| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is yqgI [H]
Identifier: 85859335
GI number: 85859335
Start: 1531278
End: 1532153
Strand: Direct
Name: yqgI [H]
Synonym: SYN_00058
Alternate gene names: 85859335
Gene position: 1531278-1532153 (Clockwise)
Preceding gene: 85859334
Following gene: 85859336
Centisome position: 48.16
GC content: 54.45
Gene sequence:
>876_bases TTGGTAAAAATTATCATGAAATGGAAATGGCGTTATATTAAGCAGAATCTTTTTATGGGTGCGGTTTCTCTATGCGCCCT TCTGATCATTCTTGCCCTGGGTGGAATACTCTTTTATATTTTCAGCAACGGCCTTCAGGCGATCAACTGGGAATTCCTGA CCAGCCCCCCTCGTGATTCCATGACCCGAGGGGGCATCATGCCGGCGATTCTCGGGACCCTGTACCTTACGCTGGGGGCG ATTACGGTGGCCCTGCCGCTGGGCATCGCCTCGGCGGTTTATCTGACGGAATACGCGCGTCAGGGGCTGATAATCCGGAT TATCCGCCTGGGGGTGAACTGTCTTGCCGGTATTCCTTCCGTGGTTTTCGGACTGTTCGGCCTGGGTTTTTTTGTCGTTT TCCTGCAATTCGGATCATGCATTCTCTCCGGAGCGCTGACCCTGGGATTCCTTGTCCTGCCGACCATTATCGGGGCATCT GAGGAAGCGCTCAAAGCTGTTCCTCAGACCTTCCGGGAAGCGTCACTGGCCTTGGGCGTTTCCAAATGGCGCACCATATC TCGGATTGTCCTGCCAAACGCCCTGCCGGGAATTCTGACCGGTTCCATTCTGGGAATAGGACGCGCCGCCGGTGAAACGG CGCCGATCATGTTCACGGCTGCCGCGTTTTTCACCGCGAAGCTGCCTTCGTCAATTTTCGACGAGGTGATGGCCTTACCC TACCATATTTATGTTCTGGCAACGGCCGGAACCCGGATCGAGGAAACCCGTCCCCTTCAGTTCGGAACGGCCCTTGTTCT GATGGCGCTGGTTCTGGGAATCGACCTGTTCGCAATCATCATTCGAAGCCGTATGCGCAAAAAGAAAAGGTGGTAA
Upstream 100 bases:
>100_bases ACAGGGATCATCCTGTTTTTTGTGACTCTTCTGTTCAATATGATTGCAGACTACGTCTCCCAACGCTTCAAGCAGGTAGG GTCGGCCACGCTGTAGCTTT
Downstream 100 bases:
>100_bases CATTGGATACACAATCGATTATTCGAACCGTGAACGTCAATTTCTACTACGGCCGGTTTCAGGCCTTGACCGACATCACC ATGGATTTTCAAAAAAACCG
Product: phosphate ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MVKIIMKWKWRYIKQNLFMGAVSLCALLIILALGGILFYIFSNGLQAINWEFLTSPPRDSMTRGGIMPAILGTLYLTLGA ITVALPLGIASAVYLTEYARQGLIIRIIRLGVNCLAGIPSVVFGLFGLGFFVVFLQFGSCILSGALTLGFLVLPTIIGAS EEALKAVPQTFREASLALGVSKWRTISRIVLPNALPGILTGSILGIGRAAGETAPIMFTAAAFFTAKLPSSIFDEVMALP YHIYVLATAGTRIEETRPLQFGTALVLMALVLGIDLFAIIIRSRMRKKKRW
Sequences:
>Translated_291_residues MVKIIMKWKWRYIKQNLFMGAVSLCALLIILALGGILFYIFSNGLQAINWEFLTSPPRDSMTRGGIMPAILGTLYLTLGA ITVALPLGIASAVYLTEYARQGLIIRIIRLGVNCLAGIPSVVFGLFGLGFFVVFLQFGSCILSGALTLGFLVLPTIIGAS EEALKAVPQTFREASLALGVSKWRTISRIVLPNALPGILTGSILGIGRAAGETAPIMFTAAAFFTAKLPSSIFDEVMALP YHIYVLATAGTRIEETRPLQFGTALVLMALVLGIDLFAIIIRSRMRKKKRW >Mature_291_residues MVKIIMKWKWRYIKQNLFMGAVSLCALLIILALGGILFYIFSNGLQAINWEFLTSPPRDSMTRGGIMPAILGTLYLTLGA ITVALPLGIASAVYLTEYARQGLIIRIIRLGVNCLAGIPSVVFGLFGLGFFVVFLQFGSCILSGALTLGFLVLPTIIGAS EEALKAVPQTFREASLALGVSKWRTISRIVLPNALPGILTGSILGIGRAAGETAPIMFTAAAFFTAKLPSSIFDEVMALP YHIYVLATAGTRIEETRPLQFGTALVLMALVLGIDLFAIIIRSRMRKKKRW
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=237, Percent_Identity=33.7552742616034, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1790164, Length=229, Percent_Identity=30.1310043668122, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31558; Mature: 31558
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIIMKWKWRYIKQNLFMGAVSLCALLIILALGGILFYIFSNGLQAINWEFLTSPPRDS CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCH MTRGGIMPAILGTLYLTLGAITVALPLGIASAVYLTEYARQGLIIRIIRLGVNCLAGIPS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VVFGLFGLGFFVVFLQFGSCILSGALTLGFLVLPTIIGASEEALKAVPQTFREASLALGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SKWRTISRIVLPNALPGILTGSILGIGRAAGETAPIMFTAAAFFTAKLPSSIFDEVMALP HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC YHIYVLATAGTRIEETRPLQFGTALVLMALVLGIDLFAIIIRSRMRKKKRW HHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKIIMKWKWRYIKQNLFMGAVSLCALLIILALGGILFYIFSNGLQAINWEFLTSPPRDS CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCH MTRGGIMPAILGTLYLTLGAITVALPLGIASAVYLTEYARQGLIIRIIRLGVNCLAGIPS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VVFGLFGLGFFVVFLQFGSCILSGALTLGFLVLPTIIGASEEALKAVPQTFREASLALGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SKWRTISRIVLPNALPGILTGSILGIGRAAGETAPIMFTAAAFFTAKLPSSIFDEVMALP HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC YHIYVLATAGTRIEETRPLQFGTALVLMALVLGIDLFAIIIRSRMRKKKRW HHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]