| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608160
Identifier: 86608160
GI number: 86608160
Start: 685997
End: 687097
Strand: Direct
Name: 86608160
Synonym: CYB_0674
Alternate gene names: NA
Gene position: 685997-687097 (Clockwise)
Preceding gene: 86608159
Following gene: 86608161
Centisome position: 22.52
GC content: 61.67
Gene sequence:
>1101_bases ATGCTAGGTGAGGAGACCCAGGCAGCGGTAACCCCTTCCGAGAGAGCCCGCTCAACATCCGCCGATGTGATTGTCATCGG GGCGGGAGTGGCCGGCTTGGTGTGTGCAAGGCAACTGCTGCGGGCAGGGCTCCAGGTTCTGGTGCTGGAAAAATCGGCAG GCTTGGGCGGGCGCATGGCCACCCGTCGAGTTGAGCACGCTGGGCAAACGGTGCCAGTGGATCATGGGGCTCAATACCTG ACTGCCGATTCGGATGGCTTTTATCGCTGGGTGAAGGAGCTGCTGGGCCTGGGGCTGCTGGCGGAATGGACGCGCTCGCT GCATGTGCTGGATCGAGAAGGGCTGCGCCCAGAGGATCCCAATGATGAAAAACCGCGCTATGTCTGCCCCCAGGGCATGA CAATGCTGGCCAAACACTTGGCTGCCCCGCTGTCGGTACACACCCAAACTCGTGTGGTCAGCCTCAAACCTTTGGCAACA AGCTGGCAATTGAGGGCGGAGAACGGCCAATGCTACGAGGCTGCTGCCCTGGTGGCGACAATTCCGGCCCCCCAGTTGCT GCCCCTGCTCCGGGAAGGGATCCCTTCGGCTGAAAACCTGTTGCCTCTGCTGGAATCCGCCCAGTATCAACCCTGCCTTG CGGTTTTGGCGGGCTACTCTGAGCATACGCCGCCTTGGAAGGGGATCAAGTGCTTGGAGGATCCGATGTTGGCCTGGCTG GGACTGGACAGCAGCAAGCGCCTGCAGCCGCTCCCGCCTGTGGTGGTCTTGCATGGGGGGGCGGAGTGGTCATCTCTGTA CTTGGAGGCCGGCCCCTCTGAGCTGGAAAAGGCCGGTCGAGAATTGCTGGCCCACGCAGCCCAACGGCTGGATCCCTGGT TGGCTTCGCCACAATGGATGCAGGTGCACCGTTGGCGCTACGCATTGCCTTTGGAAACCACGGGATTGGCCAGCTTAAGC ACCCGTGTGCCGGTTTCCGCTGCTGAGGGATTGCCTTTGGTTTGTGCCGGCGATTGGTGCGCCGGAGGGCGCGTAGAGGG GGCTTGGCTCTCAGGACACAATGCCGCCAAAACCTTGCTCGAAATGCTTTCTGGGAAATGA
Upstream 100 bases:
>100_bases ATCAAGGGAGAAGCCAAGCTCTTCGGAGAGAAGGGCAACAACCCCTTCGGCAAAGGCGGGAGCTGAACGTGCGGATCCGG TCACAGCTGGCAGGCTCAGT
Downstream 100 bases:
>100_bases GGGTATGCACAGGCCGACCCGGTCGGCAGGGCAAGTGCCTGACCTGGCGCAGGACAGAGATGACGGCAAGACCACTGGGA GGGTAGGCTGAGGGCCGCTG
Product: oxidoreductase, FAD-binding
Products: NA
Alternate protein names: Amine Oxidase; Transmembrane Protein; Deoxyribodipyrimidine Photolyase; NAD/FAD-Dependent Oxidoreductase-Like Protein; Amine Oxidase Flavin-Containing; Flavin-Containing Amine-Oxidoreductase; NAD/FAD-Dependent Oxidoreductase; NAD/FAD-Dependent Oxidoreductase-Like; NAD/Fad-Dependent Oxidoreductase Protein; FAD Dependent Oxidoreductase Domain Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLGEETQAAVTPSERARSTSADVIVIGAGVAGLVCARQLLRAGLQVLVLEKSAGLGGRMATRRVEHAGQTVPVDHGAQYL TADSDGFYRWVKELLGLGLLAEWTRSLHVLDREGLRPEDPNDEKPRYVCPQGMTMLAKHLAAPLSVHTQTRVVSLKPLAT SWQLRAENGQCYEAAALVATIPAPQLLPLLREGIPSAENLLPLLESAQYQPCLAVLAGYSEHTPPWKGIKCLEDPMLAWL GLDSSKRLQPLPPVVVLHGGAEWSSLYLEAGPSELEKAGRELLAHAAQRLDPWLASPQWMQVHRWRYALPLETTGLASLS TRVPVSAAEGLPLVCAGDWCAGGRVEGAWLSGHNAAKTLLEMLSGK
Sequences:
>Translated_366_residues MLGEETQAAVTPSERARSTSADVIVIGAGVAGLVCARQLLRAGLQVLVLEKSAGLGGRMATRRVEHAGQTVPVDHGAQYL TADSDGFYRWVKELLGLGLLAEWTRSLHVLDREGLRPEDPNDEKPRYVCPQGMTMLAKHLAAPLSVHTQTRVVSLKPLAT SWQLRAENGQCYEAAALVATIPAPQLLPLLREGIPSAENLLPLLESAQYQPCLAVLAGYSEHTPPWKGIKCLEDPMLAWL GLDSSKRLQPLPPVVVLHGGAEWSSLYLEAGPSELEKAGRELLAHAAQRLDPWLASPQWMQVHRWRYALPLETTGLASLS TRVPVSAAEGLPLVCAGDWCAGGRVEGAWLSGHNAAKTLLEMLSGK >Mature_366_residues MLGEETQAAVTPSERARSTSADVIVIGAGVAGLVCARQLLRAGLQVLVLEKSAGLGGRMATRRVEHAGQTVPVDHGAQYL TADSDGFYRWVKELLGLGLLAEWTRSLHVLDREGLRPEDPNDEKPRYVCPQGMTMLAKHLAAPLSVHTQTRVVSLKPLAT SWQLRAENGQCYEAAALVATIPAPQLLPLLREGIPSAENLLPLLESAQYQPCLAVLAGYSEHTPPWKGIKCLEDPMLAWL GLDSSKRLQPLPPVVVLHGGAEWSSLYLEAGPSELEKAGRELLAHAAQRLDPWLASPQWMQVHRWRYALPLETTGLASLS TRVPVSAAEGLPLVCAGDWCAGGRVEGAWLSGHNAAKTLLEMLSGK
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8922946, Length=329, Percent_Identity=25.8358662613982, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI237649117, Length=304, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39484; Mature: 39484
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGEETQAAVTPSERARSTSADVIVIGAGVAGLVCARQLLRAGLQVLVLEKSAGLGGRMA CCCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH TRRVEHAGQTVPVDHGAQYLTADSDGFYRWVKELLGLGLLAEWTRSLHVLDREGLRPEDP HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC NDEKPRYVCPQGMTMLAKHLAAPLSVHTQTRVVSLKPLATSWQLRAENGQCYEAAALVAT CCCCCCEECCCCHHHHHHHHCCCCEECCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHC IPAPQLLPLLREGIPSAENLLPLLESAQYQPCLAVLAGYSEHTPPWKGIKCLEDPMLAWL CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHEE GLDSSKRLQPLPPVVVLHGGAEWSSLYLEAGPSELEKAGRELLAHAAQRLDPWLASPQWM CCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHCCCCHHH QVHRWRYALPLETTGLASLSTRVPVSAAEGLPLVCAGDWCAGGRVEGAWLSGHNAAKTLL HHHCEEEECCCCCCCCCHHCCCCCCHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHH EMLSGK HHHCCC >Mature Secondary Structure MLGEETQAAVTPSERARSTSADVIVIGAGVAGLVCARQLLRAGLQVLVLEKSAGLGGRMA CCCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH TRRVEHAGQTVPVDHGAQYLTADSDGFYRWVKELLGLGLLAEWTRSLHVLDREGLRPEDP HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC NDEKPRYVCPQGMTMLAKHLAAPLSVHTQTRVVSLKPLATSWQLRAENGQCYEAAALVAT CCCCCCEECCCCHHHHHHHHCCCCEECCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHC IPAPQLLPLLREGIPSAENLLPLLESAQYQPCLAVLAGYSEHTPPWKGIKCLEDPMLAWL CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHEE GLDSSKRLQPLPPVVVLHGGAEWSSLYLEAGPSELEKAGRELLAHAAQRLDPWLASPQWM CCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHCCCCHHH QVHRWRYALPLETTGLASLSTRVPVSAAEGLPLVCAGDWCAGGRVEGAWLSGHNAAKTLL HHHCEEEECCCCCCCCCHHCCCCCCHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHH EMLSGK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA