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The map label for this gene is p49 [H]

Identifier: 86607519

GI number: 86607519

Start: 19691

End: 21247

Strand: Reverse

Name: p49 [H]

Synonym: CYB_0017

Alternate gene names: 86607519

Gene position: 21247-19691 (Counterclockwise)

Preceding gene: 86607520

Following gene: 86607517

Centisome position: 0.7

GC content: 59.02

Gene sequence:

>1557_bases
ATGAGCTACGACGCGGTGGTGATTGGGGCCGGGCATAACGGGCTGGTGAGCGCTTGCTATTTGGCCAAAGCGGGGCAAAA
AGTGATGGTGCTGGAGCGCTATCACACCGTTGGTGGTGCTGCCATTACAGAAGAAATTCACCCGGGCTTTCGCGTGTCGG
TGGCTTCCTATTCCTGTAGTTTGCTGCGACCGGAGATCATTCGCGATTTGCGCCTGCCGGACTATGGCTTTGAGGTCTAT
GCCAAGCAACCTTCCTACTTCATGCCTTTCCCGGATGGGCAGCACCTCTTCCTGTATGCCGATAACCGCGCCAAGAGCAA
AGCGGAAATTGCCAAGTTTTCCCGCAAAGATGCGGAAGCCTACGACCGCTGGGAGGAGTTTTGGGATCGGGTGAACGAGG
TGGTGGAGCCAACCTTAATGCAGCCGCCGATTTCACTGGGCCAACTGGCGGATCGCTTTGCAGCTGCTGGCTATGAAGAC
GATTTCCGCCGCATCATGCTCCTCTCGACCACTGATCTCCTGGATGAATTCTTCGAGTCGGAGCAAGTCAAGGCGGCGAT
GGCTCCTCAATCTTTGATCGGCACCTCTGCCGGGCCGATGACTCCGGGTACGCCCTACATCTGGCTGGTCCATGCGGTAG
GTCGGGCCATTGGCTCGCGTGGGGTCTGGGGCTATGTGCGCGGTGGGATGGGATCCATTACCCAAGCGATGGCCAAGGCA
GCTCTGGACTTAGGGGTGGAGATCCGCACGTCTGCTCCAGTGGCGGAGATCTTGATGGAGAGTGGGCAGGCCACTGGAGT
CGTCCTCGAATCGGGGGAAACCGTGCGGGCGCGGGCGGTTCTCTCCAATGCCCATCCCCAAATCACCTTTTTGCGACTCT
GCTCCTCTTTGCCCCCAGACTTGCGCGACCGACTAGAACGGCACTACCGCACCTCAGGCCCGGTGTACAAGCTCAACTTG
GCCTTGGAAGAATTGCCTCGCTACACAGCAGCCCCTGCTGAAGTGCCCCCAGAAGTTGTCAGTTCCGCCACGGTAGACAT
TGCTCCCTCGGTGGCCTATCTGGAGCGGGCTTGGGATGATTGCAAATACGGGATCCCTTCCCGGGATCCGTTTATCGAGA
TCTACAGCCAATCCCCCACCGACCCGACGATGGCTCCCCCAGGCAAGCACATTCTCTCCTGCTTCTGCCAGTTTGTGCCT
TACCAACCCAAAGGGCGAGACTGGAACGATGGCCTACGGGAGGAATTTGCCGATCGGGTAATCGACAAAATTGCCCAATT
TGCCCCCAACATTAAAAACGCCGTGATCGCACGGCAGATGTTGTCGCCCGTGGATCTGGAGGCCCGCTTCGGCCTTGTGG
GGGGCAGCATTTTTCACGGGGAAATGACGCCGGATCAAAGCTACAACCTGCGGCCCATCTCCGGCCTAGCCGACTATCGA
TCCCCCATCCCCGGCCTTTACCTCTGCGGCTCAGGGGCGCACCCAGGAGGCGGAGTGACCGGGATCCCTGGCCACAACTG
CGCACAGGTGGTGCTCAGCGATCTACCCAAGCTCTGA

Upstream 100 bases:

>100_bases
CAGAATGCTATCGCTTCACCGTTGAGCAGTAATGCTCAGCAGTGTTCAGCGTAAATGTATCAGTATTGTGGGTGGGGAAG
CATTTGCAAAAGGATTGTCG

Downstream 100 bases:

>100_bases
CCGACGAAAAGGCCAAGCCAGAGCGGATCCCTGCTCTGGGATCAGACGGTTTGCCTGGGCTACAGGCGTACCTCAGTTCC
CTCAAAGAACCCACGGATGA

Product: phytoene desaturase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MSYDAVVIGAGHNGLVSACYLAKAGQKVMVLERYHTVGGAAITEEIHPGFRVSVASYSCSLLRPEIIRDLRLPDYGFEVY
AKQPSYFMPFPDGQHLFLYADNRAKSKAEIAKFSRKDAEAYDRWEEFWDRVNEVVEPTLMQPPISLGQLADRFAAAGYED
DFRRIMLLSTTDLLDEFFESEQVKAAMAPQSLIGTSAGPMTPGTPYIWLVHAVGRAIGSRGVWGYVRGGMGSITQAMAKA
ALDLGVEIRTSAPVAEILMESGQATGVVLESGETVRARAVLSNAHPQITFLRLCSSLPPDLRDRLERHYRTSGPVYKLNL
ALEELPRYTAAPAEVPPEVVSSATVDIAPSVAYLERAWDDCKYGIPSRDPFIEIYSQSPTDPTMAPPGKHILSCFCQFVP
YQPKGRDWNDGLREEFADRVIDKIAQFAPNIKNAVIARQMLSPVDLEARFGLVGGSIFHGEMTPDQSYNLRPISGLADYR
SPIPGLYLCGSGAHPGGGVTGIPGHNCAQVVLSDLPKL

Sequences:

>Translated_518_residues
MSYDAVVIGAGHNGLVSACYLAKAGQKVMVLERYHTVGGAAITEEIHPGFRVSVASYSCSLLRPEIIRDLRLPDYGFEVY
AKQPSYFMPFPDGQHLFLYADNRAKSKAEIAKFSRKDAEAYDRWEEFWDRVNEVVEPTLMQPPISLGQLADRFAAAGYED
DFRRIMLLSTTDLLDEFFESEQVKAAMAPQSLIGTSAGPMTPGTPYIWLVHAVGRAIGSRGVWGYVRGGMGSITQAMAKA
ALDLGVEIRTSAPVAEILMESGQATGVVLESGETVRARAVLSNAHPQITFLRLCSSLPPDLRDRLERHYRTSGPVYKLNL
ALEELPRYTAAPAEVPPEVVSSATVDIAPSVAYLERAWDDCKYGIPSRDPFIEIYSQSPTDPTMAPPGKHILSCFCQFVP
YQPKGRDWNDGLREEFADRVIDKIAQFAPNIKNAVIARQMLSPVDLEARFGLVGGSIFHGEMTPDQSYNLRPISGLADYR
SPIPGLYLCGSGAHPGGGVTGIPGHNCAQVVLSDLPKL
>Mature_517_residues
SYDAVVIGAGHNGLVSACYLAKAGQKVMVLERYHTVGGAAITEEIHPGFRVSVASYSCSLLRPEIIRDLRLPDYGFEVYA
KQPSYFMPFPDGQHLFLYADNRAKSKAEIAKFSRKDAEAYDRWEEFWDRVNEVVEPTLMQPPISLGQLADRFAAAGYEDD
FRRIMLLSTTDLLDEFFESEQVKAAMAPQSLIGTSAGPMTPGTPYIWLVHAVGRAIGSRGVWGYVRGGMGSITQAMAKAA
LDLGVEIRTSAPVAEILMESGQATGVVLESGETVRARAVLSNAHPQITFLRLCSSLPPDLRDRLERHYRTSGPVYKLNLA
LEELPRYTAAPAEVPPEVVSSATVDIAPSVAYLERAWDDCKYGIPSRDPFIEIYSQSPTDPTMAPPGKHILSCFCQFVPY
QPKGRDWNDGLREEFADRVIDKIAQFAPNIKNAVIARQMLSPVDLEARFGLVGGSIFHGEMTPDQSYNLRPISGLADYRS
PIPGLYLCGSGAHPGGGVTGIPGHNCAQVVLSDLPKL

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=549, Percent_Identity=41.1657559198543, Blast_Score=399, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17540238, Length=524, Percent_Identity=40.4580152671756, Blast_Score=382, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56703; Mature: 56572

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYDAVVIGAGHNGLVSACYLAKAGQKVMVLERYHTVGGAAITEEIHPGFRVSVASYSCS
CCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHCCCCEEEEEECCCHH
LLRPEIIRDLRLPDYGFEVYAKQPSYFMPFPDGQHLFLYADNRAKSKAEIAKFSRKDAEA
HHCHHHHHHCCCCCCCCEEEECCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
YDRWEEFWDRVNEVVEPTLMQPPISLGQLADRFAAAGYEDDFRRIMLLSTTDLLDEFFES
HHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCHHHHEEEEHHHHHHHHHHHHH
EQVKAAMAPQSLIGTSAGPMTPGTPYIWLVHAVGRAIGSRGVWGYVRGGMGSITQAMAKA
HHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHH
ALDLGVEIRTSAPVAEILMESGQATGVVLESGETVRARAVLSNAHPQITFLRLCSSLPPD
HHHCCEEEECCCCHHHHHHHCCCCCEEEEECCCCEEHHHHHHCCCCCHHHHHHHHCCCHH
LRDRLERHYRTSGPVYKLNLALEELPRYTAAPAEVPPEVVSSATVDIAPSVAYLERAWDD
HHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH
CKYGIPSRDPFIEIYSQSPTDPTMAPPGKHILSCFCQFVPYQPKGRDWNDGLREEFADRV
HCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
IDKIAQFAPNIKNAVIARQMLSPVDLEARFGLVGGSIFHGEMTPDQSYNLRPISGLADYR
HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHEEECCEEEECCCCCCCCCCCCCCCCHHHHC
SPIPGLYLCGSGAHPGGGVTGIPGHNCAQVVLSDLPKL
CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SYDAVVIGAGHNGLVSACYLAKAGQKVMVLERYHTVGGAAITEEIHPGFRVSVASYSCS
CCCEEEEECCCCHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHCCCCEEEEEECCCHH
LLRPEIIRDLRLPDYGFEVYAKQPSYFMPFPDGQHLFLYADNRAKSKAEIAKFSRKDAEA
HHCHHHHHHCCCCCCCCEEEECCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
YDRWEEFWDRVNEVVEPTLMQPPISLGQLADRFAAAGYEDDFRRIMLLSTTDLLDEFFES
HHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCHHHHEEEEHHHHHHHHHHHHH
EQVKAAMAPQSLIGTSAGPMTPGTPYIWLVHAVGRAIGSRGVWGYVRGGMGSITQAMAKA
HHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHH
ALDLGVEIRTSAPVAEILMESGQATGVVLESGETVRARAVLSNAHPQITFLRLCSSLPPD
HHHCCEEEECCCCHHHHHHHCCCCCEEEEECCCCEEHHHHHHCCCCCHHHHHHHHCCCHH
LRDRLERHYRTSGPVYKLNLALEELPRYTAAPAEVPPEVVSSATVDIAPSVAYLERAWDD
HHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH
CKYGIPSRDPFIEIYSQSPTDPTMAPPGKHILSCFCQFVPYQPKGRDWNDGLREEFADRV
HCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
IDKIAQFAPNIKNAVIARQMLSPVDLEARFGLVGGSIFHGEMTPDQSYNLRPISGLADYR
HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHEEECCEEEECCCCCCCCCCCCCCCCHHHHC
SPIPGLYLCGSGAHPGGGVTGIPGHNCAQVVLSDLPKL
CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]