Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is ptxB [H]
Identifier: 86607513
GI number: 86607513
Start: 12864
End: 13868
Strand: Reverse
Name: ptxB [H]
Synonym: CYB_0011
Alternate gene names: 86607513
Gene position: 13868-12864 (Counterclockwise)
Preceding gene: 86607514
Following gene: 86607512
Centisome position: 0.46
GC content: 54.03
Gene sequence:
>1005_bases ATGATGAAAACTTTCTTGGCAGGCCGTCGCTCTTTGCTCGTGGGGCTAGTTGCCACCGTGGCCGGTGCTTCTGTAGCCCT GTCTGGACTGGTGCATGCCCAGGCCAAAGATTGCCCCCGTCCGCCGGAGATGGATGTGCGCTTCTGCGACCGCGATGGCG ATTTGATTGCCGATGTGCCGGAAGATCCGAACGAGTGGATCAATCCGGATACCCTGATCTTTGCCTACACCCCCGTTGAG GATCCCTCAGTTTACAAGAACGTTTGGGCTGAGTTTCTCGATCACTTGGCAGAGTTAACCGGCAAGAAGGTGGAATACTT CCCAGTGCAGTCCAATGCTGCTCAGTTGGAAGCGATGCGGGCGGGCCGTCTGCATGTGACCGGCTTTAACACCGGCTCTG TCCCTTTGGCGGTGAATGCGGTGGGCTTCCGTCCTTTTGCTATGATGGCCAGCTTGGATGGCAGCTTCGGCTACGAAATG GAGATCATCGTTCCTGCCGATAGCGATATCCAATCCATCGAAGATCTGCGCGGTCGGCAATTGGCTTTCACTAGCGAAAC CTCCAACTCTGGCTTTAAGGCTCCTTCGGCGCTGCTGAAAGGGGAATTTGGCATGGAGCCCGGGGTTGACTACCAAACTG TCTTCTCAGGCAACCACGAGAACTCTATCTTGGGTGTGTTTAACGGTGACTACGAGGCGGCGGCTATTGCCAACTCCGTG ATGACCCGCATGGCCAAGCGGGGCACGATTGATCCCAGCAAAATTCGCACCATCTACAAATCTCAAACTTTCCCCACCAC AGCCTATGGAGTTGTCTACAACCTCCACCCAGAAGTGGCGGAAAAAGTGAAAGAGGCTTTCTTCACCTTTAAGTGGGAAG GCACCAAGCTAGCGGAAGAGTTTGGCAAGAGTGGTGGGGAGCAGTTCATTACCATCACTTACAAAGAGTATTGGGAAGTG ATCCGCACTATTGATAAAGCCAGCGGCGTGGAGTACAAGCTCTAA
Upstream 100 bases:
>100_bases TTTCTGAATCTTCGCTTAACAAAAAGTTAACTCTAGCCTGCTATTTTCTATCTGTTCCTTGAAGAAACACTGAGCCCTCA TTGAGGAGTCAATAGACACT
Downstream 100 bases:
>100_bases ATCCTCTCCAGCAGATCTTTCACTTATGGGATCCCTTCTCGATCGGGGATCCCTTTTTGTTGTCCTGCGACAGTCAGGAT CGAGCCGGACAGTATCATCG
Product: phosphonate ABC transporter, phosphonate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MMKTFLAGRRSLLVGLVATVAGASVALSGLVHAQAKDCPRPPEMDVRFCDRDGDLIADVPEDPNEWINPDTLIFAYTPVE DPSVYKNVWAEFLDHLAELTGKKVEYFPVQSNAAQLEAMRAGRLHVTGFNTGSVPLAVNAVGFRPFAMMASLDGSFGYEM EIIVPADSDIQSIEDLRGRQLAFTSETSNSGFKAPSALLKGEFGMEPGVDYQTVFSGNHENSILGVFNGDYEAAAIANSV MTRMAKRGTIDPSKIRTIYKSQTFPTTAYGVVYNLHPEVAEKVKEAFFTFKWEGTKLAEEFGKSGGEQFITITYKEYWEV IRTIDKASGVEYKL
Sequences:
>Translated_334_residues MMKTFLAGRRSLLVGLVATVAGASVALSGLVHAQAKDCPRPPEMDVRFCDRDGDLIADVPEDPNEWINPDTLIFAYTPVE DPSVYKNVWAEFLDHLAELTGKKVEYFPVQSNAAQLEAMRAGRLHVTGFNTGSVPLAVNAVGFRPFAMMASLDGSFGYEM EIIVPADSDIQSIEDLRGRQLAFTSETSNSGFKAPSALLKGEFGMEPGVDYQTVFSGNHENSILGVFNGDYEAAAIANSV MTRMAKRGTIDPSKIRTIYKSQTFPTTAYGVVYNLHPEVAEKVKEAFFTFKWEGTKLAEEFGKSGGEQFITITYKEYWEV IRTIDKASGVEYKL >Mature_334_residues MMKTFLAGRRSLLVGLVATVAGASVALSGLVHAQAKDCPRPPEMDVRFCDRDGDLIADVPEDPNEWINPDTLIFAYTPVE DPSVYKNVWAEFLDHLAELTGKKVEYFPVQSNAAQLEAMRAGRLHVTGFNTGSVPLAVNAVGFRPFAMMASLDGSFGYEM EIIVPADSDIQSIEDLRGRQLAFTSETSNSGFKAPSALLKGEFGMEPGVDYQTVFSGNHENSILGVFNGDYEAAAIANSV MTRMAKRGTIDPSKIRTIYKSQTFPTTAYGVVYNLHPEVAEKVKEAFFTFKWEGTKLAEEFGKSGGEQFITITYKEYWEV IRTIDKASGVEYKL
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 36764; Mature: 36764
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTFLAGRRSLLVGLVATVAGASVALSGLVHAQAKDCPRPPEMDVRFCDRDGDLIADVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECC EDPNEWINPDTLIFAYTPVEDPSVYKNVWAEFLDHLAELTGKKVEYFPVQSNAAQLEAMR CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH AGRLHVTGFNTGSVPLAVNAVGFRPFAMMASLDGSFGYEMEIIVPADSDIQSIEDLRGRQ CCEEEEEECCCCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCE LAFTSETSNSGFKAPSALLKGEFGMEPGVDYQTVFSGNHENSILGVFNGDYEAAAIANSV EEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHH MTRMAKRGTIDPSKIRTIYKSQTFPTTAYGVVYNLHPEVAEKVKEAFFTFKWEGTKLAEE HHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHEEEEECCCHHHHH FGKSGGEQFITITYKEYWEVIRTIDKASGVEYKL HCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMKTFLAGRRSLLVGLVATVAGASVALSGLVHAQAKDCPRPPEMDVRFCDRDGDLIADVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECC EDPNEWINPDTLIFAYTPVEDPSVYKNVWAEFLDHLAELTGKKVEYFPVQSNAAQLEAMR CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH AGRLHVTGFNTGSVPLAVNAVGFRPFAMMASLDGSFGYEMEIIVPADSDIQSIEDLRGRQ CCEEEEEECCCCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCE LAFTSETSNSGFKAPSALLKGEFGMEPGVDYQTVFSGNHENSILGVFNGDYEAAAIANSV EEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHH MTRMAKRGTIDPSKIRTIYKSQTFPTTAYGVVYNLHPEVAEKVKEAFFTFKWEGTKLAEE HHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHEEEEECCCHHHHH FGKSGGEQFITITYKEYWEVIRTIDKASGVEYKL HCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]