| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608175
Identifier: 86608175
GI number: 86608175
Start: 705842
End: 707362
Strand: Direct
Name: 86608175
Synonym: CYB_0689
Alternate gene names: NA
Gene position: 705842-707362 (Clockwise)
Preceding gene: 86608171
Following gene: 86608176
Centisome position: 23.17
GC content: 62.66
Gene sequence:
>1521_bases ATGCAGTTTCTCGGCTACAAGGGATCCGTGGCGGTTTTGGGGCCGGATCCGCGCCTGCCCATTGTGGGCACCACCTTTCC TCCCTTGCTGGTGCTGGCTACGGCCATTCTGGGACGATCCCCGCTGTTGCTGCAGACCATCTTGGGCTCTTTGCTGCTGG GCTGGGTGTGGCGGCAGTTACGCCGTTTGCCGGTGGAGGTGGGATGGTGCTGGCTGTGGGGTTTGTTGATGGTGGTGCAG CCGACTTTGATCTTGATGCTGCTGCGCAGCCCCGCTTGGACGGCCACCTCGCTTTTGCTGGGGGTAAACATGGCCTTGTT GTTTCCCCTGGCTGACGAGAAACGAGCAGCGGGGAAGTCAGTGGCGGCAGGGGATGAGCTGCCTATTACCCTGAGGCTGC TGCTCGTTGGGCTGGCGCTGGGGCCCCTGATGGTGCTGCGCTGGGAAAGCGGATGGCTGCTGCCCTGGGCGGGGATGCTG CTGCTGGTGGCCTTTCGCCGAGAAGTCTGGGGGTTTCGCTGGGCCTCGCTGTTGGTGGCCGGCTTTGTCAGCCTAGCCTT GATCCTGAGCTGGCTGTATGTGAATTGGCTGTCGGTAGGGGATCCCTGGGCTTTCACCTACCAGGTGGGCAGCGGTCTGC GGCTGCCGCAATTGCGGGAAGACTTGCAGCAGGCGGGTGGCTGGCGGGGGGTGCTGGAGGCTGGGAAATGGCTGGCGGTG CTGGCCCCTGCCTATCTGCTGTTGGGGCTGGGATCCCTGCTGGGCCGAGGCCCGGGTCGCTGGGTATGGGCTCTGGTCTG GGGGATGCCGCTGGTCATCCTGCTGGCTTCTCTAGGGCAGGGGCTGTTTTTGCGGGAGCTGAGCCGCTTTGGCCTTTTCT GGGTGCCGCTGCCTTTGCTGATGGGCGCCTACTTGTGTCGCGGAGCCGGCCCCGGCTGGGCTAAGCGCCTGTTGATCACT GCCCTCTTGGGGTTGAACTGCCTCACTGCCGGTTATGGGGTGAGCCAAGAGCCGGGTTTCTTCATGCCCCTGGTGGCCGA GGAGCGGGATCTCTGGGAGCGGCTGGTGGCAGGGTTAGTGCCCCTTAGTGGCGAGTTGGAAGCTGCCCAAAACCTGTATG AAGTAACCTCTGCTGGGCAAGCCCTAGAAGACTGGCGGAGGCTGCGGCAGGAAAAGCGCCAGGTTGGGCAGTATCTCTAT CGCCACCTGTTGCCCGGACAAAAAGTGCTGGTGGACGACGACATCCACTTTGAGGCTATCTTTTGGGCAAGGGATCCCCG CTCTTTCCTTACTCCTCACCAGTACGAGTTTGCCCTGGCCCTTCAGCATCCCCAGGAAAGGGTGGACTACCTCTTGGTAG CGGGGCTGGCGGATCCCTTGCGGAGCGCCGATCGCATCCTGCAATTTTGGCCTGAGCTCAATTTTGAGGGGCTGCCGGGC TTCAGGGAGGTTTATAGCTCCCCCCAAGTGCGGCTGTGGGCTCGCCAACACCAAGAGGAACCGCAGGAGGAGAGGAGATG A
Upstream 100 bases:
>100_bases GGCTTTCTTGCAGCTCTTCGGGTCTACCGGGATCCTGTTTCTGCTGCTGGCTAGCCTTCTGTGGGGTTTGAAGGAGGGCT GGGGCTGGGTGAGCTTGGAG
Downstream 100 bases:
>100_bases AAAGGAGACGATCCTGGCAGCGGCGACAGGTGCTGCAAGCGGGCGGAGCGCTGCTGGCTGCCTATGGGGTTGCCGGCTGT GGCCAGGAGTTTTTGAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MQFLGYKGSVAVLGPDPRLPIVGTTFPPLLVLATAILGRSPLLLQTILGSLLLGWVWRQLRRLPVEVGWCWLWGLLMVVQ PTLILMLLRSPAWTATSLLLGVNMALLFPLADEKRAAGKSVAAGDELPITLRLLLVGLALGPLMVLRWESGWLLPWAGML LLVAFRREVWGFRWASLLVAGFVSLALILSWLYVNWLSVGDPWAFTYQVGSGLRLPQLREDLQQAGGWRGVLEAGKWLAV LAPAYLLLGLGSLLGRGPGRWVWALVWGMPLVILLASLGQGLFLRELSRFGLFWVPLPLLMGAYLCRGAGPGWAKRLLIT ALLGLNCLTAGYGVSQEPGFFMPLVAEERDLWERLVAGLVPLSGELEAAQNLYEVTSAGQALEDWRRLRQEKRQVGQYLY RHLLPGQKVLVDDDIHFEAIFWARDPRSFLTPHQYEFALALQHPQERVDYLLVAGLADPLRSADRILQFWPELNFEGLPG FREVYSSPQVRLWARQHQEEPQEERR
Sequences:
>Translated_506_residues MQFLGYKGSVAVLGPDPRLPIVGTTFPPLLVLATAILGRSPLLLQTILGSLLLGWVWRQLRRLPVEVGWCWLWGLLMVVQ PTLILMLLRSPAWTATSLLLGVNMALLFPLADEKRAAGKSVAAGDELPITLRLLLVGLALGPLMVLRWESGWLLPWAGML LLVAFRREVWGFRWASLLVAGFVSLALILSWLYVNWLSVGDPWAFTYQVGSGLRLPQLREDLQQAGGWRGVLEAGKWLAV LAPAYLLLGLGSLLGRGPGRWVWALVWGMPLVILLASLGQGLFLRELSRFGLFWVPLPLLMGAYLCRGAGPGWAKRLLIT ALLGLNCLTAGYGVSQEPGFFMPLVAEERDLWERLVAGLVPLSGELEAAQNLYEVTSAGQALEDWRRLRQEKRQVGQYLY RHLLPGQKVLVDDDIHFEAIFWARDPRSFLTPHQYEFALALQHPQERVDYLLVAGLADPLRSADRILQFWPELNFEGLPG FREVYSSPQVRLWARQHQEEPQEERR >Mature_506_residues MQFLGYKGSVAVLGPDPRLPIVGTTFPPLLVLATAILGRSPLLLQTILGSLLLGWVWRQLRRLPVEVGWCWLWGLLMVVQ PTLILMLLRSPAWTATSLLLGVNMALLFPLADEKRAAGKSVAAGDELPITLRLLLVGLALGPLMVLRWESGWLLPWAGML LLVAFRREVWGFRWASLLVAGFVSLALILSWLYVNWLSVGDPWAFTYQVGSGLRLPQLREDLQQAGGWRGVLEAGKWLAV LAPAYLLLGLGSLLGRGPGRWVWALVWGMPLVILLASLGQGLFLRELSRFGLFWVPLPLLMGAYLCRGAGPGWAKRLLIT ALLGLNCLTAGYGVSQEPGFFMPLVAEERDLWERLVAGLVPLSGELEAAQNLYEVTSAGQALEDWRRLRQEKRQVGQYLY RHLLPGQKVLVDDDIHFEAIFWARDPRSFLTPHQYEFALALQHPQERVDYLLVAGLADPLRSADRILQFWPELNFEGLPG FREVYSSPQVRLWARQHQEEPQEERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56788; Mature: 56788
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLGYKGSVAVLGPDPRLPIVGTTFPPLLVLATAILGRSPLLLQTILGSLLLGWVWRQL CCCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RRLPVEVGWCWLWGLLMVVQPTLILMLLRSPAWTATSLLLGVNMALLFPLADEKRAAGKS HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCC VAAGDELPITLRLLLVGLALGPLMVLRWESGWLLPWAGMLLLVAFRREVWGFRWASLLVA CCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GFVSLALILSWLYVNWLSVGDPWAFTYQVGSGLRLPQLREDLQQAGGWRGVLEAGKWLAV HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCHHHHH LAPAYLLLGLGSLLGRGPGRWVWALVWGMPLVILLASLGQGLFLRELSRFGLFWVPLPLL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH MGAYLCRGAGPGWAKRLLITALLGLNCLTAGYGVSQEPGFFMPLVAEERDLWERLVAGLV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC PLSGELEAAQNLYEVTSAGQALEDWRRLRQEKRQVGQYLYRHLLPGQKVLVDDDIHFEAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE FWARDPRSFLTPHQYEFALALQHPQERVDYLLVAGLADPLRSADRILQFWPELNFEGLPG EEECCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FREVYSSPQVRLWARQHQEEPQEERR HHHHHCCCCEEHHHHHHCCCCHHHCC >Mature Secondary Structure MQFLGYKGSVAVLGPDPRLPIVGTTFPPLLVLATAILGRSPLLLQTILGSLLLGWVWRQL CCCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RRLPVEVGWCWLWGLLMVVQPTLILMLLRSPAWTATSLLLGVNMALLFPLADEKRAAGKS HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCC VAAGDELPITLRLLLVGLALGPLMVLRWESGWLLPWAGMLLLVAFRREVWGFRWASLLVA CCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GFVSLALILSWLYVNWLSVGDPWAFTYQVGSGLRLPQLREDLQQAGGWRGVLEAGKWLAV HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCHHHHH LAPAYLLLGLGSLLGRGPGRWVWALVWGMPLVILLASLGQGLFLRELSRFGLFWVPLPLL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH MGAYLCRGAGPGWAKRLLITALLGLNCLTAGYGVSQEPGFFMPLVAEERDLWERLVAGLV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC PLSGELEAAQNLYEVTSAGQALEDWRRLRQEKRQVGQYLYRHLLPGQKVLVDDDIHFEAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE FWARDPRSFLTPHQYEFALALQHPQERVDYLLVAGLADPLRSADRILQFWPELNFEGLPG EEECCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FREVYSSPQVRLWARQHQEEPQEERR HHHHHCCCCEEHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA