Click here to switch to the map view.

The map label for this gene is yciE [H]

Identifier: 86360792

GI number: 86360792

Start: 59245

End: 59757

Strand: Reverse

Name: yciE [H]

Synonym: RHE_PF00058

Alternate gene names: 86360792

Gene position: 59757-59245 (Counterclockwise)

Preceding gene: 86360796

Following gene: 86360791

Centisome position: 9.3

GC content: 56.14

Gene sequence:

>513_bases
ATGCCAGAGAAGGAAATTCGTGACGTCTTCGTCGTTGGACTGAGGAATGCACATGCGATGGAAAACCAGGCGCTCAGCAT
CATGAAGCCCCAATTGAAACGGATCGACAATTACCCGGAGGTCGCAGCAAAACTAGATCAGCATATCCGCGAGACTGAAG
GGCAGATCAATCGCTTGGAGGAGATTCTCGACGGTCTTAACGAGGACAAGTCGACGCTGAAGGACTTGGCGCTGTCGTTC
ACCGGATCGATGGCAGCGCTTGGCCACACGGTCGCCGGCGACGAAATACTGAAGAACGCCTTTGCCAATTTTGCTTTCGA
GCACTACGAAGCGGCGGCTTACAAGTCGCTGCTGGCAGTTTCCGAGGCGGGTGGATACGGCGCCGCCATGACCGGGCTTC
AGGCCAATCTGGCAGAGGAGTTGGCGATGGCGGAATGGATCAACGACAATCTCGCCGCTCTGACGAAGAAGTTCCTCTCG
CTGCGCGAGGCAGGTGAGACGGCAAAGGTTTGA

Upstream 100 bases:

>100_bases
GACGGTTCCCATAATCGAAGACAGTTGCAGTCAACCTTTTAAACGCGGGAACCAGGAGGAGTCGTTGCGGTTAGGGACTT
TCAAACAAAGGAGGCCAGCT

Downstream 100 bases:

>100_bases
GAACAATAGGCGGACGGAATGAGCGTCCTGACGGCGATCGCCTGTCGAACGATGTCATCGTCAACGCCGTCTTTGTCGAC
CCCACCGGCAAGTCCTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MPEKEIRDVFVVGLRNAHAMENQALSIMKPQLKRIDNYPEVAAKLDQHIRETEGQINRLEEILDGLNEDKSTLKDLALSF
TGSMAALGHTVAGDEILKNAFANFAFEHYEAAAYKSLLAVSEAGGYGAAMTGLQANLAEELAMAEWINDNLAALTKKFLS
LREAGETAKV

Sequences:

>Translated_170_residues
MPEKEIRDVFVVGLRNAHAMENQALSIMKPQLKRIDNYPEVAAKLDQHIRETEGQINRLEEILDGLNEDKSTLKDLALSF
TGSMAALGHTVAGDEILKNAFANFAFEHYEAAAYKSLLAVSEAGGYGAAMTGLQANLAEELAMAEWINDNLAALTKKFLS
LREAGETAKV
>Mature_169_residues
PEKEIRDVFVVGLRNAHAMENQALSIMKPQLKRIDNYPEVAAKLDQHIRETEGQINRLEEILDGLNEDKSTLKDLALSFT
GSMAALGHTVAGDEILKNAFANFAFEHYEAAAYKSLLAVSEAGGYGAAMTGLQANLAEELAMAEWINDNLAALTKKFLSL
REAGETAKV

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787511, Length=150, Percent_Identity=43.3333333333333, Blast_Score=122, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18580; Mature: 18449

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKEIRDVFVVGLRNAHAMENQALSIMKPQLKRIDNYPEVAAKLDQHIRETEGQINRLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EILDGLNEDKSTLKDLALSFTGSMAALGHTVAGDEILKNAFANFAFEHYEAAAYKSLLAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEAGGYGAAMTGLQANLAEELAMAEWINDNLAALTKKFLSLREAGETAKV
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PEKEIRDVFVVGLRNAHAMENQALSIMKPQLKRIDNYPEVAAKLDQHIRETEGQINRLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
EILDGLNEDKSTLKDLALSFTGSMAALGHTVAGDEILKNAFANFAFEHYEAAAYKSLLAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEAGGYGAAMTGLQANLAEELAMAEWINDNLAALTKKFLSLREAGETAKV
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]