| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607556
Identifier: 86607556
GI number: 86607556
Start: 66823
End: 67761
Strand: Reverse
Name: 86607556
Synonym: CYB_0054
Alternate gene names: NA
Gene position: 67761-66823 (Counterclockwise)
Preceding gene: 86607562
Following gene: 86607555
Centisome position: 2.22
GC content: 56.44
Gene sequence:
>939_bases GTGGGCCTCATTCACCAAACTTGGAAACTCAACACCTCTGAGGGATCCTTCATCGTCCAGCGCCTTCACCCCCGATTTGA TCCTGCTGTCACTGAAGATGGTCAAGCCATCGGCCAATGGCTGAGACAACACGGCTTCCCCGTCCCCCAATTCCGCCGCG CTCGCGATGGATCCCTGCACTTGTCCTGGGCAGAAGGGCTGTGGCGGGTCATGGATTGTCTGCCGGGATCCTGTCACCCA ACTCCTCCCAATTGGGGCTATCTGGAAGAGGCGGGGGCAGCCGTTGGACGCCTGCATCGACTCTTGGCCCAGATGGACTA TCGTTTTCGCTTCCAGATCCCGCATTTTCACGATACGGCTCACCTTTGGCAACAGCTACGCCAGTATGAGCCGGCCCCAG AAGTGCAGGCAGAATGGCAGTTTTTAATCGAAACTGTGCCCAATCTTCTGCTGCCCTCGGGGATCCCAACTCAAATCATC CACGCCGATCTCAAGTTCAACAACTTTTTGTTCGATGAGCAGGGGCGATTTGTGGGCCTGGTGGATCTGGACACCTTCAT GTATCACAATCTCTATGTTGAATTGGGGGATGCCCTGCGCTCCTGGGGCAAACGAGGAAATACCCTTCAGCCAGAGGCGA TCCTGGCCGGGTTGCGGGGCTATGCCCAAACCGGGAACTTGCACGCCCTACAACCGGAACTCCTTCTCCAAGGGATCCAA CTGATTACCCTGGAATTGGGGATGCGCTTTTTGCAGGATTGGTTTGAAGACGCCTACTGGAATTGGGATCCCCAGCGCTA CCCCAGCCGCAAAGCCCATAACCTGGCCCGCTGCCAACAGCAAATTTGCCTCTATCAAGACCTCACCCAGAGGGCACCCC AACTGTTGGAGTCCATGCGCGCCCTTTTGTCTTGTGAGCAGCGGAAAGAGGGAAGGTAG
Upstream 100 bases:
>100_bases TGAATAGATTTCTTCCTTGCCTATGCTTGACCTGACTTGGCTGGATCCCCTTGTCCAGCACTTTCAACTGGGGGATCCAG AGCCACCCGAAGCCATCCGA
Downstream 100 bases:
>100_bases CCAACAGGTTTGCCCAGCTTTTGACAGCTCGTTTTGGGATCTGCTACCGCGGCATAGGAATGAAACATTTCTAAATATTT CTGTGGCATTGCTTCCCGAC
Product: phosphotransferase family protein
Products: NA
Alternate protein names: Mucin-Desulfating Sulfatase; N-Acetylhexosamine-1-Kinase NahK; Phosphotransferase Family Protein
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MGLIHQTWKLNTSEGSFIVQRLHPRFDPAVTEDGQAIGQWLRQHGFPVPQFRRARDGSLHLSWAEGLWRVMDCLPGSCHP TPPNWGYLEEAGAAVGRLHRLLAQMDYRFRFQIPHFHDTAHLWQQLRQYEPAPEVQAEWQFLIETVPNLLLPSGIPTQII HADLKFNNFLFDEQGRFVGLVDLDTFMYHNLYVELGDALRSWGKRGNTLQPEAILAGLRGYAQTGNLHALQPELLLQGIQ LITLELGMRFLQDWFEDAYWNWDPQRYPSRKAHNLARCQQQICLYQDLTQRAPQLLESMRALLSCEQRKEGR
Sequences:
>Translated_312_residues MGLIHQTWKLNTSEGSFIVQRLHPRFDPAVTEDGQAIGQWLRQHGFPVPQFRRARDGSLHLSWAEGLWRVMDCLPGSCHP TPPNWGYLEEAGAAVGRLHRLLAQMDYRFRFQIPHFHDTAHLWQQLRQYEPAPEVQAEWQFLIETVPNLLLPSGIPTQII HADLKFNNFLFDEQGRFVGLVDLDTFMYHNLYVELGDALRSWGKRGNTLQPEAILAGLRGYAQTGNLHALQPELLLQGIQ LITLELGMRFLQDWFEDAYWNWDPQRYPSRKAHNLARCQQQICLYQDLTQRAPQLLESMRALLSCEQRKEGR >Mature_311_residues GLIHQTWKLNTSEGSFIVQRLHPRFDPAVTEDGQAIGQWLRQHGFPVPQFRRARDGSLHLSWAEGLWRVMDCLPGSCHPT PPNWGYLEEAGAAVGRLHRLLAQMDYRFRFQIPHFHDTAHLWQQLRQYEPAPEVQAEWQFLIETVPNLLLPSGIPTQIIH ADLKFNNFLFDEQGRFVGLVDLDTFMYHNLYVELGDALRSWGKRGNTLQPEAILAGLRGYAQTGNLHALQPELLLQGIQL ITLELGMRFLQDWFEDAYWNWDPQRYPSRKAHNLARCQQQICLYQDLTQRAPQLLESMRALLSCEQRKEGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36259; Mature: 36128
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS00108 PROTEIN_KINASE_ST
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLIHQTWKLNTSEGSFIVQRLHPRFDPAVTEDGQAIGQWLRQHGFPVPQFRRARDGSLH CCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEE LSWAEGLWRVMDCLPGSCHPTPPNWGYLEEAGAAVGRLHRLLAQMDYRFRFQIPHFHDTA EHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH HLWQQLRQYEPAPEVQAEWQFLIETVPNLLLPSGIPTQIIHADLKFNNFLFDEQGRFVGL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCEEECCCCCEEEE VDLDTFMYHNLYVELGDALRSWGKRGNTLQPEAILAGLRGYAQTGNLHALQPELLLQGIQ EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LITLELGMRFLQDWFEDAYWNWDPQRYPSRKAHNLARCQQQICLYQDLTQRAPQLLESMR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLSCEQRKEGR HHHHHHHHCCCC >Mature Secondary Structure GLIHQTWKLNTSEGSFIVQRLHPRFDPAVTEDGQAIGQWLRQHGFPVPQFRRARDGSLH CCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEE LSWAEGLWRVMDCLPGSCHPTPPNWGYLEEAGAAVGRLHRLLAQMDYRFRFQIPHFHDTA EHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH HLWQQLRQYEPAPEVQAEWQFLIETVPNLLLPSGIPTQIIHADLKFNNFLFDEQGRFVGL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCEEECCCCCEEEE VDLDTFMYHNLYVELGDALRSWGKRGNTLQPEAILAGLRGYAQTGNLHALQPELLLQGIQ EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LITLELGMRFLQDWFEDAYWNWDPQRYPSRKAHNLARCQQQICLYQDLTQRAPQLLESMR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLSCEQRKEGR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA