Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is nadD [H]
Identifier: 86608039
GI number: 86608039
Start: 558958
End: 559566
Strand: Direct
Name: nadD [H]
Synonym: CYB_0547
Alternate gene names: 86608039
Gene position: 558958-559566 (Clockwise)
Preceding gene: 86608038
Following gene: 86608040
Centisome position: 18.35
GC content: 61.58
Gene sequence:
>609_bases ATGAAGCACCGCCGCATTGCCATTCTGGGTGGAACCTTCAACCCTGTACACCACGGCCATTTGATCATGGCAGAACAAGC TCTTTGGCAGTTTGACCTGGATCAGGTGCTGTGGATGCCGGCAGGGGATCCCCCCCACAAGCCTCTGGCCCCTGGCGCCA GCAAAGCCGACCGCTTGGCGATGGTCAAGCTGGCCATTGCCGACCACGAGCGCTTCGCCTGCTCAGAGCTGGAGATCCGC CGTTCGGGGCGCTCCTACACCATCGAGACACTGCGCACCCTCATCCAGGAGCAACCCAATACCCAGTGGTACTGGATCAT CGGCGTGGATGCTCTGCGGGACCTGCCCCAGTGGTATCAAGCGGAAGAACTGGCCCGCCTCTGCCATTGGATTGTTGCCC CACGGGTGGATGCCGGCGATGCCGCCCAGGTGCTGCAGGCGGTGGCCGCAAAGCTGCCCATCCAAGCCCAAATCCTGGAA GCCCCTACCCTGACGCTCTCTTCCACCTACCTGCGACAGCAAATCCAAAAGGGAGGGTCTATCCGCTACCTGGTGCCCCC TGCTGTGGAGCACTATATCCGTCAGCACCGCCTCTATCTGCAGCCCTAA
Upstream 100 bases:
>100_bases GCACTCAGGAAATTCAGGCTGCCTTGCAAGCTCTGCCCACCCACCCCCGCCCAACGGAAGACTGGCTGCGGGATGCCATC ACCTACCTGAGCCAGCAGCC
Downstream 100 bases:
>100_bases AGGAAAAAAGGGGGCGGATCCCCCCTCTAGAATCACCAAATTTTCGGGCTGGAGGCCCGCACCATAGCCGCAGGCTTGGT GTCGGGAGGAAAGCCCGCCT
Product: nicotinate (nicotinamide) nucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKHRRIAILGGTFNPVHHGHLIMAEQALWQFDLDQVLWMPAGDPPHKPLAPGASKADRLAMVKLAIADHERFACSELEIR RSGRSYTIETLRTLIQEQPNTQWYWIIGVDALRDLPQWYQAEELARLCHWIVAPRVDAGDAAQVLQAVAAKLPIQAQILE APTLTLSSTYLRQQIQKGGSIRYLVPPAVEHYIRQHRLYLQP
Sequences:
>Translated_202_residues MKHRRIAILGGTFNPVHHGHLIMAEQALWQFDLDQVLWMPAGDPPHKPLAPGASKADRLAMVKLAIADHERFACSELEIR RSGRSYTIETLRTLIQEQPNTQWYWIIGVDALRDLPQWYQAEELARLCHWIVAPRVDAGDAAQVLQAVAAKLPIQAQILE APTLTLSSTYLRQQIQKGGSIRYLVPPAVEHYIRQHRLYLQP >Mature_202_residues MKHRRIAILGGTFNPVHHGHLIMAEQALWQFDLDQVLWMPAGDPPHKPLAPGASKADRLAMVKLAIADHERFACSELEIR RSGRSYTIETLRTLIQEQPNTQWYWIIGVDALRDLPQWYQAEELARLCHWIVAPRVDAGDAAQVLQAVAAKLPIQAQILE APTLTLSSTYLRQQIQKGGSIRYLVPPAVEHYIRQHRLYLQP
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
Organism=Escherichia coli, GI1786858, Length=208, Percent_Identity=36.0576923076923, Blast_Score=106, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 22989; Mature: 22989
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHRRIAILGGTFNPVHHGHLIMAEQALWQFDLDQVLWMPAGDPPHKPLAPGASKADRLA CCCCEEEEECCCCCCCCCCEEEEHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCCHHHHH MVKLAIADHERFACSELEIRRSGRSYTIETLRTLIQEQPNTQWYWIIGVDALRDLPQWYQ HHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHH AEELARLCHWIVAPRVDAGDAAQVLQAVAAKLPIQAQILEAPTLTLSSTYLRQQIQKGGS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHCCCC IRYLVPPAVEHYIRQHRLYLQP EEEECCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKHRRIAILGGTFNPVHHGHLIMAEQALWQFDLDQVLWMPAGDPPHKPLAPGASKADRLA CCCCEEEEECCCCCCCCCCEEEEHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCCHHHHH MVKLAIADHERFACSELEIRRSGRSYTIETLRTLIQEQPNTQWYWIIGVDALRDLPQWYQ HHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHH AEELARLCHWIVAPRVDAGDAAQVLQAVAAKLPIQAQILEAPTLTLSSTYLRQQIQKGGS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHCCCC IRYLVPPAVEHYIRQHRLYLQP EEEECCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA