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The map label for this gene is 86607549

Identifier: 86607549

GI number: 86607549

Start: 59247

End: 61082

Strand: Reverse

Name: 86607549

Synonym: CYB_0047

Alternate gene names: NA

Gene position: 61082-59247 (Counterclockwise)

Preceding gene: 86607550

Following gene: 86607547

Centisome position: 2.0

GC content: 60.13

Gene sequence:

>1836_bases
ATGCCAACACCACGTTCTTCAGTTGCTTCTCGTTCTGTGATCCCACAATCCACCTCTTCCGTTCAGATGATTCCGCTGGG
CGGCGAGCGGGAGATCGGCAAAAACACATGGGCCTTCCGCTACGAGGACGACATTATCCTCTTGGATGCCGGTTTGGCTT
TTCCCGATGAGAGCATGCACGGCGTGAACATCGTGCTGCCGGACATGACCTACATCAAGCAAAACCGCGACAAAGTGCGG
GGGATGGTGGTTACCCACGGCCACGAAGATCACATCGGTGGCATCCCGTATCACCTGCGGGAGTTCGATATTCCGGTCAT
CTACGGCCCCAGATTGGCGCTGGCGCTGCTGGAAGAGAAACTGCGGGAGGTGGGCCTGCTCAACCGCACAGAGCTGCGTC
CTGTTGGCCCCCGTGAAATCGTTCCCTTGAGTAAGCACTTTTTTGCCGAATTCATTCGCAACACCCACTCTTTTGCCGAT
AGCTTTACGGTGGCTCTGCACACGCCTGTGGGCGTCATTATTCAGACCGGCGACTTTAAGATCGACCATACCCCCGTGGA
TGGGGAGTACTTCGACCTGCAGCGGTTGGCCGAACATGGGGAAAAGGGAGTGCTCTGCCTGATCAGCGACTCCACCAACG
CTGAAGTGCCGGGGTTCACCCCCTCTGAAGCCTCAGTGGTGCCCGGTCTCACCAAGGCCATTGCCGGAGCCAAAGGGCGG
GTGATCATCACTACCTTTGCTTCTTCGGTGCATCGTCTCAACTTGGTGCTGCAGATCGCCGAACAGCAGGGTCGGGTGGT
GTCTCTGCTGGGCCGCTCCATGCTGAATGTGGTGGCTCACGCGCGGCGTTTGGGCTACATCCGCTGCAAGGACGAGACGC
TGCAGCCGATGCATGTGATCAACAGCCTGCCGGATGACCGGGTGATCATCCTCACCACCGGATCCCAGGGAGAACCTCTA
GCTGCTCTCACCCGCATTGCCAACGGCGAGCACCCGCAGTTGCAAATCAAGCCAGGCGACACGGTGGTGTGGTCGGCCAA
CCCGATCCCTGGCAACACCATCGCGGTCTCGCGGGTCATCGACAAGCTGATGGAGCTGGGAGCCAATGTCATTTACGGCA
AAGACAAGGGCCTGCACGTTTCCGGCCACGGCTGCCAGGAAGACCAGAAGCTGATGATTGCCCTGACCCGCCCCAAGTTC
TTCGTTCCCACCCACGGGGAATACCGCATGCTGGTCAAGCACGCCGAAACCGCCATGAGCATGGGGATCCCGCGGGAAAA
CATTGTAATCATCGACAACGGCGATGTGGTGGAGGTGAACCGGGAGCGCATTGCCATCACGGGCCGCGTCCCCTCTGGCC
TGCAGATGATCGCCGCTTCCCACGATGGAGTGGTGATGGATGAGATGCTGCAGGAGCGGCAGCAGATCGCCAAAGATGGC
ATGGTGACGGTGGTGATCAGCCTGGACGGCAGCGGCCAGTTGCTCTGCACCCCGCAGGTGCAAACCTTTGGCTTGGCGGG
GGAAGGGAACCAACTCAAGGGATCCGACCTGAAACCCCTTCTGGAGAACACCCTTCGGCAAGCGTGGCCCCAATTTGCTC
GCTCGCTGGAGCGGGGCAGCCTGGACATCGACTGGGCCGGCCTTAAGGGCGAAGTGGAGCGGGTGGTGCGCCGTTTCTTG
CGAGAACAATTGCCCGGCAGGCCCACGGTGGCGGTTTTTGTGCAATCCCCTGAAGAGGAGTCTGTGTCTTCTTTGGGTGT
GGAAACCCAACCGGAGCCGGTAGCGGGTGCTCTGGGCCGGCGGCGGCGTTCCTCGGCAGCGGTAGCTGCTTCCTAA

Upstream 100 bases:

>100_bases
TGGGAAATGGATGAGTTGCGGCTTTCGCCCACAACTTTGTCGGGGATAGCTTGTGCCTATTTCTGTTTTTGTTTTTTTAC
TGTTGAGGATCTAAACCCAT

Downstream 100 bases:

>100_bases
AACTGGCCCGTTCTCCGTGGCTGGATCGTCTAAGCGCCTTTGGGATCCCTTGCCGAGCGCAGGGATCCTTCCCATTGTGC
CGGCTTGTATTCATCCGTGA

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MPTPRSSVASRSVIPQSTSSVQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMHGVNIVLPDMTYIKQNRDKVR
GMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEEKLREVGLLNRTELRPVGPREIVPLSKHFFAEFIRNTHSFAD
SFTVALHTPVGVIIQTGDFKIDHTPVDGEYFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKGR
VIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDRVIILTTGSQGEPL
AALTRIANGEHPQLQIKPGDTVVWSANPIPGNTIAVSRVIDKLMELGANVIYGKDKGLHVSGHGCQEDQKLMIALTRPKF
FVPTHGEYRMLVKHAETAMSMGIPRENIVIIDNGDVVEVNRERIAITGRVPSGLQMIAASHDGVVMDEMLQERQQIAKDG
MVTVVISLDGSGQLLCTPQVQTFGLAGEGNQLKGSDLKPLLENTLRQAWPQFARSLERGSLDIDWAGLKGEVERVVRRFL
REQLPGRPTVAVFVQSPEEESVSSLGVETQPEPVAGALGRRRRSSAAVAAS

Sequences:

>Translated_611_residues
MPTPRSSVASRSVIPQSTSSVQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMHGVNIVLPDMTYIKQNRDKVR
GMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEEKLREVGLLNRTELRPVGPREIVPLSKHFFAEFIRNTHSFAD
SFTVALHTPVGVIIQTGDFKIDHTPVDGEYFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKGR
VIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDRVIILTTGSQGEPL
AALTRIANGEHPQLQIKPGDTVVWSANPIPGNTIAVSRVIDKLMELGANVIYGKDKGLHVSGHGCQEDQKLMIALTRPKF
FVPTHGEYRMLVKHAETAMSMGIPRENIVIIDNGDVVEVNRERIAITGRVPSGLQMIAASHDGVVMDEMLQERQQIAKDG
MVTVVISLDGSGQLLCTPQVQTFGLAGEGNQLKGSDLKPLLENTLRQAWPQFARSLERGSLDIDWAGLKGEVERVVRRFL
REQLPGRPTVAVFVQSPEEESVSSLGVETQPEPVAGALGRRRRSSAAVAAS
>Mature_610_residues
PTPRSSVASRSVIPQSTSSVQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMHGVNIVLPDMTYIKQNRDKVRG
MVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEEKLREVGLLNRTELRPVGPREIVPLSKHFFAEFIRNTHSFADS
FTVALHTPVGVIIQTGDFKIDHTPVDGEYFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKGRV
IITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDRVIILTTGSQGEPLA
ALTRIANGEHPQLQIKPGDTVVWSANPIPGNTIAVSRVIDKLMELGANVIYGKDKGLHVSGHGCQEDQKLMIALTRPKFF
VPTHGEYRMLVKHAETAMSMGIPRENIVIIDNGDVVEVNRERIAITGRVPSGLQMIAASHDGVVMDEMLQERQQIAKDGM
VTVVISLDGSGQLLCTPQVQTFGLAGEGNQLKGSDLKPLLENTLRQAWPQFARSLERGSLDIDWAGLKGEVERVVRRFLR
EQLPGRPTVAVFVQSPEEESVSSLGVETQPEPVAGALGRRRRSSAAVAAS

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 66834; Mature: 66703

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00136 SUBTILASE_ASP ; PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPRSSVASRSVIPQSTSSVQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMH
CCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCC
GVNIVLPDMTYIKQNRDKVRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEEK
CCEEEECCHHHHHCCHHHHCEEEEECCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHHHH
LREVGLLNRTELRPVGPREIVPLSKHFFAEFIRNTHSFADSFTVALHTPVGVIIQTGDFK
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCEE
IDHTPVDGEYFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKGR
EECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
VIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVI
EEEEEHHHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH
NSLPDDRVIILTTGSQGEPLAALTRIANGEHPQLQIKPGDTVVWSANPIPGNTIAVSRVI
HCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHH
DKLMELGANVIYGKDKGLHVSGHGCQEDQKLMIALTRPKFFVPTHGEYRMLVKHAETAMS
HHHHHCCCEEEEECCCCEEECCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHH
MGIPRENIVIIDNGDVVEVNRERIAITGRVPSGLQMIAASHDGVVMDEMLQERQQIAKDG
HCCCCCCEEEECCCCEEEECCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
MVTVVISLDGSGQLLCTPQVQTFGLAGEGNQLKGSDLKPLLENTLRQAWPQFARSLERGS
EEEEEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
LDIDWAGLKGEVERVVRRFLREQLPGRPTVAVFVQSPEEESVSSLGVETQPEPVAGALGR
CEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHH
RRRSSAAVAAS
HHCCCCCCCCC
>Mature Secondary Structure 
PTPRSSVASRSVIPQSTSSVQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMH
CCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCC
GVNIVLPDMTYIKQNRDKVRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEEK
CCEEEECCHHHHHCCHHHHCEEEEECCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHHHH
LREVGLLNRTELRPVGPREIVPLSKHFFAEFIRNTHSFADSFTVALHTPVGVIIQTGDFK
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCEE
IDHTPVDGEYFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKGR
EECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
VIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVI
EEEEEHHHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH
NSLPDDRVIILTTGSQGEPLAALTRIANGEHPQLQIKPGDTVVWSANPIPGNTIAVSRVI
HCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHH
DKLMELGANVIYGKDKGLHVSGHGCQEDQKLMIALTRPKFFVPTHGEYRMLVKHAETAMS
HHHHHCCCEEEEECCCCEEECCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHH
MGIPRENIVIIDNGDVVEVNRERIAITGRVPSGLQMIAASHDGVVMDEMLQERQQIAKDG
HCCCCCCEEEECCCCEEEECCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
MVTVVISLDGSGQLLCTPQVQTFGLAGEGNQLKGSDLKPLLENTLRQAWPQFARSLERGS
EEEEEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
LDIDWAGLKGEVERVVRRFLREQLPGRPTVAVFVQSPEEESVSSLGVETQPEPVAGALGR
CEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHH
RRRSSAAVAAS
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]