Click here to switch to the map view.

The map label for this gene is csx3

Identifier: 86608090

GI number: 86608090

Start: 608339

End: 609307

Strand: Direct

Name: csx3

Synonym: CYB_0599

Alternate gene names: NA

Gene position: 608339-609307 (Clockwise)

Preceding gene: 86608088

Following gene: 86608091

Centisome position: 19.97

GC content: 61.51

Gene sequence:

>969_bases
ATGGCTGCTGTGGCACTGCATTTGCTTTCCGGCTGTCTGGCCGCTCGCGCCAGCGGGACGGAGTCCTTTCGCGCCAGCGG
GACGGAGTCCTTGGACCCTCGAAGATCCCATTCTTCGGAACTGTCTTTTCAGGTCATCGAAATTGAGCTGACCCGACCGG
ATCGCCTGGTTTTTCCAGAGGATTTGGCTCAGCTTCAGCTGCCTGCCGGGATCAATGCCCAGCTGGGGGTGGTTCTGACG
GGGCGGGCCCCCATTTGGCTGTATGGCTGGCTGGTGCATGAGTGCCACTTCACCCGTTGGGTGGCCTGTTATGACCCACG
CTTGGGCGCGGTGGTGGTCTCCAGCCATACCCCCGAAGTGCGGGTGGGCCAGGTCATCCCCTGGGTGCAGGGAAGGCCGG
GCAAGGCCTACGGCCCGCTGACGCGAACAGAATTGGCAGCGGCGGTGATGGTGGTGGGCCCCCCCGACAGTGGCAAAAGC
CGTCTTGCCCGCGCCCTCTTCGAAGCTCTGCTGCCGGAGCATCCCGATATTTATCTGCAACGGGCCCATTGGGATGGGGA
AGGCAATTGGACTTTAGACTTGCCACCAGAAGAGGCGAAGATCCTCAAGCACCAGTACCGGGGCTCTTTTACCCCCGAAT
TTTTCAGCTTCCATGCCCAGGCCATTCTGGCTTTGCGCCGGCAAAAGAGTTTGGTGATTGTGGATGTGGGCGGCAAGGTG
GATCCGCAAAAGCAGCCGATCCTGGAAGCCTGCTCCCACTACCTGGTGGTCAGCCGGGATCCCGAGGCTATCCCTCTCTG
GCACGAGTTTTGTCGAGACCGGGGCAATTTGCGCTGTGTGGCCATCCTGCACACCTCGCCCGGCCCTCCTCAAGTGCTCA
AAGACTCACCTGAGTTGGAAATTCGCTGGGATCCCAACTCTCCTCCCCCCGCGGAGCTGCTTCGGGCGGTGCGCCGCTTG
ATTGCCTAG

Upstream 100 bases:

>100_bases
GCAAGGCGCAAGTGAGAGCCTGACCACTCTGACATGAGTTGGAACCTTCCACTTCCAATCTCTTCCATACTGAAGTCAAC
CTGTCTCGTCAAATCTGCCC

Downstream 100 bases:

>100_bases
GGGTGCGGATTCAGAATTGGATGGGCGGGCGAGCCTTTTCGGAAACGGCGAGATTGAGAACCGGGAGATTGAGAACTGGG
AAAAGAAAAAGGAGAGGGTA

Product: CRISPR-associated Csx3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MAAVALHLLSGCLAARASGTESFRASGTESLDPRRSHSSELSFQVIEIELTRPDRLVFPEDLAQLQLPAGINAQLGVVLT
GRAPIWLYGWLVHECHFTRWVACYDPRLGAVVVSSHTPEVRVGQVIPWVQGRPGKAYGPLTRTELAAAVMVVGPPDSGKS
RLARALFEALLPEHPDIYLQRAHWDGEGNWTLDLPPEEAKILKHQYRGSFTPEFFSFHAQAILALRRQKSLVIVDVGGKV
DPQKQPILEACSHYLVVSRDPEAIPLWHEFCRDRGNLRCVAILHTSPGPPQVLKDSPELEIRWDPNSPPPAELLRAVRRL
IA

Sequences:

>Translated_322_residues
MAAVALHLLSGCLAARASGTESFRASGTESLDPRRSHSSELSFQVIEIELTRPDRLVFPEDLAQLQLPAGINAQLGVVLT
GRAPIWLYGWLVHECHFTRWVACYDPRLGAVVVSSHTPEVRVGQVIPWVQGRPGKAYGPLTRTELAAAVMVVGPPDSGKS
RLARALFEALLPEHPDIYLQRAHWDGEGNWTLDLPPEEAKILKHQYRGSFTPEFFSFHAQAILALRRQKSLVIVDVGGKV
DPQKQPILEACSHYLVVSRDPEAIPLWHEFCRDRGNLRCVAILHTSPGPPQVLKDSPELEIRWDPNSPPPAELLRAVRRL
IA
>Mature_321_residues
AAVALHLLSGCLAARASGTESFRASGTESLDPRRSHSSELSFQVIEIELTRPDRLVFPEDLAQLQLPAGINAQLGVVLTG
RAPIWLYGWLVHECHFTRWVACYDPRLGAVVVSSHTPEVRVGQVIPWVQGRPGKAYGPLTRTELAAAVMVVGPPDSGKSR
LARALFEALLPEHPDIYLQRAHWDGEGNWTLDLPPEEAKILKHQYRGSFTPEFFSFHAQAILALRRQKSLVIVDVGGKVD
PQKQPILEACSHYLVVSRDPEAIPLWHEFCRDRGNLRCVAILHTSPGPPQVLKDSPELEIRWDPNSPPPAELLRAVRRLI
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1864 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013409 [H]

Pfam domain/function: PF09620 Cas_csx3 [H]

EC number: NA

Molecular weight: Translated: 35750; Mature: 35619

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVALHLLSGCLAARASGTESFRASGTESLDPRRSHSSELSFQVIEIELTRPDRLVFPE
CHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEECHH
DLAQLQLPAGINAQLGVVLTGRAPIWLYGWLVHECHFTRWVACYDPRLGAVVVSSHTPEV
HHHHEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCE
RVGQVIPWVQGRPGKAYGPLTRTELAAAVMVVGPPDSGKSRLARALFEALLPEHPDIYLQ
EECCCCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEE
RAHWDGEGNWTLDLPPEEAKILKHQYRGSFTPEFFSFHAQAILALRRQKSLVIVDVGGKV
EEEECCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
DPQKQPILEACSHYLVVSRDPEAIPLWHEFCRDRGNLRCVAILHTSPGPPQVLKDSPELE
CCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHCCCCCEE
IRWDPNSPPPAELLRAVRRLIA
EEECCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
AAVALHLLSGCLAARASGTESFRASGTESLDPRRSHSSELSFQVIEIELTRPDRLVFPE
HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEECHH
DLAQLQLPAGINAQLGVVLTGRAPIWLYGWLVHECHFTRWVACYDPRLGAVVVSSHTPEV
HHHHEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCE
RVGQVIPWVQGRPGKAYGPLTRTELAAAVMVVGPPDSGKSRLARALFEALLPEHPDIYLQ
EECCCCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEE
RAHWDGEGNWTLDLPPEEAKILKHQYRGSFTPEFFSFHAQAILALRRQKSLVIVDVGGKV
EEEECCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
DPQKQPILEACSHYLVVSRDPEAIPLWHEFCRDRGNLRCVAILHTSPGPPQVLKDSPELE
CCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHCCCCCEE
IRWDPNSPPPAELLRAVRRLIA
EEECCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]