Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86607514
Identifier: 86607514
GI number: 86607514
Start: 14052
End: 14774
Strand: Reverse
Name: 86607514
Synonym: CYB_0012
Alternate gene names: NA
Gene position: 14774-14052 (Counterclockwise)
Preceding gene: 86607516
Following gene: 86607513
Centisome position: 0.48
GC content: 51.45
Gene sequence:
>723_bases ATGTTCAGCCTACTCCTTCTGCTGACCTTGATTGGGGTGATCTTCTTCACCCGGCGGCTACAGCAACTCCTGCACAACAT TCCGCAGCGCTACTGGCTCTCTCTGGGTGGAGGGATTTCTCTGGCCTATGTGTTCACGGCTTTTTTGGCGGAAGTGACGG AGCTGCAACAACACTTGATGCCCCTAGAAGTGCCTGTGTTGGGCTATTTGATTGAACACATTCATCTGCTCATGTTGCTG GGCATTGTTACGGTATATGGGTTGGAGGGGCTGGCCCAATCTTCCAAGCAAGAGGCATTGCTGCATCCAAGGATATTTTC CGTTCACATTGGTTTCTTTACGCTCTACAGCGTAATTCTGGGTTATTTGCTAAGACACACGGTGCAAGAATGGCTCAGTT GCCTGTTGCTGACCATCGCTTTGGCTATCCACCTCAGCATCGTCTGTAAAGATCTATTTGAGCATCATCCCCACTTATTT CAGCACCAAGGGCGTTGGCTGTTGATCGGATCCCTTTTTGTCGGTTGGCTGATGGGGCAAAGGGCCATTTTGCCGGAGAT AGCCTTAGCCGCCAGCATTGCCTTTGTAGCGGGGGTTTTAATCTTTCAAGTGCTGAAGCACGAGCTACCCGAAACCGAAG GGCACTTTGGGGCATTTTTGGCGGGTGTTGTCGGTTTTGGTAGCTTGCTGGTGGCCATTTCGGCCATTCGGGCCTGGGAG TGA
Upstream 100 bases:
>100_bases GGTTCATCAATCCAGCTCCCAGCCTGACGGCCCAAGGTATCTGCGAGGGAGTTCCTCCGCGTATTTACGTGGGTACAGTT CTGCAAGTTGTGGTGCCAAG
Downstream 100 bases:
>100_bases GTTCTACGGGTAAACCCAGCGTATCAGTAGCAATCACTGGGATCCCTCTCTGAAATTCTGCGGATTTTGAGTGGAGATTA CCTTTTCTGAATCTTCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLMPLEVPVLGYLIEHIHLLMLL GIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVILGYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLF QHQGRWLLIGSLFVGWLMGQRAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE
Sequences:
>Translated_240_residues MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLMPLEVPVLGYLIEHIHLLMLL GIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVILGYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLF QHQGRWLLIGSLFVGWLMGQRAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE >Mature_240_residues MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLMPLEVPVLGYLIEHIHLLMLL GIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVILGYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLF QHQGRWLLIGSLFVGWLMGQRAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26862; Mature: 26862
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC PLEVPVLGYLIEHIHLLMLLGIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLFQHQGRWLLIGSLFVGWLMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEHHHHHHHHHHHCC RAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC PLEVPVLGYLIEHIHLLMLLGIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLFQHQGRWLLIGSLFVGWLMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEHHHHHHHHHHHCC RAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA