Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608091
Identifier: 86608091
GI number: 86608091
Start: 609411
End: 610202
Strand: Direct
Name: 86608091
Synonym: CYB_0600
Alternate gene names: NA
Gene position: 609411-610202 (Clockwise)
Preceding gene: 86608090
Following gene: 86608096
Centisome position: 20.0
GC content: 62.63
Gene sequence:
>792_bases ATGCTGGGAGCCATTGCCGGGGATGTTATCGGCTCTGTCCATGAGCACTCGGGCACCAAAACGAAGAACTTTCCGCTGTT CGTCGAGGCCAGCCAATTTACCGATGACACGGTTCTGACGGTCGCTGTGGCCGAGCGGCTGCTGCGGGGCGGTAGCTACG TCGATTGGTACCATGAGTACTTCCACGCCTACCCAGAGGCTGGGTACGGGAGCAGCTTCATCCACTGGGCCGAGCATCGC TGCCGTGAGCCGTACTACAGTTGGGGCAACGGAGCCGCCATGCGGGTTAGCCCCATTGGCATCGCCTGCAACACGCTGGA AGAAGTGCTGGCCCAGGCGCGGGCCAGTGCCGAGGTAACCCACAACCACCCGGAGGGCATCCGCGGCGCTCAGGCTACGG CAGCCGCCGTGTTTCTCGCCCGGTCAGGGTACACCAAGGCCGACATCAAGACGTACATCGAGCAAGAGTTCGGATACTGC CTATCCGAGCGGCTGGACGATATCCGGGAGCACTACTGCTTCGATGTCTCCTGTCAGGGCTCGGTGCCCCAGTCGATCAT CGCGTTCCTAGAGGCAGACGGTTTTGAAGACGCGGTGCGCAACGCCATCTCCCTTGGTGGAGACGCAGACACCATGGCCT GCATTGCCGGGGGCATTGCGGAGGCGTTTTTCGGCGGCGTGCCGGACGAGATCGCATCCCGGACGCTGGCCGTTTTGGAC GAGCGGTTGCACGGCGTTGTGTGCGAGTTCCAAGAGAGGTTTGCGGATCGCCTGACCAGGGGCTGCACCTGA
Upstream 100 bases:
>100_bases TGCGGATTCAGAATTGGATGGGCGGGCGAGCCTTTTCGGAAACGGCGAGATTGAGAACCGGGAGATTGAGAACTGGGAAA AGAAAAAGGAGAGGGTACTG
Downstream 100 bases:
>100_bases TGGCCAAGGTGTGTGGTTTTTGGGTTTTGGGTTGCCTTGTCGCCCTCTCGCTCCGTCAACTGCTCCAGGTTGGATTTACC GGTAAGCCGCCTCTGGGTTG
Product: ADP-ribosylglycohydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLGAIAGDVIGSVHEHSGTKTKNFPLFVEASQFTDDTVLTVAVAERLLRGGSYVDWYHEYFHAYPEAGYGSSFIHWAEHR CREPYYSWGNGAAMRVSPIGIACNTLEEVLAQARASAEVTHNHPEGIRGAQATAAAVFLARSGYTKADIKTYIEQEFGYC LSERLDDIREHYCFDVSCQGSVPQSIIAFLEADGFEDAVRNAISLGGDADTMACIAGGIAEAFFGGVPDEIASRTLAVLD ERLHGVVCEFQERFADRLTRGCT
Sequences:
>Translated_263_residues MLGAIAGDVIGSVHEHSGTKTKNFPLFVEASQFTDDTVLTVAVAERLLRGGSYVDWYHEYFHAYPEAGYGSSFIHWAEHR CREPYYSWGNGAAMRVSPIGIACNTLEEVLAQARASAEVTHNHPEGIRGAQATAAAVFLARSGYTKADIKTYIEQEFGYC LSERLDDIREHYCFDVSCQGSVPQSIIAFLEADGFEDAVRNAISLGGDADTMACIAGGIAEAFFGGVPDEIASRTLAVLD ERLHGVVCEFQERFADRLTRGCT >Mature_263_residues MLGAIAGDVIGSVHEHSGTKTKNFPLFVEASQFTDDTVLTVAVAERLLRGGSYVDWYHEYFHAYPEAGYGSSFIHWAEHR CREPYYSWGNGAAMRVSPIGIACNTLEEVLAQARASAEVTHNHPEGIRGAQATAAAVFLARSGYTKADIKTYIEQEFGYC LSERLDDIREHYCFDVSCQGSVPQSIIAFLEADGFEDAVRNAISLGGDADTMACIAGGIAEAFFGGVPDEIASRTLAVLD ERLHGVVCEFQERFADRLTRGCT
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI8923417, Length=307, Percent_Identity=28.6644951140065, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: NA
Molecular weight: Translated: 28692; Mature: 28692
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGAIAGDVIGSVHEHSGTKTKNFPLFVEASQFTDDTVLTVAVAERLLRGGSYVDWYHEY CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH FHAYPEAGYGSSFIHWAEHRCREPYYSWGNGAAMRVSPIGIACNTLEEVLAQARASAEVT HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHC HNHPEGIRGAQATAAAVFLARSGYTKADIKTYIEQEFGYCLSERLDDIREHYCFDVSCQG CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEECCC SVPQSIIAFLEADGFEDAVRNAISLGGDADTMACIAGGIAEAFFGGVPDEIASRTLAVLD CCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ERLHGVVCEFQERFADRLTRGCT HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLGAIAGDVIGSVHEHSGTKTKNFPLFVEASQFTDDTVLTVAVAERLLRGGSYVDWYHEY CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH FHAYPEAGYGSSFIHWAEHRCREPYYSWGNGAAMRVSPIGIACNTLEEVLAQARASAEVT HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHC HNHPEGIRGAQATAAAVFLARSGYTKADIKTYIEQEFGYCLSERLDDIREHYCFDVSCQG CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEECCC SVPQSIIAFLEADGFEDAVRNAISLGGDADTMACIAGGIAEAFFGGVPDEIASRTLAVLD CCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ERLHGVVCEFQERFADRLTRGCT HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]