| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859351
Identifier: 85859351
GI number: 85859351
Start: 1547922
End: 1548311
Strand: Direct
Name: 85859351
Synonym: SYN_03061
Alternate gene names: NA
Gene position: 1547922-1548311 (Clockwise)
Preceding gene: 85859350
Following gene: 85859352
Centisome position: 48.69
GC content: 52.82
Gene sequence:
>390_bases TTGATGCGTACAGAGAACAAAGGCAGGCGAAATGAGTGCGGTTTTACACTTATTGAACTGATGATTGTCATCGCGATTCT TGGGGTGCTTGCAACGATCGCCGTTCCCCGGTTTCTCGTTTATCGTCAGAGCGCCTGTGATTCACAGGCAAAGACGGATG CCAGAAACTTTTATACGGCTTCCATGTCCGATGCGATCGACAGCAGCGGGGATAAGACTTTCAACAGCACAAATCCACCT CCCAGTTATCGGGGGCTTTCTCCCGTCAGCGGGTCATTCGTTTTTATGGCCGCCACTCATACCGCGACCTGCGATGCGGC CTTCAAGCATCCGCAGGGGTCAAAGACCTTCACTCTCAATTCGGAAGGCCGTATCACCGCCTTCCCCTGA
Upstream 100 bases:
>100_bases GTACGGATGCAATCGTTTTTATGGATTTTAAAATGCATTATAGTGTAGAGTAAAATGAGTTATCAGTAGAAGTGATGGAA TTAATTACCAAAAGGGATGC
Downstream 100 bases:
>100_bases GGCATGCCTTTCGCGCCGTTGTTCGCAGATTCAAAATATAATTTGATCGAAGTGATGCCGAACGTTGACAATGCTCAATA GTTATGGAAAATTTCCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTASMSDAIDSSGDKTFNSTNPP PSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLNSEGRITAFP
Sequences:
>Translated_129_residues MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTASMSDAIDSSGDKTFNSTNPP PSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLNSEGRITAFP >Mature_129_residues MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTASMSDAIDSSGDKTFNSTNPP PSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLNSEGRITAFP
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13995; Mature: 13995
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEC SMSDAIDSSGDKTFNSTNPPPSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLN CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEEEC SEGRITAFP CCCCEEECC >Mature Secondary Structure MMRTENKGRRNECGFTLIELMIVIAILGVLATIAVPRFLVYRQSACDSQAKTDARNFYTA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEC SMSDAIDSSGDKTFNSTNPPPSYRGLSPVSGSFVFMAATHTATCDAAFKHPQGSKTFTLN CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEEEC SEGRITAFP CCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA