| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608176
Identifier: 86608176
GI number: 86608176
Start: 707359
End: 708489
Strand: Direct
Name: 86608176
Synonym: CYB_0690
Alternate gene names: NA
Gene position: 707359-708489 (Clockwise)
Preceding gene: 86608175
Following gene: 86608177
Centisome position: 23.22
GC content: 62.16
Gene sequence:
>1131_bases ATGAAAAGGAGACGATCCTGGCAGCGGCGACAGGTGCTGCAAGCGGGCGGAGCGCTGCTGGCTGCCTATGGGGTTGCCGG CTGTGGCCAGGAGTTTTTGAGTCAGCAGGGGAGTCGCAGCCCGGAAAATGCCGAGACGGGAAGCATGAACTTGTCAGAGC TGCTGGCCCGCTGGCAGGTGGGCATTGGCGAGGATCCCGGTCGCTTCCTCTGGGAAATCGAGTCGGATCCGCAGGTGGCG GCAGTGGCGCAGGGGTGGGATCCCCATTTCCTGAGCGGTTGGCTGAACAGCTTTGATCACCGCCAGGGAGATCTCTCCTT TTGGCGCAACTGGCACCAGGCTGGGCTCTTGCGGCAGTGGTTTGAGCGGGGCTATACCCTGCATGTCATCACCTGGGAAG ACGACACCCACCGCCCCTGCGGCGACTATCACATCTCCCCGCAATTTGTGGAGGACGTGGCCGAGCTGGCGGGCTATATT GCCCAAGCCAATCCTCAGGGCCGCCCTACCTATTGGAGCCTGGCCACGGAGTTTTCCTATTGGCGGATCCCAGCAGATAC CTACAACGCCGACACTGCTTTCTACTACCAAGCCCTGATGCGCAATGTCCTCAAAGCCCGACAGGCCATCAAAGAGCGGC TGCCAGAGGCCGAAGTGGCCCTGTGCTGGGGGGGCTGGATTGCCACCTTTGACGACCCTTCCCAGGGGGCAGGCCGCAGC ATGGTGGAGCCCTTTGCCGAGACTATGAGCCAAATGGACGGGATCGCCTTCCAGTCGATGCGCCAGCGGCGGCCCGGAGA GTTTAATCCAGAGTTGAACGGCCCGGATCCCGGTAACCCGGAGCAGATCCGCCTCTGTTGCCGCCTGTTTTCCCCCATCC ACTCCAACCTGATGTTGGCCCACTACGAGCCATCGATTAAGGACAAGCACCCCAGCGGCGGACGGGCCGACACCGTCCAT ACAGACTTTCAGCTCATGAGCCAGCCGGAGTGGCTGCAGGAAGTGTCTCAACTGGGGCTGCGGCGCTTTTCTCTCATGCA CTACGGCCTGTATAAGGGGGATCCCTTCGGAGCGCTGACCGCCGCTCGCCAATTCCGGGCACAGGTGGGCCTACCGGCTG CCACCTCATAG
Upstream 100 bases:
>100_bases TCAATTTTGAGGGGCTGCCGGGCTTCAGGGAGGTTTATAGCTCCCCCCAAGTGCGGCTGTGGGCTCGCCAACACCAAGAG GAACCGCAGGAGGAGAGGAG
Downstream 100 bases:
>100_bases TTAGCAGTCGTTCCAAAGCCGGTTTTGTCCCGGATCTTGGCCCAAATCTTGATCCTAGGGATACAATCCCCCTGAAGCTG CCGGGATCCCTGCCATGGAG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKRRRSWQRRQVLQAGGALLAAYGVAGCGQEFLSQQGSRSPENAETGSMNLSELLARWQVGIGEDPGRFLWEIESDPQVA AVAQGWDPHFLSGWLNSFDHRQGDLSFWRNWHQAGLLRQWFERGYTLHVITWEDDTHRPCGDYHISPQFVEDVAELAGYI AQANPQGRPTYWSLATEFSYWRIPADTYNADTAFYYQALMRNVLKARQAIKERLPEAEVALCWGGWIATFDDPSQGAGRS MVEPFAETMSQMDGIAFQSMRQRRPGEFNPELNGPDPGNPEQIRLCCRLFSPIHSNLMLAHYEPSIKDKHPSGGRADTVH TDFQLMSQPEWLQEVSQLGLRRFSLMHYGLYKGDPFGALTAARQFRAQVGLPAATS
Sequences:
>Translated_376_residues MKRRRSWQRRQVLQAGGALLAAYGVAGCGQEFLSQQGSRSPENAETGSMNLSELLARWQVGIGEDPGRFLWEIESDPQVA AVAQGWDPHFLSGWLNSFDHRQGDLSFWRNWHQAGLLRQWFERGYTLHVITWEDDTHRPCGDYHISPQFVEDVAELAGYI AQANPQGRPTYWSLATEFSYWRIPADTYNADTAFYYQALMRNVLKARQAIKERLPEAEVALCWGGWIATFDDPSQGAGRS MVEPFAETMSQMDGIAFQSMRQRRPGEFNPELNGPDPGNPEQIRLCCRLFSPIHSNLMLAHYEPSIKDKHPSGGRADTVH TDFQLMSQPEWLQEVSQLGLRRFSLMHYGLYKGDPFGALTAARQFRAQVGLPAATS >Mature_376_residues MKRRRSWQRRQVLQAGGALLAAYGVAGCGQEFLSQQGSRSPENAETGSMNLSELLARWQVGIGEDPGRFLWEIESDPQVA AVAQGWDPHFLSGWLNSFDHRQGDLSFWRNWHQAGLLRQWFERGYTLHVITWEDDTHRPCGDYHISPQFVEDVAELAGYI AQANPQGRPTYWSLATEFSYWRIPADTYNADTAFYYQALMRNVLKARQAIKERLPEAEVALCWGGWIATFDDPSQGAGRS MVEPFAETMSQMDGIAFQSMRQRRPGEFNPELNGPDPGNPEQIRLCCRLFSPIHSNLMLAHYEPSIKDKHPSGGRADTVH TDFQLMSQPEWLQEVSQLGLRRFSLMHYGLYKGDPFGALTAARQFRAQVGLPAATS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42614; Mature: 42614
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRRSWQRRQVLQAGGALLAAYGVAGCGQEFLSQQGSRSPENAETGSMNLSELLARWQV CCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC GIGEDPGRFLWEIESDPQVAAVAQGWDPHFLSGWLNSFDHRQGDLSFWRNWHQAGLLRQW CCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FERGYTLHVITWEDDTHRPCGDYHISPQFVEDVAELAGYIAQANPQGRPTYWSLATEFSY HHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCE WRIPADTYNADTAFYYQALMRNVLKARQAIKERLPEAEVALCWGGWIATFDDPSQGAGRS EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCHH MVEPFAETMSQMDGIAFQSMRQRRPGEFNPELNGPDPGNPEQIRLCCRLFSPIHSNLMLA HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEE HYEPSIKDKHPSGGRADTVHTDFQLMSQPEWLQEVSQLGLRRFSLMHYGLYKGDPFGALT ECCCCCCCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AARQFRAQVGLPAATS HHHHHHHHCCCCCCCC >Mature Secondary Structure MKRRRSWQRRQVLQAGGALLAAYGVAGCGQEFLSQQGSRSPENAETGSMNLSELLARWQV CCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC GIGEDPGRFLWEIESDPQVAAVAQGWDPHFLSGWLNSFDHRQGDLSFWRNWHQAGLLRQW CCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FERGYTLHVITWEDDTHRPCGDYHISPQFVEDVAELAGYIAQANPQGRPTYWSLATEFSY HHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCE WRIPADTYNADTAFYYQALMRNVLKARQAIKERLPEAEVALCWGGWIATFDDPSQGAGRS EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCHH MVEPFAETMSQMDGIAFQSMRQRRPGEFNPELNGPDPGNPEQIRLCCRLFSPIHSNLMLA HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEE HYEPSIKDKHPSGGRADTVHTDFQLMSQPEWLQEVSQLGLRRFSLMHYGLYKGDPFGALT ECCCCCCCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AARQFRAQVGLPAATS HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA