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The map label for this gene is ydcM [C]

Identifier: 86607520

GI number: 86607520

Start: 21294

End: 22574

Strand: Reverse

Name: ydcM [C]

Synonym: CYB_0018

Alternate gene names: 86607520

Gene position: 22574-21294 (Counterclockwise)

Preceding gene: 86607521

Following gene: 86607519

Centisome position: 0.74

GC content: 54.02

Gene sequence:

>1281_bases
ATGACGATCACTTTTCTCCCCAACAGGAACTGGTTGAGGATATCCTCGCCATCCTGCACTGCTTCAGCAATCGGCTCTAC
GGACTCAGAAAATATCGGGCTGCAATCGAGAAAGATACGGATTTATCCGGAGCCAGCGCTGGCTAAAGTTTGGAAGCGGT
GGCAAGCGGCGTGCCGGTACTGCTACAACCAAGCGATTGCCTATCAGCGTCAGCATGGCACTACTAAAACCCCAGAAAAG
CTGCGGAATATTATCCTGCAATCGGACTTGCCGCAGTGGGTGAAGGAAGCCCCCTGCCACATTAAGCAGAACGCCGTCAT
GGAGGCATGGCAAGCGTTTCGCCAAAGCAAGGAAGCTCGGTTTCGCAGTGTGAGGGATAAGACCCACACCTTGCAGTTCA
ACAACAGTAATTTCAGTCAGGGCAGGTGGTATCCGAAGCTCACGAAGGGTTTGTCGTTTACGGCGTCAGAAGCGGTGCCG
CAAAAGTGTGCCTATGGGACTAAGCTAATGCGGGTGAAAGATAGATGGTATGCCATCTTCCCCGAGCCCGTGAACGAGCA
GTGTTCGTTAGCAAGGGGGGTGATCGCACTTGATCCTGGAGTAAGAAGCTTCCTTACAGGGTTTGATGGGGCGGGCTTTG
TAGATATCGCCAAGGGAGACTTTGGCAGAATCGTTCGGCTGTGCTACCACCTAGACGATCTGCAGTCTAGGCTGAGTAAA
GCACCGAGACCCAAGCGTAGGCGAATGCGGCAAGCGGCATTTCGTCTGCGGGAGAGAATCAGGAACTTGGTGGACGAGTG
CCATCGCAAGGTAGCGGCGTTCCTAACGGATAACTACCGATTGATATTCCTCCCCACTTTCGAGTCAGCCAAGATGGTTG
CCAAGGCGGGGAGGAAGTTTGGTAGCAAGACGGCGGGGGCGATGCTCACCTGGGCGCACTATCGGTTCAAGCAGTTCCTG
AAGTTCCAAGCCAAAAAGAAAAACGTGGTCGTCGTGGAAGTATCGGAGGCGTACACCAGTAAAACCTGTACTAAGTGCGG
GCACATCCACACCAAGTTGGGTGGCGCAAAGGTGTTTAGATGCCCAAAGTGCAACCATAGGCTACCACGAGATTGGCAAG
GCGCTCTGGGTGTTATGCTCAGAGCTTTGCGGGATACCGCCTTTCTGTTCGGACTCCGTCCCGCTGACGCGGTCGCGTTA
GCGTCGCGTAGCGACAACGGAAACGGGCAGAATGCTATCGCTTCACCGTTGAGCAGTAATGCTCAGCAGTGTTCAGCGTA
A

Upstream 100 bases:

>100_bases
GGAACAATTGTGGTCGCTCACCGGGATCGACTCTGCCGGTTTGGATTTGAGTTCGTTGAGTGGTACTGCCGCCAATACGG
GTGCGAAATCTTGGTTCTCG

Downstream 100 bases:

>100_bases
ATGTATCAGTATTGTGGGTGGGGAAGCATTTGCAAAAGGATTGTCGATGAGCTACGACGCGGTGGTGATTGGGGCCGGGC
ATAACGGGCTGGTGAGCGCT

Product: ISSoc2, transposase

Products: NA

Alternate protein names: ISSoc2 Transposase

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTITFLPNRNWLRISSPSCTASAIGSTDSENIGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGTTKTPEK
LRNIILQSDLPQWVKEAPCHIKQNAVMEAWQAFRQSKEARFRSVRDKTHTLQFNNSNFSQGRWYPKLTKGLSFTASEAVP
QKCAYGTKLMRVKDRWYAIFPEPVNEQCSLARGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
APRPKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTAGAMLTWAHYRFKQFL
KFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPADAVAL
ASRSDNGNGQNAIASPLSSNAQQCSA

Sequences:

>Translated_426_residues
MTITFLPNRNWLRISSPSCTASAIGSTDSENIGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGTTKTPEK
LRNIILQSDLPQWVKEAPCHIKQNAVMEAWQAFRQSKEARFRSVRDKTHTLQFNNSNFSQGRWYPKLTKGLSFTASEAVP
QKCAYGTKLMRVKDRWYAIFPEPVNEQCSLARGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
APRPKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTAGAMLTWAHYRFKQFL
KFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPADAVAL
ASRSDNGNGQNAIASPLSSNAQQCSA
>Mature_425_residues
TITFLPNRNWLRISSPSCTASAIGSTDSENIGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGTTKTPEKL
RNIILQSDLPQWVKEAPCHIKQNAVMEAWQAFRQSKEARFRSVRDKTHTLQFNNSNFSQGRWYPKLTKGLSFTASEAVPQ
KCAYGTKLMRVKDRWYAIFPEPVNEQCSLARGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKA
PRPKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTAGAMLTWAHYRFKQFLK
FQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPADAVALA
SRSDNGNGQNAIASPLSSNAQQCSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48303; Mature: 48172

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITFLPNRNWLRISSPSCTASAIGSTDSENIGLQSRKIRIYPEPALAKVWKRWQAACRY
CEEEEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
CYNQAIAYQRQHGTTKTPEKLRNIILQSDLPQWVKEAPCHIKQNAVMEAWQAFRQSKEAR
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FRSVRDKTHTLQFNNSNFSQGRWYPKLTKGLSFTASEAVPQKCAYGTKLMRVKDRWYAIF
HHHHHCHHEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCHHHEEEECCEEEEC
PEPVNEQCSLARGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
CCCCCCHHHHHCCEEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
APRPKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHC
GSKTAGAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHCCCCEEEE
CPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPADAVALASRSDNGNGQNAIASPLSSN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHEEECCCCCCCCCHHHHCCHHCC
AQQCSA
HHHCCC
>Mature Secondary Structure 
TITFLPNRNWLRISSPSCTASAIGSTDSENIGLQSRKIRIYPEPALAKVWKRWQAACRY
EEEEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
CYNQAIAYQRQHGTTKTPEKLRNIILQSDLPQWVKEAPCHIKQNAVMEAWQAFRQSKEAR
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FRSVRDKTHTLQFNNSNFSQGRWYPKLTKGLSFTASEAVPQKCAYGTKLMRVKDRWYAIF
HHHHHCHHEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCHHHEEEECCEEEEC
PEPVNEQCSLARGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
CCCCCCHHHHHCCEEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
APRPKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHC
GSKTAGAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHCCCCEEEE
CPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPADAVALASRSDNGNGQNAIASPLSSN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHEEECCCCCCCCCHHHHCCHHCC
AQQCSA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA