Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yqgH [H]

Identifier: 85859334

GI number: 85859334

Start: 1530386

End: 1531273

Strand: Direct

Name: yqgH [H]

Synonym: SYN_00057

Alternate gene names: 85859334

Gene position: 1530386-1531273 (Clockwise)

Preceding gene: 85859333

Following gene: 85859335

Centisome position: 48.14

GC content: 55.29

Gene sequence:

>888_bases
ATGACCCGGCAAGGAAAAGAAAAGATCATCAAAGGGCTGTTTCTCCTGATCGCTTTCGTATCCATTCTTATTCTCGGGCT
GATCGTGGTCTCTCTTTTCCGTGAAGGGTTGCCCATCTTCCGGGAAGTGTCTGTTACGGGATTTCTTTTAGGCAGAGAAT
GGTATCCCACCTACGAACCGCCGGAATACGGAATCTGGCCGTTGATTGTGGGGTCCCTGATCGTCACGTTCTTTTCCTCG
CTGATCGCAGTGCCACTGGGGGTGCTGTCCGCGATTTTCATCGCTGAGATAGCCCCTCTCTCCATCCGGGAAATTTTGAA
ATCGGCGATCGAACTTCTGGCCGGTCTGCCTTCCGTGGTGCTGGGATTTTTCGGTATGGTGATTCTGGCGCCGTGGCTGC
AGGAGACTTTTGATCTGCCAACGGGGCTGAACATCGTCAACGCCTCGCTCATGCTCGCCATCATGGCGATTCCAACCATT
TCCAGCATTTCTGAGGATGCCCTTTACGCGGTTTCCCAGGAATTCAAGGAAGCGTCCTATGCCCTTGGGGCGACGCGATT
TGAGACAATCACCCGCGTGATTGTTCCGGCGGCCCTGTCCGGTATTTCGACGGCTGTTATTCTGGGCATGGCTCGAGCGA
TGGGGGAAACCATGGTCGTCTTGATGGTGGCGGGCGGCGCGGCGGCCATTCCGGAAAGCATCTTTGACCCGGTGCGGCCC
ATGCCGGCAAGCATTGCTGCGGAAATGGGGGAGGCGCCTTTCCGCAGCGGTCATTATCACGCCCTGTATGCCACAGGGAT
CATCCTGTTTTTTGTGACTCTTCTGTTCAATATGATTGCAGACTACGTCTCCCAACGCTTCAAGCAGGTAGGGTCGGCCA
CGCTGTAG

Upstream 100 bases:

>100_bases
CGCAGGGCAGCAACTTGTGGCGAAGGATGGATTTGTGCCGGTGAAGGCCCCGGCAAAGGGTAATGCCAAAAAGGTCAAGA
AGTAAGAAAGGAAAGGAAGA

Downstream 100 bases:

>100_bases
CTTTTTGGTAAAAATTATCATGAAATGGAAATGGCGTTATATTAAGCAGAATCTTTTTATGGGTGCGGTTTCTCTATGCG
CCCTTCTGATCATTCTTGCC

Product: phosphate ABC transporter permease

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTRQGKEKIIKGLFLLIAFVSILILGLIVVSLFREGLPIFREVSVTGFLLGREWYPTYEPPEYGIWPLIVGSLIVTFFSS
LIAVPLGVLSAIFIAEIAPLSIREILKSAIELLAGLPSVVLGFFGMVILAPWLQETFDLPTGLNIVNASLMLAIMAIPTI
SSISEDALYAVSQEFKEASYALGATRFETITRVIVPAALSGISTAVILGMARAMGETMVVLMVAGGAAAIPESIFDPVRP
MPASIAAEMGEAPFRSGHYHALYATGIILFFVTLLFNMIADYVSQRFKQVGSATL

Sequences:

>Translated_295_residues
MTRQGKEKIIKGLFLLIAFVSILILGLIVVSLFREGLPIFREVSVTGFLLGREWYPTYEPPEYGIWPLIVGSLIVTFFSS
LIAVPLGVLSAIFIAEIAPLSIREILKSAIELLAGLPSVVLGFFGMVILAPWLQETFDLPTGLNIVNASLMLAIMAIPTI
SSISEDALYAVSQEFKEASYALGATRFETITRVIVPAALSGISTAVILGMARAMGETMVVLMVAGGAAAIPESIFDPVRP
MPASIAAEMGEAPFRSGHYHALYATGIILFFVTLLFNMIADYVSQRFKQVGSATL
>Mature_294_residues
TRQGKEKIIKGLFLLIAFVSILILGLIVVSLFREGLPIFREVSVTGFLLGREWYPTYEPPEYGIWPLIVGSLIVTFFSSL
IAVPLGVLSAIFIAEIAPLSIREILKSAIELLAGLPSVVLGFFGMVILAPWLQETFDLPTGLNIVNASLMLAIMAIPTIS
SISEDALYAVSQEFKEASYALGATRFETITRVIVPAALSGISTAVILGMARAMGETMVVLMVAGGAAAIPESIFDPVRPM
PASIAAEMGEAPFRSGHYHALYATGIILFFVTLLFNMIADYVSQRFKQVGSATL

Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0573

COG function: function code P; ABC-type phosphate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790164, Length=297, Percent_Identity=32.3232323232323, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1790163, Length=222, Percent_Identity=27.027027027027, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011864 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31779; Mature: 31648

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQGKEKIIKGLFLLIAFVSILILGLIVVSLFREGLPIFREVSVTGFLLGREWYPTYEP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCC
PEYGIWPLIVGSLIVTFFSSLIAVPLGVLSAIFIAEIAPLSIREILKSAIELLAGLPSVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
LGFFGMVILAPWLQETFDLPTGLNIVNASLMLAIMAIPTISSISEDALYAVSQEFKEASY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGATRFETITRVIVPAALSGISTAVILGMARAMGETMVVLMVAGGAAAIPESIFDPVRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCHHHHCCCCC
MPASIAAEMGEAPFRSGHYHALYATGIILFFVTLLFNMIADYVSQRFKQVGSATL
CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRQGKEKIIKGLFLLIAFVSILILGLIVVSLFREGLPIFREVSVTGFLLGREWYPTYEP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCC
PEYGIWPLIVGSLIVTFFSSLIAVPLGVLSAIFIAEIAPLSIREILKSAIELLAGLPSVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
LGFFGMVILAPWLQETFDLPTGLNIVNASLMLAIMAIPTISSISEDALYAVSQEFKEASY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGATRFETITRVIVPAALSGISTAVILGMARAMGETMVVLMVAGGAAAIPESIFDPVRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCHHHHCCCCC
MPASIAAEMGEAPFRSGHYHALYATGIILFFVTLLFNMIADYVSQRFKQVGSATL
CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760913; 8969508; 9384377 [H]