTCTGGCATGTGTTGGTGATCGATGATGAGCAGGGACGGCGGGCTGT
GGCCCTCAGTGCTGCCACCTATTCCATCGGCAGGGATCCCAGCAATGCGATTGTCATCGATTCGGCGGCGGTTTCCCGGC
AACACGCGCTGCTGCTGCGGCTACCCCACAAAGATGGCCAATATACCTACCGGCTGCTGGACGGCAATATCGAGGGCAAG
CGCAGCACCAACGGCGTCTCGGTGAATGGGCAGAGATGTTTGAGCTGGGATCTCAAGGATGGGGATCAGATCCTGTTGGG
GAATCAGGTGCGGATGCAGTACTGCATTCGCCAGTTGTCAGACGAAGATTTTCAGCGGTATCTCCAGTCTGTAAGCTTTC
GCAGCGTGAAGGCGGAGGTGGTGGATCGACGCTCCACAACCATGCAGCGGTTTGATCCGCCCTCGATGCAGGCAATTTTG
CCCCAAGAGGAGACGACGGAGAGAATTGACGTGAAGCCTCAACGCCGCAATCCGCTGCGGCTGCTGTTCCAGACCCTCTG
GGGGCGTTTGAGGGGGAAGCTGAGATAA

Upstream 100 bases:

>100_bases
TTGGGCAATGGCTGAGGTGTGGCTTCCAGCCCGCTAACACGAAAGGGGCCTGCACTGCAACTTCGACGGTCAACCCAGCT
CCCCCTCAAGGCCCCAGACC

Downstream 100 bases:

>100_bases
CTTAACCCTCGGGGATGCCCACCCGTTCTGAGTCTGGGAGCGATGACGCGGTCTCGTCGGTGCTGTCTTTGCGGTCTTGC
TCTGACGCTTCTGCCTGCAA

Product: FHA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MATGAQSSPSQLWHVLVIDDEQGRRAVALSAATYSIGRDPSNAIVIDSAAVSRQHALLLRLPHKDGQYTYRLLDGNIEGK
RSTNGVSVNGQRCLSWDLKDGDQILLGNQVRMQYCIRQLSDEDFQRYLQSVSFRSVKAEVVDRRSTTMQRFDPPSMQAIL
PQEETTERIDVKPQRRNPLRLLFQTLWGRLRGKLR

Sequences:

>Translated_195_residues
MATGAQSSPSQLWHVLVIDDEQGRRAVALSAATYSIGRDPSNAIVIDSAAVSRQHALLLRLPHKDGQYTYRLLDGNIEGK
RSTNGVSVNGQRCLSWDLKDGDQILLGNQVRMQYCIRQLSDEDFQRYLQSVSFRSVKAEVVDRRSTTMQRFDPPSMQAIL
PQEETTERIDVKPQRRNPLRLLFQTLWGRLRGKLR
>Mature_194_residues
ATGAQSSPSQLWHVLVIDDEQGRRAVALSAATYSIGRDPSNAIVIDSAAVSRQHALLLRLPHKDGQYTYRLLDGNIEGKR
STNGVSVNGQRCLSWDLKDGDQILLGNQVRMQYCIRQLSDEDFQRYLQSVSFRSVKAEVVDRRSTTMQRFDPPSMQAILP
QEETTERIDVKPQRRNPLRLLFQTLWGRLRGKLR

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR000253
- InterPro:   IPR000014
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00563 EAL; PF00498 FHA; PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 22209; Mature: 22077

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGAQSSPSQLWHVLVIDDEQGRRAVALSAATYSIGRDPSNAIVIDSAAVSRQHALLLR
CCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEECHHHCCCCEEEEE
LPHKDGQYTYRLLDGNIEGKRSTNGVSVNGQRCLSWDLKDGDQILLGNQVRMQYCIRQLS
ECCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEECCCCCCEEEECCHHHHHHHHHHCC
DEDFQRYLQSVSFRSVKAEVVDRRSTTMQRFDPPSMQAILPQEETTERIDVKPQRRNPLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHH
LLFQTLWGRLRGKLR
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATGAQSSPSQLWHVLVIDDEQGRRAVALSAATYSIGRDPSNAIVIDSAAVSRQHALLLR
CCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEECHHHCCCCEEEEE
LPHKDGQYTYRLLDGNIEGKRSTNGVSVNGQRCLSWDLKDGDQILLGNQVRMQYCIRQLS
ECCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEEECCCCCCEEEECCHHHHHHHHHHCC
DEDFQRYLQSVSFRSVKAEVVDRRSTTMQRFDPPSMQAILPQEETTERIDVKPQRRNPLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHH
LLFQTLWGRLRGKLR
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]