Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is corAf
Identifier: 86361011
GI number: 86361011
Start: 310298
End: 311257
Strand: Reverse
Name: corAf
Synonym: RHE_PF00281
Alternate gene names: 86361011
Gene position: 311257-310298 (Counterclockwise)
Preceding gene: 86361012
Following gene: 86361007
Centisome position: 48.44
GC content: 60.83
Gene sequence:
>960_bases GTGGCCGCAGCCGTCTACGAGCATGGGCAACGTATTCGCGACATCAGGATAGAGGAAGCCGGCGAGTGGCGAAACCGCGA GAATGCCATCGTCTGGATCGGCCTGCATGAGCCGGATGAAGTGCTGCTGCACCAGATCCAGGCCGAGTTCAATCTCCATC CGCTGGCGATCGAGGATGCGGCGCAGCCCCACCAGCGCCCGAAGCTGGAAATTTACGGGGAGGCGATGTTCATCGTCGCC CGCACCGCCCATATGAAGGACGGCGAAATCGTCTTCGGCGAAACGCATCTCTTCGTCGGCCGCGGTTACGTCGTCTCCGT TCGCCACGGCGAATCCTCCTCTTATCTCGCGGTCAGGCAGCGGTGCGAGGCGACGCCCGCCGCCCTTGCCCATGGCGAGA ACTACATCCTCTATTCCATTCTCGATTTCATCGTCGACAACTACATGCCTGTCATCGAGGTGGTGCAGGAAGAGGTCGAG AAGCTCGAAGACCTCGTGCTGCGCGAACAGCTGTCGAAGTCCGATATCGAGCGGCTCTACCTGCTGCGGCGAAAGCTCCT GCGCCTGCGCAACGCTGTGGTGCCGCTCGTCGACGTCTGCCGGCGATACGAGCATATCGATCTTCCCGGCATGGATCCGA CGCTGCAATCGCTGTTTCGCGATGTGACTGATCACGTGCGCCGGGTTCAGGAAGATATCGATGCATTGCGCGAGGTGCTC GCCTTCGCCTTCGAGGCCAGCGTCATGATCGGCCAGACGGAACAGACGGCGATCGCCCGCAAGCTCGCCGCCTGGGCGGC GATCCTCGCTGTTCCCACCGCCATCGCCGGCATCTACGGCATGAATTTCAGCGATATGCCGGAATTGAAGTTCCAGTATG GCTATTTCGTCGTATTGGGCGTCATCGCCGTCCTGTGCCTCAGCCTTTTCGGCTTCTTCCGCCGGCGAAAATGGCTTTAG
Upstream 100 bases:
>100_bases GGGAGGACGGCAGGATTTGGAAAGGCTGAAGGATCTGGACAGAGTTTCCGCGCGGGCCGGCAGCGAGCCGGCGTCGCCTC CTTATGAGCGGCGCGGCGTC
Downstream 100 bases:
>100_bases TCAGGACAGCGCTTTCAGCAGCCGATCTCGGTGTATGCCGATATAGCCGATGTCGTTCAGATACAGCCTGGCGTCTCCCG CGTCGACGTCTTCCGCGAAG
Product: magnesium/cobalt transporter protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAAAVYEHGQRIRDIRIEEAGEWRNRENAIVWIGLHEPDEVLLHQIQAEFNLHPLAIEDAAQPHQRPKLEIYGEAMFIVA RTAHMKDGEIVFGETHLFVGRGYVVSVRHGESSSYLAVRQRCEATPAALAHGENYILYSILDFIVDNYMPVIEVVQEEVE KLEDLVLREQLSKSDIERLYLLRRKLLRLRNAVVPLVDVCRRYEHIDLPGMDPTLQSLFRDVTDHVRRVQEDIDALREVL AFAFEASVMIGQTEQTAIARKLAAWAAILAVPTAIAGIYGMNFSDMPELKFQYGYFVVLGVIAVLCLSLFGFFRRRKWL
Sequences:
>Translated_319_residues MAAAVYEHGQRIRDIRIEEAGEWRNRENAIVWIGLHEPDEVLLHQIQAEFNLHPLAIEDAAQPHQRPKLEIYGEAMFIVA RTAHMKDGEIVFGETHLFVGRGYVVSVRHGESSSYLAVRQRCEATPAALAHGENYILYSILDFIVDNYMPVIEVVQEEVE KLEDLVLREQLSKSDIERLYLLRRKLLRLRNAVVPLVDVCRRYEHIDLPGMDPTLQSLFRDVTDHVRRVQEDIDALREVL AFAFEASVMIGQTEQTAIARKLAAWAAILAVPTAIAGIYGMNFSDMPELKFQYGYFVVLGVIAVLCLSLFGFFRRRKWL >Mature_318_residues AAAVYEHGQRIRDIRIEEAGEWRNRENAIVWIGLHEPDEVLLHQIQAEFNLHPLAIEDAAQPHQRPKLEIYGEAMFIVAR TAHMKDGEIVFGETHLFVGRGYVVSVRHGESSSYLAVRQRCEATPAALAHGENYILYSILDFIVDNYMPVIEVVQEEVEK LEDLVLREQLSKSDIERLYLLRRKLLRLRNAVVPLVDVCRRYEHIDLPGMDPTLQSLFRDVTDHVRRVQEDIDALREVLA FAFEASVMIGQTEQTAIARKLAAWAAILAVPTAIAGIYGMNFSDMPELKFQYGYFVVLGVIAVLCLSLFGFFRRRKWL
Specific function: Unknown
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=284, Percent_Identity=25.3521126760563, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI2367297, Length=340, Percent_Identity=24.4117647058824, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36559; Mature: 36428
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAVYEHGQRIRDIRIEEAGEWRNRENAIVWIGLHEPDEVLLHQIQAEFNLHPLAIEDA CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCC AQPHQRPKLEIYGEAMFIVARTAHMKDGEIVFGETHLFVGRGYVVSVRHGESSSYLAVRQ CCCCCCCCEEEECCEEEEEEECCCCCCCCEEEECEEEEEECCEEEEEEECCCCCHHHHHH RCEATPAALAHGENYILYSILDFIVDNYMPVIEVVQEEVEKLEDLVLREQLSKSDIERLY HHCCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRRKLLRLRNAVVPLVDVCRRYEHIDLPGMDPTLQSLFRDVTDHVRRVQEDIDALREVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAFEASVMIGQTEQTAIARKLAAWAAILAVPTAIAGIYGMNFSDMPELKFQYGYFVVLG HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH VIAVLCLSLFGFFRRRKWL HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAAVYEHGQRIRDIRIEEAGEWRNRENAIVWIGLHEPDEVLLHQIQAEFNLHPLAIEDA CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCC AQPHQRPKLEIYGEAMFIVARTAHMKDGEIVFGETHLFVGRGYVVSVRHGESSSYLAVRQ CCCCCCCCEEEECCEEEEEEECCCCCCCCEEEECEEEEEECCEEEEEEECCCCCHHHHHH RCEATPAALAHGENYILYSILDFIVDNYMPVIEVVQEEVEKLEDLVLREQLSKSDIERLY HHCCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRRKLLRLRNAVVPLVDVCRRYEHIDLPGMDPTLQSLFRDVTDHVRRVQEDIDALREVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAFEASVMIGQTEQTAIARKLAAWAAILAVPTAIAGIYGMNFSDMPELKFQYGYFVVLG HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH VIAVLCLSLFGFFRRRKWL HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]