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The map label for this gene is ocdf

Identifier: 86360912

GI number: 86360912

Start: 191959

End: 192951

Strand: Reverse

Name: ocdf

Synonym: RHE_PF00181

Alternate gene names: 86360912

Gene position: 192951-191959 (Counterclockwise)

Preceding gene: 86360913

Following gene: 86360911

Centisome position: 30.03

GC content: 65.06

Gene sequence:

>993_bases
ATGAACCGCATGATCATTCTGACGGAAGCGGAATTGCGAGTGATTGTCGGGCTTGATCCCGACGCGGTCGCTTGCGTCGA
GCAGGCCTTCGCCGCGCTTGCAACGAAGGCGGTCGCCATGCCGCCGATCCTGCGGCTCGACATTCCCGAGTATCGGGGCG
AGGTCGATGTGAAGACCGCCTACATCCCCGGCATCGAGGGTTTCGCGATCAAGATCAGCCCCGGCTTCTTCGACAATCCA
AGAATCGGTCTGCCGAGCACCAATGGCATGATGGTGCTGCTATCGAGCCGGACCGGCCTGGTGCAGGCGCTGCTTCTCGA
CAACGGCTATCTCACCGACGTGCGCACCGCCGCGGCCGGTGCCGTCGCGGCAAAACATCTGTCGCGACAAAATTCCAACG
TGGCGGCAATCTTCGGCGCCGGCATGCAGGCGCGGCTGCAGCTTGAAGCGTTGACGCTGGTGCGGCCGATCCGTGAAGCC
AGGATTTGGGCGCGGGATACGGCCAAGGCTAAGGGCGTTGCTGCGGAACTGGCGGCAAGGCTCGGCTTTCCCGTCAAGGC
GAAATCTGACCCGCGGCAAGCAATGTCCGGCGCCGACATCGTCGTGACCACCACGCCAGCGGAAAAACCGATCATCGATG
CCGGCTGGCTCGAACCCGGGCAGCATCTGACGGCCATGGGCTCGGACGCCGAGCACAAGAACGAGATCGATCCGGCGGCC
ATCGCCGGCGCCGGCCTCTATGTCCCCGACAGCCTGAAGCAGACGCGCCGGCTCGGCGAGCTGCACCATGCGATCGAAGC
CGGCCTCGTCGAAAGGGATGCCGATTTCGCCGAACTCGGCCGGATCGTCGCTGGGCGGATGCCGGGCAGGACGGGCGACG
ACCAGATCACCATCGCCGACCTCACCGGAACCGGCATTCAGGACACCGCCATCGCCACGCTCGCCTTTGCCCGCGCCGGC
GCGGCGAATGCCGGCACAACATTCGAAAGCTGA

Upstream 100 bases:

>100_bases
GCGGCCCGATCGTTGCGATCCTTTCCGGGCGGAATGTCGACATGGAACAGCACCGCCGGGTGATCAACGGCGAGGGTGCG
GCATTCACGGAGGATGGCCC

Downstream 100 bases:

>100_bases
CCGGCGCGGCGCCGGAGAAGAAGGGAAGAGACATGACCCAACCCCATCTGAAGTTCTCGCTCGGAGAATATGCCGAGCGC
CTGGAAAAGACACGGCGTGC

Product: ectoine utilization protein EutC

Products: NA

Alternate protein names: OCD 1 [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNRMIILTEAELRVIVGLDPDAVACVEQAFAALATKAVAMPPILRLDIPEYRGEVDVKTAYIPGIEGFAIKISPGFFDNP
RIGLPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVAAKHLSRQNSNVAAIFGAGMQARLQLEALTLVRPIREA
RIWARDTAKAKGVAAELAARLGFPVKAKSDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAA
IAGAGLYVPDSLKQTRRLGELHHAIEAGLVERDADFAELGRIVAGRMPGRTGDDQITIADLTGTGIQDTAIATLAFARAG
AANAGTTFES

Sequences:

>Translated_330_residues
MNRMIILTEAELRVIVGLDPDAVACVEQAFAALATKAVAMPPILRLDIPEYRGEVDVKTAYIPGIEGFAIKISPGFFDNP
RIGLPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVAAKHLSRQNSNVAAIFGAGMQARLQLEALTLVRPIREA
RIWARDTAKAKGVAAELAARLGFPVKAKSDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAA
IAGAGLYVPDSLKQTRRLGELHHAIEAGLVERDADFAELGRIVAGRMPGRTGDDQITIADLTGTGIQDTAIATLAFARAG
AANAGTTFES
>Mature_330_residues
MNRMIILTEAELRVIVGLDPDAVACVEQAFAALATKAVAMPPILRLDIPEYRGEVDVKTAYIPGIEGFAIKISPGFFDNP
RIGLPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAGAVAAKHLSRQNSNVAAIFGAGMQARLQLEALTLVRPIREA
RIWARDTAKAKGVAAELAARLGFPVKAKSDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAA
IAGAGLYVPDSLKQTRRLGELHHAIEAGLVERDADFAELGRIVAGRMPGRTGDDQITIADLTGTGIQDTAIATLAFARAG
AANAGTTFES

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=281, Percent_Identity=29.1814946619217, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI4503065, Length=281, Percent_Identity=29.1814946619217, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24642678, Length=291, Percent_Identity=28.1786941580756, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014334
- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34735; Mature: 34735

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRMIILTEAELRVIVGLDPDAVACVEQAFAALATKAVAMPPILRLDIPEYRGEVDVKTA
CCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCEEEEEE
YIPGIEGFAIKISPGFFDNPRIGLPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAG
ECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEHHHHHHHH
AVAAKHLSRQNSNVAAIFGAGMQARLQLEALTLVRPIREARIWARDTAKAKGVAAELAAR
HHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LGFPVKAKSDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAA
CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCHHH
IAGAGLYVPDSLKQTRRLGELHHAIEAGLVERDADFAELGRIVAGRMPGRTGDDQITIAD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
LTGTGIQDTAIATLAFARAGAANAGTTFES
ECCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNRMIILTEAELRVIVGLDPDAVACVEQAFAALATKAVAMPPILRLDIPEYRGEVDVKTA
CCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCEEEEEE
YIPGIEGFAIKISPGFFDNPRIGLPSTNGMMVLLSSRTGLVQALLLDNGYLTDVRTAAAG
ECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEHHHHHHHH
AVAAKHLSRQNSNVAAIFGAGMQARLQLEALTLVRPIREARIWARDTAKAKGVAAELAAR
HHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LGFPVKAKSDPRQAMSGADIVVTTTPAEKPIIDAGWLEPGQHLTAMGSDAEHKNEIDPAA
CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCHHH
IAGAGLYVPDSLKQTRRLGELHHAIEAGLVERDADFAELGRIVAGRMPGRTGDDQITIAD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
LTGTGIQDTAIATLAFARAGAANAGTTFES
ECCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]