| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yqeK [H]
Identifier: 86607565
GI number: 86607565
Start: 74616
End: 75209
Strand: Reverse
Name: yqeK [H]
Synonym: CYB_0063
Alternate gene names: 86607565
Gene position: 75209-74616 (Counterclockwise)
Preceding gene: 86607566
Following gene: 86607564
Centisome position: 2.47
GC content: 57.91
Gene sequence:
>594_bases ATGGGCACTCAACTGGGGCGGGAAGAGGTGTTGGCCTGGCTACAGGAGCGGGTGTCTCCTCCTCGCCTCCGCCATATCTT GGGGGTAGAGGGGATGGCCCGACAGCTGGCGGCCCACTACGGGCTGGATGAGCAGAAAGCTGCTTGGGCAGGGCTGATGC ACGACTTGGCCAAGGCTTTCCCGCCGGAGCAACTGTTGCAAAGGGTGGCTCAGGAACGGGAGCTGGATGAAATTGAGCGG GCCGAACCTCACATCCTGCACGCTGAGGTGGGATCCCTGGTGGCGCGGGAGCAGTTTCAGGTACAGGATCCGGAGATTTT GGCGGCCATTGCCAACCACACGCTAGGGCAGCCCGGCATGGATCCCCTCAGTTGCGTGGTTTTCGTGGCCGATGCCCTGG AGCCGAATCGGGGCAGCAACCCAGAATTGGAGCGGTTGCGGCAGATGGCTTTTGTAGATTTGTCTAAAACCGTAGTGGGA GTATGTGACTTGAGCCTAAAATTTTTGCTAGACCGGAATCAGGTGGTTCATCCGCGCACGCTCATGACTCGGAATCATTT TTTGTTACATCCTTTAGAAAAAGCGGTGTCCTAG
Upstream 100 bases:
>100_bases AAACAAAAAGAGGGGAAAAAACGCATGAAGGCGGTGGGAACGGTGGATGTGCCCCAAGAAGCGTTTATGGCCGTGCTGAA GCTGCAGAATGACTAGGGCG
Downstream 100 bases:
>100_bases GTTAGCTCAGTCGTTTCAGGAGGGTTTTAGTTGCTACATCTCATGCCTGCCCCTGCTGGGGATCCCATCTATTGCATGGC GCTGAGTGCAGCTCGCGCGG
Product: HD domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MGTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAFPPEQLLQRVAQERELDEIER AEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGMDPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVG VCDLSLKFLLDRNQVVHPRTLMTRNHFLLHPLEKAVS
Sequences:
>Translated_197_residues MGTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAFPPEQLLQRVAQERELDEIER AEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGMDPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVG VCDLSLKFLLDRNQVVHPRTLMTRNHFLLHPLEKAVS >Mature_196_residues GTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAFPPEQLLQRVAQERELDEIERA EPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGMDPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVGV CDLSLKFLLDRNQVVHPRTLMTRNHFLLHPLEKAVS
Specific function: Unknown
COG id: COG1713
COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005249 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22107; Mature: 21976
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAF CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC PPEQLLQRVAQERELDEIERAEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGM CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC DPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVGVCDLSLKFLLDRNQVVHPRT CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LMTRNHFLLHPLEKAVS HHHCCCHHCCHHHHHCC >Mature Secondary Structure GTQLGREEVLAWLQERVSPPRLRHILGVEGMARQLAAHYGLDEQKAAWAGLMHDLAKAF CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC PPEQLLQRVAQERELDEIERAEPHILHAEVGSLVAREQFQVQDPEILAAIANHTLGQPGM CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC DPLSCVVFVADALEPNRGSNPELERLRQMAFVDLSKTVVGVCDLSLKFLLDRNQVVHPRT CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LMTRNHFLLHPLEKAVS HHHCCCHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]