| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is phoU [H]
Identifier: 85859337
GI number: 85859337
Start: 1532959
End: 1533657
Strand: Direct
Name: phoU [H]
Synonym: SYN_00060
Alternate gene names: 85859337
Gene position: 1532959-1533657 (Clockwise)
Preceding gene: 85859336
Following gene: 85859338
Centisome position: 48.22
GC content: 51.93
Gene sequence:
>699_bases ATGGCAAACCAGAGACATACGAGCAGACATTATGAGAAGGAGCTTCAGGAGCTCAAGGAGGGGTTGCTTTATCTGGGGGG GCTGACGGAGAGGGCCATCGAAAATGCCCTGCAGGCCCTGCTGGGCAGGGATTCTGAACTGGCGCGGAAGGTTATTGCCG ACGACAACGCCATCGATCAGCTTGATTCGGAAAATGAAGAGCGATGCATCCGCATCCTGGCATTGCGGCAGCCGGCGGCG AGAGATTTGCGCTTTATCGCGACGGCAATCAAGATCAACGGCCATCTGGAACGGATCGGAGACATGGCGGTCAACATCGC CGAGAAGGTTCTGCTGCTGAATGAAGAACCTCAGTTGAAACCCTATATCGATATTCCCCGCATGGGGGAGATCGTTCAGA GGATGATCCGTCAAAGTATGGATGCCCTGGTTAATGAAAATGTCGAACTGGCTGATCAGGTTCGTAAAGATGATGAAATT GTTGATGAACTGACAGAACAGGTTTTTCGGGAACTTCTCACCTTCATGATAGAAAATCCCCGGACAATTAAAGTGGCGCT GCTGATCATGCAGATTTCCAAGAACCTGGAACGGATAGCCGACCATGCGGAAGGAATTGCCGATATGGTGATTTACATGG TGACGGGGAAAAGCGTGCGTCACGATTCCTCCACGGAACCCAAGGGGCGGATGGCTTGA
Upstream 100 bases:
>100_bases TTTTCACCAATCCGGAACAGAAGCAGACGGAAGACTACATCACGGGGCGATTCGGATAGGCCGCGGCAATCTGCCGCTTC ACTTCAGACACGGGGGGATC
Downstream 100 bases:
>100_bases AACCAAAACTATTTCTCCGGATCCTGTTCAGCTATTTCGCGGTAATCCTGCTGGTAGCGGTGATTGTGGGCTTCTTTTTC ACCGAACAGGTTCGCCGGAA
Product: phosphate transport system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MANQRHTSRHYEKELQELKEGLLYLGGLTERAIENALQALLGRDSELARKVIADDNAIDQLDSENEERCIRILALRQPAA RDLRFIATAIKINGHLERIGDMAVNIAEKVLLLNEEPQLKPYIDIPRMGEIVQRMIRQSMDALVNENVELADQVRKDDEI VDELTEQVFRELLTFMIENPRTIKVALLIMQISKNLERIADHAEGIADMVIYMVTGKSVRHDSSTEPKGRMA
Sequences:
>Translated_232_residues MANQRHTSRHYEKELQELKEGLLYLGGLTERAIENALQALLGRDSELARKVIADDNAIDQLDSENEERCIRILALRQPAA RDLRFIATAIKINGHLERIGDMAVNIAEKVLLLNEEPQLKPYIDIPRMGEIVQRMIRQSMDALVNENVELADQVRKDDEI VDELTEQVFRELLTFMIENPRTIKVALLIMQISKNLERIADHAEGIADMVIYMVTGKSVRHDSSTEPKGRMA >Mature_231_residues ANQRHTSRHYEKELQELKEGLLYLGGLTERAIENALQALLGRDSELARKVIADDNAIDQLDSENEERCIRILALRQPAAR DLRFIATAIKINGHLERIGDMAVNIAEKVLLLNEEPQLKPYIDIPRMGEIVQRMIRQSMDALVNENVELADQVRKDDEIV DELTEQVFRELLTFMIENPRTIKVALLIMQISKNLERIADHAEGIADMVIYMVTGKSVRHDSSTEPKGRMA
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=217, Percent_Identity=30.4147465437788, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26466; Mature: 26335
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQRHTSRHYEKELQELKEGLLYLGGLTERAIENALQALLGRDSELARKVIADDNAIDQ CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH LDSENEERCIRILALRQPAARDLRFIATAIKINGHLERIGDMAVNIAEKVLLLNEEPQLK HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PYIDIPRMGEIVQRMIRQSMDALVNENVELADQVRKDDEIVDELTEQVFRELLTFMIENP CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC RTIKVALLIMQISKNLERIADHAEGIADMVIYMVTGKSVRHDSSTEPKGRMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANQRHTSRHYEKELQELKEGLLYLGGLTERAIENALQALLGRDSELARKVIADDNAIDQ CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH LDSENEERCIRILALRQPAARDLRFIATAIKINGHLERIGDMAVNIAEKVLLLNEEPQLK HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PYIDIPRMGEIVQRMIRQSMDALVNENVELADQVRKDDEIVDELTEQVFRELLTFMIENP CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC RTIKVALLIMQISKNLERIADHAEGIADMVIYMVTGKSVRHDSSTEPKGRMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]