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The map label for this gene is 85859352

Identifier: 85859352

GI number: 85859352

Start: 1548376

End: 1549089

Strand: Direct

Name: 85859352

Synonym: SYN_03060

Alternate gene names: NA

Gene position: 1548376-1549089 (Clockwise)

Preceding gene: 85859351

Following gene: 85859353

Centisome position: 48.7

GC content: 52.24

Gene sequence:

>714_bases
TTGACAATGCTCAATAGTTATGGAAAATTTCCAGTCACATTCCTCAAAGAGAAGAGTTCGGACGTGAGGGAGAAGGGGAT
GCAGAGACTCAGGAGCGCCATAACCGGTTTTTTGATCGCAATGACATGCTTTTTCTGCATGACAGTGGATTTGATGGCTG
AGAACCGTTTTTTTCCTGAAGAGATTGTCGAAGGGGTCGCCCCGATATACACGGCGCCCCCCATTCCAGAGGGACTTCAG
TATGCGAAATCCGGAAGCAGGGGAGAGGCGCCCGGAGAGAGCGAGAACTGGAAGCGCCGTCCGGAGGTTGTCGTCTCTTG
GGGTGACGAACCAACCCGGGTGAAGATCATGGGAAACTCAGTTCTTGTTCCCGCTACACTTGCGCACGGCGGCAATGAAA
TCGATGTTTATCTCCTGCTGGATACAGGCTCTACGGGAACGGCGATCCATTCCGACATTGCCGATCAGTTGGCCATCAAT
CTGGATCAGGCGGCAAGGACCAAAGTGCAGGTCGTCGGGGGAGGAGTCCTCAACGCCCGCGTGGTCAGGATAGGTCGTTT
GACTGTCGGGCCGCATACGAAACGCAATTGGAACATTTTTGTCGTCCCTCATAAAAGTTCGGCTGCACGATATGATGGAC
TGCTCGGGATGGATGTCCTGCGCGGGTTGAAGTATGAAGTGGATTTTAAAAAGCAGCTTATCATCTGGCAATAA

Upstream 100 bases:

>100_bases
CTCAATTCGGAAGGCCGTATCACCGCCTTCCCCTGAGGCATGCCTTTCGCGCCGTTGTTCGCAGATTCAAAATATAATTT
GATCGAAGTGATGCCGAACG

Downstream 100 bases:

>100_bases
ATCTTATCGTAATGACAATACCGAGTTTTATTTCGGGCAAAAAATATCATCTCATAATCTGGACTTAAGGTTCAGTCAAC
ATTGCTGGTACAGGAAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: Retropepsin Family Aspartate Protease

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTMLNSYGKFPVTFLKEKSSDVREKGMQRLRSAITGFLIAMTCFFCMTVDLMAENRFFPEEIVEGVAPIYTAPPIPEGLQ
YAKSGSRGEAPGESENWKRRPEVVVSWGDEPTRVKIMGNSVLVPATLAHGGNEIDVYLLLDTGSTGTAIHSDIADQLAIN
LDQAARTKVQVVGGGVLNARVVRIGRLTVGPHTKRNWNIFVVPHKSSAARYDGLLGMDVLRGLKYEVDFKKQLIIWQ

Sequences:

>Translated_237_residues
MTMLNSYGKFPVTFLKEKSSDVREKGMQRLRSAITGFLIAMTCFFCMTVDLMAENRFFPEEIVEGVAPIYTAPPIPEGLQ
YAKSGSRGEAPGESENWKRRPEVVVSWGDEPTRVKIMGNSVLVPATLAHGGNEIDVYLLLDTGSTGTAIHSDIADQLAIN
LDQAARTKVQVVGGGVLNARVVRIGRLTVGPHTKRNWNIFVVPHKSSAARYDGLLGMDVLRGLKYEVDFKKQLIIWQ
>Mature_236_residues
TMLNSYGKFPVTFLKEKSSDVREKGMQRLRSAITGFLIAMTCFFCMTVDLMAENRFFPEEIVEGVAPIYTAPPIPEGLQY
AKSGSRGEAPGESENWKRRPEVVVSWGDEPTRVKIMGNSVLVPATLAHGGNEIDVYLLLDTGSTGTAIHSDIADQLAINL
DQAARTKVQVVGGGVLNARVVRIGRLTVGPHTKRNWNIFVVPHKSSAARYDGLLGMDVLRGLKYEVDFKKQLIIWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26182; Mature: 26050

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLNSYGKFPVTFLKEKSSDVREKGMQRLRSAITGFLIAMTCFFCMTVDLMAENRFFPE
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EIVEGVAPIYTAPPIPEGLQYAKSGSRGEAPGESENWKRRPEVVVSWGDEPTRVKIMGNS
HHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCC
VLVPATLAHGGNEIDVYLLLDTGSTGTAIHSDIADQLAINLDQAARTKVQVVGGGVLNAR
EEEEEHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHCEEEEEECCCEEEEE
VVRIGRLTVGPHTKRNWNIFVVPHKSSAARYDGLLGMDVLRGLKYEVDFKKQLIIWQ
EEEEEEEEECCCCCCCCEEEEEECCCCCHHHCCCCCHHHHCCCCEEECCCCEEEEEC
>Mature Secondary Structure 
TMLNSYGKFPVTFLKEKSSDVREKGMQRLRSAITGFLIAMTCFFCMTVDLMAENRFFPE
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EIVEGVAPIYTAPPIPEGLQYAKSGSRGEAPGESENWKRRPEVVVSWGDEPTRVKIMGNS
HHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCC
VLVPATLAHGGNEIDVYLLLDTGSTGTAIHSDIADQLAINLDQAARTKVQVVGGGVLNAR
EEEEEHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHCEEEEEECCCEEEEE
VVRIGRLTVGPHTKRNWNIFVVPHKSSAARYDGLLGMDVLRGLKYEVDFKKQLIIWQ
EEEEEEEEECCCCCCCCEEEEEECCCCCHHHCCCCCHHHHCCCCEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA