Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360796
Identifier: 86360796
GI number: 86360796
Start: 62408
End: 62710
Strand: Reverse
Name: 86360796
Synonym: RHE_PF00062
Alternate gene names: NA
Gene position: 62710-62408 (Counterclockwise)
Preceding gene: 86360797
Following gene: 86360792
Centisome position: 9.76
GC content: 59.41
Gene sequence:
>303_bases ATGCTCGATTCTCAGTCCATCCATCTGAAAGCGCTTGATTCAACCGATCTTCAGCGTCTGCAGACCGTTTTGAATGTGAT CGGCCGCGAGGCCGACATGCCCTTGCGCTCGCCTGACATGCAGGAGGTCGCCGCGCTGCTCATTCGCCTTTATCGCCACG GCTTGACCGACGAGGACAAGCTGTTGTCTGTCGGGCGTTTGGCGTCGGCGAAAAAGGGGCTCTGCCCAACTGCTGCAATC ACGGCGGGGCGGAGATCGAAACGACCGGCCGGTCATCTCAGTCTGACGAGGAGCAGCTCATGA
Upstream 100 bases:
>100_bases TCGACTGTTCAGTTCCGTACAATTGGGGACGAAGAGTTGTTTCAGCCCCAATTGAGTCCCATTATTCAAAACGCACGGTG AAAGCTTCGGGACCAGGGTC
Downstream 100 bases:
>100_bases ACGACGGTGAAAAAGCGCGGGCCGACGTCGAAGGAACCGATAAGGAAACCGCGGATGCGAGGAAAAACCCGCCGGCCGGT CCTCACGCCAAGGATCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MLDSQSIHLKALDSTDLQRLQTVLNVIGREADMPLRSPDMQEVAALLIRLYRHGLTDEDKLLSVGRLASAKKGLCPTAAI TAGRRSKRPAGHLSLTRSSS
Sequences:
>Translated_100_residues MLDSQSIHLKALDSTDLQRLQTVLNVIGREADMPLRSPDMQEVAALLIRLYRHGLTDEDKLLSVGRLASAKKGLCPTAAI TAGRRSKRPAGHLSLTRSSS >Mature_100_residues MLDSQSIHLKALDSTDLQRLQTVLNVIGREADMPLRSPDMQEVAALLIRLYRHGLTDEDKLLSVGRLASAKKGLCPTAAI TAGRRSKRPAGHLSLTRSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10891; Mature: 10891
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDSQSIHLKALDSTDLQRLQTVLNVIGREADMPLRSPDMQEVAALLIRLYRHGLTDEDK CCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH LLSVGRLASAKKGLCPTAAITAGRRSKRPAGHLSLTRSSS HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MLDSQSIHLKALDSTDLQRLQTVLNVIGREADMPLRSPDMQEVAALLIRLYRHGLTDEDK CCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH LLSVGRLASAKKGLCPTAAITAGRRSKRPAGHLSLTRSSS HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA