Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607514

Identifier: 86607514

GI number: 86607514

Start: 14052

End: 14774

Strand: Reverse

Name: 86607514

Synonym: CYB_0012

Alternate gene names: NA

Gene position: 14774-14052 (Counterclockwise)

Preceding gene: 86607516

Following gene: 86607513

Centisome position: 0.48

GC content: 51.45

Gene sequence:

>723_bases
ATGTTCAGCCTACTCCTTCTGCTGACCTTGATTGGGGTGATCTTCTTCACCCGGCGGCTACAGCAACTCCTGCACAACAT
TCCGCAGCGCTACTGGCTCTCTCTGGGTGGAGGGATTTCTCTGGCCTATGTGTTCACGGCTTTTTTGGCGGAAGTGACGG
AGCTGCAACAACACTTGATGCCCCTAGAAGTGCCTGTGTTGGGCTATTTGATTGAACACATTCATCTGCTCATGTTGCTG
GGCATTGTTACGGTATATGGGTTGGAGGGGCTGGCCCAATCTTCCAAGCAAGAGGCATTGCTGCATCCAAGGATATTTTC
CGTTCACATTGGTTTCTTTACGCTCTACAGCGTAATTCTGGGTTATTTGCTAAGACACACGGTGCAAGAATGGCTCAGTT
GCCTGTTGCTGACCATCGCTTTGGCTATCCACCTCAGCATCGTCTGTAAAGATCTATTTGAGCATCATCCCCACTTATTT
CAGCACCAAGGGCGTTGGCTGTTGATCGGATCCCTTTTTGTCGGTTGGCTGATGGGGCAAAGGGCCATTTTGCCGGAGAT
AGCCTTAGCCGCCAGCATTGCCTTTGTAGCGGGGGTTTTAATCTTTCAAGTGCTGAAGCACGAGCTACCCGAAACCGAAG
GGCACTTTGGGGCATTTTTGGCGGGTGTTGTCGGTTTTGGTAGCTTGCTGGTGGCCATTTCGGCCATTCGGGCCTGGGAG
TGA

Upstream 100 bases:

>100_bases
GGTTCATCAATCCAGCTCCCAGCCTGACGGCCCAAGGTATCTGCGAGGGAGTTCCTCCGCGTATTTACGTGGGTACAGTT
CTGCAAGTTGTGGTGCCAAG

Downstream 100 bases:

>100_bases
GTTCTACGGGTAAACCCAGCGTATCAGTAGCAATCACTGGGATCCCTCTCTGAAATTCTGCGGATTTTGAGTGGAGATTA
CCTTTTCTGAATCTTCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLMPLEVPVLGYLIEHIHLLMLL
GIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVILGYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLF
QHQGRWLLIGSLFVGWLMGQRAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE

Sequences:

>Translated_240_residues
MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLMPLEVPVLGYLIEHIHLLMLL
GIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVILGYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLF
QHQGRWLLIGSLFVGWLMGQRAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE
>Mature_240_residues
MFSLLLLLTLIGVIFFTRRLQQLLHNIPQRYWLSLGGGISLAYVFTAFLAEVTELQQHLMPLEVPVLGYLIEHIHLLMLL
GIVTVYGLEGLAQSSKQEALLHPRIFSVHIGFFTLYSVILGYLLRHTVQEWLSCLLLTIALAIHLSIVCKDLFEHHPHLF
QHQGRWLLIGSLFVGWLMGQRAILPEIALAASIAFVAGVLIFQVLKHELPETEGHFGAFLAGVVGFGSLLVAISAIRAWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26862; Mature: 26862

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA