Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86607516
Identifier: 86607516
GI number: 86607516
Start: 16445
End: 16555
Strand: Reverse
Name: 86607516
Synonym: CYB_0013
Alternate gene names: NA
Gene position: 16555-16445 (Counterclockwise)
Preceding gene: 86607517
Following gene: 86607514
Centisome position: 0.54
GC content: 52.25
Gene sequence:
>111_bases TTGGGGGGAGAGGCCAACCCTGTAGGCTGCCGCAGTTTGGCAGCCTCTCAGTCTCTGCACTCAAGAGTCAAAGGGATCCA GCTTTGCGCAAAAGATTATCTGGGATATTAA
Upstream 100 bases:
>100_bases TTTTACACCGTAACTTTTAAGTAGAGTTCTTACCCTTGACCCAAGTAAAAGTGAGGCAGATGGGTCAAGCTGTGAGCATT CCTATGCTGCTCAGCAGAGC
Downstream 100 bases:
>100_bases GCTGTTGTGCTGTTCAAGCCGGCTGCCCAATCCAGCAGGCGATTCACTTCTTCCGGGGTTTTGGCTTCCGAGTACAGCCG CAGCAAAGGCTCGGTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 35
Protein sequence:
>36_residues MGGEANPVGCRSLAASQSLHSRVKGIQLCAKDYLGY
Sequences:
>Translated_36_residues MGGEANPVGCRSLAASQSLHSRVKGIQLCAKDYLGY >Mature_35_residues GGEANPVGCRSLAASQSLHSRVKGIQLCAKDYLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3781; Mature: 3650
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGEANPVGCRSLAASQSLHSRVKGIQLCAKDYLGY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GGEANPVGCRSLAASQSLHSRVKGIQLCAKDYLGY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA